Experiment: MoLS4 with L-Cysteine 1mM as (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU1825 and DVU1826 are separated by 139 nucleotides DVU1826 and DVU1827 are separated by 127 nucleotides DVU1827 and gidA are separated by 2 nucleotides
DVU1825: DVU1825 - amidohydrolase family protein (TIGR), at 1,890,462 to 1,891,790
DVU1825
DVU1826: DVU1826 - hypothetical protein (TIGR), at 1,891,930 to 1,892,202
DVU1826
DVU1827: DVU1827 - acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase family protein (TIGR), at 1,892,330 to 1,893,553
DVU1827
DVU1828: gidA - glucose inhibited division protein A (TIGR), at 1,893,556 to 1,895,445
gidA
Position (kb)
1892
1893
1894 Strain fitness (log2 ratio)
-1
0
1
2
3 at 1891.339 kb on - strand, within DVU1825 at 1891.342 kb on + strand, within DVU1825 at 1891.351 kb on - strand, within DVU1825 at 1891.362 kb on - strand, within DVU1825 at 1891.399 kb on + strand, within DVU1825 at 1891.466 kb on - strand, within DVU1825 at 1891.534 kb on + strand, within DVU1825 at 1891.563 kb on + strand, within DVU1825 at 1891.584 kb on - strand, within DVU1825 at 1891.591 kb on + strand, within DVU1825 at 1891.685 kb on + strand at 1891.690 kb on + strand at 1891.775 kb on - strand at 1891.780 kb on - strand at 1892.356 kb on + strand at 1892.525 kb on + strand, within DVU1827 at 1892.586 kb on + strand, within DVU1827 at 1892.594 kb on - strand, within DVU1827 at 1892.694 kb on + strand, within DVU1827 at 1892.696 kb on + strand, within DVU1827 at 1892.974 kb on + strand, within DVU1827 at 1893.185 kb on + strand, within DVU1827 at 1893.185 kb on + strand, within DVU1827 at 1893.193 kb on - strand, within DVU1827 at 1893.434 kb on - strand at 1893.436 kb on + strand at 1893.496 kb on - strand at 1893.507 kb on + strand at 1893.531 kb on + strand at 1893.539 kb on - strand at 1893.597 kb on - strand at 1893.823 kb on + strand, within gidA at 1893.987 kb on + strand, within gidA at 1894.222 kb on + strand, within gidA at 1894.227 kb on - strand, within gidA at 1894.353 kb on - strand, within gidA at 1894.528 kb on + strand, within gidA
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Cysteine 1mM as (N) remove 1,891,339 - DVU1825 0.66 +0.0 1,891,342 + DVU1825 0.66 +0.1 1,891,351 - DVU1825 0.67 +0.4 1,891,362 - DVU1825 0.68 +0.2 1,891,399 + DVU1825 0.71 -0.0 1,891,466 - DVU1825 0.76 +0.5 1,891,534 + DVU1825 0.81 -0.0 1,891,563 + DVU1825 0.83 +0.3 1,891,584 - DVU1825 0.84 +0.1 1,891,591 + DVU1825 0.85 +0.9 1,891,685 + -0.2 1,891,690 + -0.6 1,891,775 - -0.3 1,891,780 - +0.4 1,892,356 + -0.1 1,892,525 + DVU1827 0.16 +0.2 1,892,586 + DVU1827 0.21 -0.0 1,892,594 - DVU1827 0.22 -0.0 1,892,694 + DVU1827 0.30 +0.5 1,892,696 + DVU1827 0.30 +0.2 1,892,974 + DVU1827 0.53 -0.7 1,893,185 + DVU1827 0.70 -0.3 1,893,185 + DVU1827 0.70 -0.4 1,893,193 - DVU1827 0.71 +0.1 1,893,434 - -0.7 1,893,436 + +0.5 1,893,496 - -1.1 1,893,507 + -0.3 1,893,531 + -1.1 1,893,539 - +0.9 1,893,597 - +2.8 1,893,823 + gidA DVU1828 0.14 +0.1 1,893,987 + gidA DVU1828 0.23 -0.0 1,894,222 + gidA DVU1828 0.35 +0.1 1,894,227 - gidA DVU1828 0.36 +1.8 1,894,353 - gidA DVU1828 0.42 -0.3 1,894,528 + gidA DVU1828 0.51 +1.3
Or see this region's nucleotide sequence