Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU1208

Experiment: MoLS4 with L-Cysteine 1mM as (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntfabH and plsX are separated by 56 nucleotidesplsX and rpmF overlap by 8 nucleotidesrpmF and DVU1210 are separated by 44 nucleotidesDVU1210 and rpmB are separated by 202 nucleotides DVU1207: fabH - 3-oxoacyl-(acyl-carrier-protein) synthase III (TIGR), at 1,298,192 to 1,299,184 fabH DVU1208: plsX - fatty acid/phospholipid synthesis protein PlsX (TIGR), at 1,299,241 to 1,300,278 plsX DVU1209: rpmF - ribosomal protein L32 (TIGR), at 1,300,271 to 1,300,450 rpmF DVU1210: DVU1210 - conserved hypothetical protein (TIGR), at 1,300,495 to 1,301,031 DVU1210 DVU1211: rpmB - ribosomal protein L28 (TIGR), at 1,301,234 to 1,301,443 rpmB Position (kb) 1299 1300 1301Strain fitness (log2 ratio) -3 -2 -1 0 1at 1300.615 kb on - strand, within DVU1210at 1301.058 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction MoLS4 with L-Cysteine 1mM as (N)
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1,300,615 - DVU1210 0.22 -2.9
1,301,058 - -0.1

Or see this region's nucleotide sequence