Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_0935

Experiment: Lactate; aerobic; with copper, sample3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Lactate; aerobic; with copper, sample3
1,011,491	+				-0.4
1,011,492	-				-0.4
1,011,528	+				-1.1
1,011,584	+				-0.9
1,011,584	+				+0.9
1,011,584	+				-0.3
1,011,584	+				+0.3
1,011,584	+				-1.5
1,011,584	+				-0.3
1,011,584	+				-0.0
1,011,584	+				+0.7
1,011,584	+				-1.1
1,011,585	-				-0.3
1,011,585	-				-0.3
1,011,585	-				-0.4
1,011,585	-				+0.0
1,011,585	-				+0.5
1,011,585	-				-0.5
1,011,585	-				+0.7
1,011,585	-				-0.7
1,011,585	-				-1.1
1,011,585	-				+0.4
1,011,585	-				+0.7
1,011,585	-				+0.1
1,011,585	-				+0.5
1,011,585	-				+1.0
1,011,596	+				-0.5
1,011,597	-				-1.1
1,011,597	-				-0.2
1,011,597	-				+1.0
1,011,597	-				+1.2
1,011,597	-				+0.7
1,011,597	-				-0.4
1,011,597	-				+0.1
1,011,597	-				-0.1
1,011,597	-				+2.0
1,011,597	-				+0.8
1,011,597	-				-0.0
1,011,611	+				-1.5
1,011,611	+				-0.5
1,011,611	+				-1.9
1,011,951	-				+1.2
1,012,052	+				-0.1
1,012,052	+				-0.5
1,012,121	+				+0.8
1,012,121	+				+0.5
1,012,121	+				+2.5
1,012,121	+				+0.7
1,012,122	-				+0.3
1,012,131	+				-3.2
1,012,131	+				-0.9
1,012,131	+				-2.8
1,012,131	+				-1.2
1,012,141	+				-0.1
1,012,141	+				+0.5
1,012,141	+				-0.4
1,012,141	+				-1.9
1,012,141	+				-0.1
1,012,142	-				-0.2
1,012,142	-				-2.0
1,012,142	-				-0.3
1,012,142	-				-1.2
1,012,142	-				-2.9
1,012,142	-				-1.8
1,012,253	+				-1.1
1,012,295	+				-0.6
1,012,375	-				-0.4
1,012,410	+				-0.5
1,012,410	+				-1.1
1,012,410	+				-0.2
1,012,410	+				-0.6
1,012,410	+				+0.2
1,012,410	+				-1.3
1,012,410	+				-0.0
1,012,410	+				-0.5
1,012,410	+				+0.5
1,012,410	+				+0.2
1,012,411	-				-0.1
1,012,411	-				-0.6
1,012,411	-				+0.2
1,012,411	-				+0.5
1,012,411	-				-1.0
1,012,411	-				-1.1
1,012,411	-				+0.2
1,012,411	-				-1.7
1,012,411	-				-0.5
1,012,471	+				+0.5
1,012,471	+				+1.5
1,012,471	+				+1.2
1,012,471	+				-0.0
1,012,471	+				+0.6
1,012,472	-				-0.1
1,012,472	-				-0.4
1,012,493	+				+0.1
1,012,493	+				-1.3
1,012,521	-				+0.5
1,012,529	-				+0.5
1,012,529	-				-0.5
1,012,529	-				-0.2
1,012,529	-				-0.5
1,012,531	+				+0.5
1,012,531	+				-2.5
1,012,531	+				-0.2
1,012,531	+				-0.1
1,012,531	+				-0.4
1,012,531	+				-1.5
1,012,532	-				+0.5
1,012,532	-				+1.8
1,012,532	-				-1.1
1,012,532	-				-1.2
