Experiment: MoLS4 with L-Cysteine 1mM as (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt rplM and rpsI are separated by 18 nucleotides rpsI and aroK-2 are separated by 551 nucleotides aroK-2 and DVU2522 overlap by 8 nucleotides DVU2522 and DVU2523 are separated by 29 nucleotides
DVU2518: rplM - ribosomal protein L13 (TIGR), at 2,632,092 to 2,632,526
rplM
DVU2519: rpsI - ribosomal protein S9 (TIGR), at 2,632,545 to 2,632,937
rpsI
DVU2521: aroK-2 - shikimate kinase (TIGR), at 2,633,489 to 2,634,031
aroK-2
DVU2522: DVU2522 - hypothetical protein (TIGR), at 2,634,024 to 2,634,626
DVU2522
DVU2523: DVU2523 - lipoprotein, putative (TIGR), at 2,634,656 to 2,635,132
DVU2523
Position (kb)
2633
2634
2635 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2633.070 kb on + strand at 2633.073 kb on + strand at 2633.180 kb on + strand at 2633.225 kb on - strand at 2633.246 kb on - strand at 2633.281 kb on - strand at 2633.355 kb on - strand at 2633.401 kb on + strand at 2633.437 kb on - strand at 2634.073 kb on - strand at 2634.128 kb on + strand, within DVU2522 at 2634.243 kb on - strand, within DVU2522 at 2634.243 kb on - strand, within DVU2522 at 2634.271 kb on - strand, within DVU2522 at 2634.278 kb on + strand, within DVU2522 at 2634.286 kb on - strand, within DVU2522 at 2634.286 kb on - strand, within DVU2522 at 2634.322 kb on - strand, within DVU2522 at 2634.342 kb on - strand, within DVU2522 at 2634.371 kb on + strand, within DVU2522 at 2634.468 kb on - strand, within DVU2522 at 2634.468 kb on - strand, within DVU2522 at 2634.507 kb on - strand, within DVU2522 at 2634.509 kb on + strand, within DVU2522 at 2634.509 kb on + strand, within DVU2522 at 2634.517 kb on - strand, within DVU2522 at 2634.517 kb on - strand, within DVU2522 at 2634.530 kb on + strand, within DVU2522 at 2634.579 kb on + strand at 2634.587 kb on - strand at 2634.602 kb on + strand at 2634.610 kb on - strand at 2634.782 kb on + strand, within DVU2523 at 2634.800 kb on - strand, within DVU2523 at 2634.825 kb on - strand, within DVU2523 at 2634.907 kb on - strand, within DVU2523 at 2634.971 kb on - strand, within DVU2523
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Cysteine 1mM as (N) remove 2,633,070 + -3.1 2,633,073 + -0.4 2,633,180 + -1.1 2,633,225 - +0.2 2,633,246 - +0.4 2,633,281 - -0.4 2,633,355 - -0.2 2,633,401 + +0.8 2,633,437 - +0.6 2,634,073 - -0.2 2,634,128 + DVU2522 0.17 -0.3 2,634,243 - DVU2522 0.36 -0.3 2,634,243 - DVU2522 0.36 -0.8 2,634,271 - DVU2522 0.41 +0.0 2,634,278 + DVU2522 0.42 -0.5 2,634,286 - DVU2522 0.43 +0.5 2,634,286 - DVU2522 0.43 -0.1 2,634,322 - DVU2522 0.49 +0.8 2,634,342 - DVU2522 0.53 -0.5 2,634,371 + DVU2522 0.58 -0.6 2,634,468 - DVU2522 0.74 -0.3 2,634,468 - DVU2522 0.74 -0.5 2,634,507 - DVU2522 0.80 -0.1 2,634,509 + DVU2522 0.80 +1.0 2,634,509 + DVU2522 0.80 -0.7 2,634,517 - DVU2522 0.82 +1.4 2,634,517 - DVU2522 0.82 +0.2 2,634,530 + DVU2522 0.84 +1.8 2,634,579 + -0.2 2,634,587 - -0.6 2,634,602 + -0.4 2,634,610 - +0.6 2,634,782 + DVU2523 0.26 +0.6 2,634,800 - DVU2523 0.30 +0.0 2,634,825 - DVU2523 0.35 -0.2 2,634,907 - DVU2523 0.53 -3.0 2,634,971 - DVU2523 0.66 +0.6
Or see this region's nucleotide sequence