Experiment: MoLS4 with L-Cysteine 1mM as (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU1708 and hsdM are separated by 2 nucleotides hsdM and DVU1710 are separated by 12 nucleotides
DVU1708: DVU1708 - conserved hypothetical protein (TIGR), at 1,782,972 to 1,783,985
DVU1708
DVU1709: hsdM - type I restriction-modification system, M subunit (TIGR), at 1,783,988 to 1,785,508
hsdM
DVU1710: DVU1710 - conserved hypothetical protein (TIGR), at 1,785,521 to 1,786,099
DVU1710
Position (kb)
1783
1784
1785
1786 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1783.091 kb on - strand, within DVU1708 at 1783.170 kb on + strand, within DVU1708 at 1783.266 kb on - strand, within DVU1708 at 1783.296 kb on - strand, within DVU1708 at 1783.555 kb on + strand, within DVU1708 at 1783.665 kb on + strand, within DVU1708 at 1784.088 kb on - strand at 1784.218 kb on + strand, within hsdM at 1784.236 kb on - strand, within hsdM at 1784.373 kb on + strand, within hsdM at 1784.400 kb on + strand, within hsdM at 1784.479 kb on + strand, within hsdM at 1784.558 kb on - strand, within hsdM at 1784.692 kb on - strand, within hsdM at 1784.744 kb on + strand, within hsdM at 1784.753 kb on + strand, within hsdM at 1784.921 kb on - strand, within hsdM at 1784.935 kb on + strand, within hsdM at 1785.102 kb on - strand, within hsdM at 1785.160 kb on - strand, within hsdM at 1785.190 kb on + strand, within hsdM at 1785.198 kb on - strand, within hsdM at 1785.200 kb on + strand, within hsdM at 1785.266 kb on - strand, within hsdM at 1785.380 kb on + strand at 1785.456 kb on - strand at 1785.469 kb on - strand at 1785.738 kb on + strand, within DVU1710 at 1785.810 kb on + strand, within DVU1710 at 1785.916 kb on + strand, within DVU1710 at 1785.998 kb on - strand, within DVU1710 at 1786.004 kb on + strand, within DVU1710 at 1786.014 kb on + strand, within DVU1710 at 1786.022 kb on - strand, within DVU1710 at 1786.022 kb on - strand, within DVU1710 at 1786.022 kb on - strand, within DVU1710 at 1786.047 kb on - strand at 1786.064 kb on + strand at 1786.065 kb on + strand at 1786.084 kb on - strand at 1786.222 kb on + strand at 1786.230 kb on - strand at 1786.245 kb on - strand at 1786.257 kb on + strand at 1786.419 kb on + strand at 1786.427 kb on - strand at 1786.467 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Cysteine 1mM as (N) remove 1,783,091 - DVU1708 0.12 -0.4 1,783,170 + DVU1708 0.20 -0.3 1,783,266 - DVU1708 0.29 -0.3 1,783,296 - DVU1708 0.32 -0.4 1,783,555 + DVU1708 0.57 +0.1 1,783,665 + DVU1708 0.68 +0.2 1,784,088 - +1.0 1,784,218 + hsdM DVU1709 0.15 -0.4 1,784,236 - hsdM DVU1709 0.16 -0.6 1,784,373 + hsdM DVU1709 0.25 +0.2 1,784,400 + hsdM DVU1709 0.27 -0.2 1,784,479 + hsdM DVU1709 0.32 -0.2 1,784,558 - hsdM DVU1709 0.37 -1.7 1,784,692 - hsdM DVU1709 0.46 -0.4 1,784,744 + hsdM DVU1709 0.50 -0.1 1,784,753 + hsdM DVU1709 0.50 -0.4 1,784,921 - hsdM DVU1709 0.61 -1.1 1,784,935 + hsdM DVU1709 0.62 -0.3 1,785,102 - hsdM DVU1709 0.73 -0.7 1,785,160 - hsdM DVU1709 0.77 -2.8 1,785,190 + hsdM DVU1709 0.79 -0.5 1,785,198 - hsdM DVU1709 0.80 -0.8 1,785,200 + hsdM DVU1709 0.80 -1.2 1,785,266 - hsdM DVU1709 0.84 -1.8 1,785,380 + -1.9 1,785,456 - -0.6 1,785,469 - -0.4 1,785,738 + DVU1710 0.37 -0.7 1,785,810 + DVU1710 0.50 +0.1 1,785,916 + DVU1710 0.68 +0.1 1,785,998 - DVU1710 0.82 +0.2 1,786,004 + DVU1710 0.83 -1.4 1,786,014 + DVU1710 0.85 +0.2 1,786,022 - DVU1710 0.87 +0.8 1,786,022 - DVU1710 0.87 -0.5 1,786,022 - DVU1710 0.87 -0.3 1,786,047 - +1.2 1,786,064 + -0.4 1,786,065 + -0.4 1,786,084 - -0.5 1,786,222 + +0.7 1,786,230 - -0.6 1,786,245 - -0.5 1,786,257 + +0.7 1,786,419 + +0.2 1,786,427 - -0.3 1,786,467 + -0.1
Or see this region's nucleotide sequence