1,012,532	-				-1.1
1,012,546	+				-0.4
1,012,546	+				-0.5
1,012,546	+				-0.0
1,012,547	-				-0.0
1,012,547	-				+0.3
1,012,598	+				+1.0
1,012,598	+				+0.5
1,012,598	+				-1.1
1,012,599	-				+0.7
1,012,631	+				-1.1
1,012,631	+				-1.3
1,012,632	-				-0.3
1,012,632	-				-0.3
1,012,632	-				+0.0
1,012,632	-				-0.1
1,012,632	-				+0.6
1,012,670	+		Psest_0935	0.10	-0.8
1,012,671	-		Psest_0935	0.10	-0.0
1,012,827	-		Psest_0935	0.15	-0.4
1,012,827	-		Psest_0935	0.15	-0.7
1,012,827	-		Psest_0935	0.15	-0.1
1,012,827	-		Psest_0935	0.15	-2.5
1,012,908	+		Psest_0935	0.18	+0.3
1,012,944	+		Psest_0935	0.19	-0.2
1,012,944	+		Psest_0935	0.19	-0.5
1,012,944	+		Psest_0935	0.19	-1.3
1,012,944	+		Psest_0935	0.19	-0.0
1,012,944	+		Psest_0935	0.19	-0.2
1,012,944	+		Psest_0935	0.19	-0.9
1,012,944	+		Psest_0935	0.19	-0.1
1,012,945	-		Psest_0935	0.19	-0.7
1,012,945	-		Psest_0935	0.19	-1.5
1,013,064	+		Psest_0935	0.23	-0.6
1,013,065	-		Psest_0935	0.23	-0.0
1,013,103	+		Psest_0935	0.25	+1.0
1,013,103	+		Psest_0935	0.25	-0.8
1,013,103	+		Psest_0935	0.25	+0.6
1,013,103	+		Psest_0935	0.25	+0.1
1,013,104	-		Psest_0935	0.25	-2.5
1,013,104	-		Psest_0935	0.25	-0.7
1,013,104	-		Psest_0935	0.25	+1.5
1,013,104	-		Psest_0935	0.25	-0.5
1,013,242	+		Psest_0935	0.29	+0.3
1,013,242	+		Psest_0935	0.29	+0.2
1,013,243	-		Psest_0935	0.29	-0.9
1,013,243	-		Psest_0935	0.29	+0.4
1,013,243	-		Psest_0935	0.29	-4.1
1,013,243	-		Psest_0935	0.29	-0.9
1,013,243	-		Psest_0935	0.29	+0.8
1,013,336	+		Psest_0935	0.32	+1.6
1,013,336	+		Psest_0935	0.32	+0.0
1,013,336	+		Psest_0935	0.32	-0.7
1,013,337	-		Psest_0935	0.32	-0.6
1,013,337	-		Psest_0935	0.32	-0.3
1,013,337	-		Psest_0935	0.32	+0.0
1,013,337	-		Psest_0935	0.32	-1.9
1,013,337	-		Psest_0935	0.32	-1.6
1,013,337	-		Psest_0935	0.32	-0.4
1,013,354	+		Psest_0935	0.33	+0.3
1,013,354	+		Psest_0935	0.33	+0.2
1,013,354	+		Psest_0935	0.33	-0.3
1,013,354	+		Psest_0935	0.33	-1.6
1,013,354	+		Psest_0935	0.33	-0.5
1,013,354	+		Psest_0935	0.33	-0.4
1,013,354	+		Psest_0935	0.33	+0.6
1,013,355	-		Psest_0935	0.33	+0.1
1,013,355	-		Psest_0935	0.33	-0.2
1,013,357	+		Psest_0935	0.33	-1.2
1,013,358	-		Psest_0935	0.33	+1.5
1,013,358	-		Psest_0935	0.33	+2.0
1,013,386	-		Psest_0935	0.34	-0.2
1,013,386	-		Psest_0935	0.34	+1.7
1,013,386	-		Psest_0935	0.34	-0.1
1,013,405	+		Psest_0935	0.35	-0.7
1,013,405	+		Psest_0935	0.35	-0.0
1,013,406	-		Psest_0935	0.35	-0.0
