Experiment: Lactate-Sulfate (60-50mM) with 0.1% Yeast Extract
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0446 and DVU0447 overlap by 8 nucleotides DVU0447 and gmd are separated by 393 nucleotides
DVU0446: DVU0446 - sodium/solute symporter family protein (TIGR), at 506,042 to 507,589
DVU0446
DVU0447: DVU0447 - membrane protein, putative (TIGR), at 507,582 to 507,899
DVU0447
DVU0448: gmd - GDP-mannose 4,6-dehydratase (TIGR), at 508,293 to 509,438
gmd
Position (kb) 507
508 Strain fitness (log2 ratio) -2
-1
0
1 at 506.693 kb on + strand, within DVU0446 at 506.736 kb on - strand, within DVU0446 at 506.796 kb on + strand, within DVU0446 at 506.804 kb on - strand, within DVU0446 at 506.804 kb on - strand, within DVU0446 at 506.804 kb on - strand, within DVU0446 at 506.848 kb on - strand, within DVU0446 at 506.887 kb on - strand, within DVU0446 at 507.205 kb on - strand, within DVU0446 at 507.209 kb on + strand, within DVU0446 at 507.237 kb on - strand, within DVU0446 at 507.330 kb on + strand, within DVU0446 at 507.415 kb on + strand, within DVU0446 at 507.446 kb on + strand at 507.451 kb on - strand at 507.477 kb on + strand at 507.535 kb on - strand at 507.560 kb on - strand at 507.560 kb on - strand at 507.562 kb on + strand at 507.562 kb on + strand at 507.570 kb on - strand at 507.570 kb on - strand at 507.570 kb on - strand at 507.607 kb on - strand at 507.685 kb on + strand, within DVU0447 at 507.719 kb on + strand, within DVU0447 at 507.782 kb on + strand, within DVU0447 at 507.800 kb on + strand, within DVU0447 at 507.811 kb on + strand, within DVU0447 at 507.819 kb on - strand, within DVU0447 at 507.863 kb on - strand, within DVU0447 at 507.898 kb on - strand at 507.907 kb on + strand at 507.915 kb on - strand at 507.917 kb on - strand at 507.998 kb on - strand at 507.998 kb on - strand at 508.016 kb on + strand at 508.024 kb on - strand at 508.024 kb on - strand at 508.048 kb on - strand at 508.053 kb on - strand at 508.080 kb on + strand at 508.088 kb on - strand at 508.374 kb on - strand at 508.536 kb on + strand, within gmd at 508.544 kb on - strand, within gmd at 508.651 kb on + strand, within gmd at 508.826 kb on - strand, within gmd at 508.866 kb on + strand, within gmd
Per-strain Table
Position Strand Gene LocusTag Fraction Lactate-Sulfate (60-50mM) with 0.1% Yeast Extract remove 506,693 + DVU0446 0.42 -0.5 506,736 - DVU0446 0.45 -0.9 506,796 + DVU0446 0.49 -0.0 506,804 - DVU0446 0.49 -0.2 506,804 - DVU0446 0.49 -1.1 506,804 - DVU0446 0.49 +0.9 506,848 - DVU0446 0.52 -0.3 506,887 - DVU0446 0.55 -1.6 507,205 - DVU0446 0.75 -0.1 507,209 + DVU0446 0.75 -1.5 507,237 - DVU0446 0.77 +0.7 507,330 + DVU0446 0.83 -1.5 507,415 + DVU0446 0.89 -2.0 507,446 + +0.0 507,451 - +0.3 507,477 + -0.7 507,535 - -0.5 507,560 - -0.1 507,560 - +0.1 507,562 + -2.0 507,562 + -0.2 507,570 - -0.0 507,570 - -0.5 507,570 - -0.3 507,607 - -0.2 507,685 + DVU0447 0.32 -0.5 507,719 + DVU0447 0.43 +0.7 507,782 + DVU0447 0.63 -1.8 507,800 + DVU0447 0.69 -0.4 507,811 + DVU0447 0.72 -0.1 507,819 - DVU0447 0.75 -1.1 507,863 - DVU0447 0.88 -0.7 507,898 - +0.1 507,907 + -0.4 507,915 - -1.1 507,917 - -0.5 507,998 - +0.2 507,998 - -0.4 508,016 + +0.1 508,024 - +0.3 508,024 - -0.5 508,048 - +0.1 508,053 - +0.5 508,080 + -0.1 508,088 - +0.6 508,374 - +0.9 508,536 + gmd DVU0448 0.21 -0.5 508,544 - gmd DVU0448 0.22 -0.9 508,651 + gmd DVU0448 0.31 +0.5 508,826 - gmd DVU0448 0.47 +0.5 508,866 + gmd DVU0448 0.50 +0.5
Or see this region's nucleotide sequence