Experiment: MoLS4 with L-Cysteine 1mM as (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0029 and DORF25031 are separated by 73 nucleotides DORF25031 and DVU0030 are separated by 305 nucleotides
DVU0029: DVU0029 - hydantoinase/oxoprolinase family protein (TIGR), at 33,986 to 35,698
DVU0029
DORF25031: DORF25031 - SEED: FIG00606465: hypothetical protein, at 35,772 to 36,176
DORF25031
DVU0030: DVU0030 - transcriptional regulator, GntR family (TIGR), at 36,482 to 37,984
DVU0030
Position (kb) 35
36
37 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 34.801 kb on - strand, within DVU0029 at 34.900 kb on + strand, within DVU0029 at 34.961 kb on - strand, within DVU0029 at 34.972 kb on - strand, within DVU0029 at 34.974 kb on + strand, within DVU0029 at 35.035 kb on + strand, within DVU0029 at 35.043 kb on - strand, within DVU0029 at 35.077 kb on - strand, within DVU0029 at 35.114 kb on - strand, within DVU0029 at 35.127 kb on + strand, within DVU0029 at 35.143 kb on + strand, within DVU0029 at 35.146 kb on - strand, within DVU0029 at 35.146 kb on - strand, within DVU0029 at 35.146 kb on - strand, within DVU0029 at 35.169 kb on - strand, within DVU0029 at 35.178 kb on + strand, within DVU0029 at 35.206 kb on - strand, within DVU0029 at 35.254 kb on + strand, within DVU0029 at 35.274 kb on - strand, within DVU0029 at 35.274 kb on - strand, within DVU0029 at 35.303 kb on + strand, within DVU0029 at 35.449 kb on + strand, within DVU0029 at 35.466 kb on + strand, within DVU0029 at 35.474 kb on - strand, within DVU0029 at 35.522 kb on + strand, within DVU0029 at 35.550 kb on + strand at 35.599 kb on + strand at 35.607 kb on - strand at 35.642 kb on + strand at 35.665 kb on + strand at 35.670 kb on + strand at 35.762 kb on - strand at 35.764 kb on + strand at 35.864 kb on - strand, within DORF25031 at 35.913 kb on + strand, within DORF25031 at 35.979 kb on + strand, within DORF25031 at 35.979 kb on + strand, within DORF25031 at 36.014 kb on - strand, within DORF25031 at 36.014 kb on - strand, within DORF25031 at 36.048 kb on - strand, within DORF25031 at 36.155 kb on + strand at 36.220 kb on + strand at 36.220 kb on + strand at 36.228 kb on - strand at 36.232 kb on + strand at 36.265 kb on + strand at 36.282 kb on - strand at 36.311 kb on - strand at 36.323 kb on + strand at 36.331 kb on - strand at 36.333 kb on - strand at 36.358 kb on - strand at 36.371 kb on + strand at 36.379 kb on - strand at 36.529 kb on - strand at 36.551 kb on - strand at 36.622 kb on - strand at 36.641 kb on + strand, within DVU0030 at 36.649 kb on - strand, within DVU0030 at 36.655 kb on + strand, within DVU0030 at 36.706 kb on + strand, within DVU0030 at 36.714 kb on - strand, within DVU0030 at 36.758 kb on - strand, within DVU0030 at 36.811 kb on - strand, within DVU0030 at 36.824 kb on - strand, within DVU0030 at 36.871 kb on + strand, within DVU0030 at 36.910 kb on + strand, within DVU0030 at 36.937 kb on - strand, within DVU0030 at 36.953 kb on - strand, within DVU0030 at 37.016 kb on - strand, within DVU0030 at 37.016 kb on - strand, within DVU0030 at 37.020 kb on + strand, within DVU0030 at 37.041 kb on - strand, within DVU0030 at 37.057 kb on - strand, within DVU0030 at 37.063 kb on + strand, within DVU0030 at 37.065 kb on - strand, within DVU0030 at 37.072 kb on - strand, within DVU0030 at 37.080 kb on + strand, within DVU0030 at 37.120 kb on + strand, within DVU0030 at 37.128 kb on - strand, within DVU0030
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Cysteine 1mM as (N) remove 34,801 - DVU0029 0.48 +1.1 34,900 + DVU0029 0.53 +0.1 34,961 - DVU0029 0.57 -0.0 34,972 - DVU0029 0.58 +0.7 34,974 + DVU0029 0.58 +0.6 35,035 + DVU0029 0.61 +0.8 35,043 - DVU0029 0.62 +0.2 35,077 - DVU0029 0.64 -0.5 35,114 - DVU0029 0.66 +1.1 35,127 + DVU0029 0.67 +0.7 35,143 + DVU0029 0.68 +0.2 35,146 - DVU0029 0.68 +0.1 35,146 - DVU0029 0.68 +0.3 35,146 - DVU0029 0.68 -2.3 35,169 - DVU0029 0.69 +1.0 35,178 + DVU0029 0.70 -0.1 35,206 - DVU0029 0.71 +0.0 35,254 + DVU0029 0.74 +1.4 35,274 - DVU0029 0.75 +0.3 35,274 - DVU0029 0.75 +0.1 35,303 + DVU0029 0.77 +0.4 35,449 + DVU0029 0.85 +0.1 35,466 + DVU0029 0.86 +2.1 35,474 - DVU0029 0.87 -0.2 35,522 + DVU0029 0.90 -0.3 35,550 + -0.2 35,599 + +0.3 35,607 - +0.1 35,642 + +0.5 35,665 + -0.4 35,670 + -1.9 35,762 - -0.2 35,764 + -0.3 35,864 - DORF25031 0.23 +2.1 35,913 + DORF25031 0.35 -0.5 35,979 + DORF25031 0.51 +0.0 35,979 + DORF25031 0.51 -0.2 36,014 - DORF25031 0.60 -0.1 36,014 - DORF25031 0.60 +2.0 36,048 - DORF25031 0.68 +0.6 36,155 + -1.3 36,220 + -0.1 36,220 + -0.5 36,228 - -0.5 36,232 + +1.5 36,265 + -0.3 36,282 - -0.6 36,311 - +1.1 36,323 + -1.1 36,331 - +0.0 36,333 - -0.3 36,358 - +0.8 36,371 + -0.1 36,379 - +0.3 36,529 - +1.1 36,551 - +1.1 36,622 - -2.4 36,641 + DVU0030 0.11 -2.2 36,649 - DVU0030 0.11 -4.0 36,655 + DVU0030 0.12 -1.8 36,706 + DVU0030 0.15 -1.9 36,714 - DVU0030 0.15 -3.5 36,758 - DVU0030 0.18 -2.8 36,811 - DVU0030 0.22 -1.5 36,824 - DVU0030 0.23 -2.3 36,871 + DVU0030 0.26 -2.4 36,910 + DVU0030 0.28 -1.4 36,937 - DVU0030 0.30 -3.3 36,953 - DVU0030 0.31 -1.7 37,016 - DVU0030 0.36 -0.5 37,016 - DVU0030 0.36 -1.2 37,020 + DVU0030 0.36 +1.1 37,041 - DVU0030 0.37 -2.6 37,057 - DVU0030 0.38 -2.0 37,063 + DVU0030 0.39 -2.3 37,065 - DVU0030 0.39 -0.9 37,072 - DVU0030 0.39 -2.6 37,080 + DVU0030 0.40 +0.1 37,120 + DVU0030 0.42 +0.7 37,128 - DVU0030 0.43 -1.7
Or see this region's nucleotide sequence