1,013,406	-		Psest_0935	0.35	-1.1
1,013,406	-		Psest_0935	0.35	-1.2
1,013,460	+		Psest_0935	0.37	-2.6
1,013,460	+		Psest_0935	0.37	-0.2
1,013,602	+		Psest_0935	0.41	+0.5
1,013,602	+		Psest_0935	0.41	+0.5
1,013,602	-		Psest_0935	0.41	-2.1
1,013,603	-		Psest_0935	0.41	-0.2
1,013,603	-		Psest_0935	0.41	-0.2
1,013,663	+		Psest_0935	0.43	+0.5
1,013,663	+		Psest_0935	0.43	-1.1
1,013,663	+		Psest_0935	0.43	+0.5
1,013,663	+		Psest_0935	0.43	+0.5
1,013,663	+		Psest_0935	0.43	-0.9
1,013,663	+		Psest_0935	0.43	-0.8
1,013,664	-		Psest_0935	0.43	-0.2
1,013,896	+		Psest_0935	0.51	-0.5
1,013,896	+		Psest_0935	0.51	+0.1
1,014,025	+		Psest_0935	0.56	-0.8
1,014,025	+		Psest_0935	0.56	-1.2
1,014,025	+		Psest_0935	0.56	-0.5
1,014,026	-		Psest_0935	0.56	+0.7
1,014,026	-		Psest_0935	0.56	+0.5
1,014,026	-		Psest_0935	0.56	-0.5
1,014,026	-		Psest_0935	0.56	-0.9
1,014,026	-		Psest_0935	0.56	+0.5
1,014,026	-		Psest_0935	0.56	-3.7
1,014,154	+		Psest_0935	0.60	+0.2
1,014,154	+		Psest_0935	0.60	-0.5
1,014,154	+		Psest_0935	0.60	-0.2
1,014,154	+		Psest_0935	0.60	-1.4
1,014,154	+		Psest_0935	0.60	-0.6
1,014,154	+		Psest_0935	0.60	-0.1
1,014,154	+		Psest_0935	0.60	+2.0
1,014,154	+		Psest_0935	0.60	+0.1
1,014,154	+		Psest_0935	0.60	-1.0
1,014,154	+		Psest_0935	0.60	-0.4
1,014,154	+		Psest_0935	0.60	-0.5
1,014,154	+		Psest_0935	0.60	-0.5
1,014,154	+		Psest_0935	0.60	-2.5
1,014,155	-		Psest_0935	0.60	+0.2
1,014,155	-		Psest_0935	0.60	-0.2
1,014,155	-		Psest_0935	0.60	-1.9
1,014,155	-		Psest_0935	0.60	+0.5
1,014,155	-		Psest_0935	0.60	-1.3
1,014,155	-		Psest_0935	0.60	-0.5
1,014,156	+		Psest_0935	0.60	-0.0
1,014,157	-		Psest_0935	0.60	-2.1
1,014,187	+		Psest_0935	0.61	+0.3
1,014,187	+		Psest_0935	0.61	-1.1
1,014,187	+		Psest_0935	0.61	+2.5
1,014,187	+		Psest_0935	0.61	+0.6
1,014,187	+		Psest_0935	0.61	-1.6
1,014,187	+		Psest_0935	0.61	-0.8
1,014,187	+		Psest_0935	0.61	-0.5
1,014,187	+		Psest_0935	0.61	-0.2
1,014,187	+		Psest_0935	0.61	-1.3
1,014,187	+		Psest_0935	0.61	-1.0
1,014,188	-		Psest_0935	0.61	+1.8
1,014,188	-		Psest_0935	0.61	-0.0
1,014,221	+		Psest_0935	0.62	-0.2
1,014,288	+		Psest_0935	0.64	+0.0
1,014,288	+		Psest_0935	0.64	-3.4
1,014,289	-		Psest_0935	0.64	+0.2
1,014,293	+		Psest_0935	0.65	-1.3
1,014,293	+		Psest_0935	0.65	-0.3
1,014,294	-		Psest_0935	0.65	-0.5
1,014,486	+		Psest_0935	0.71	-0.1
1,014,486	+		Psest_0935	0.71	-0.3
1,014,487	-		Psest_0935	0.71	-0.7
1,014,496	+		Psest_0935	0.71	+3.5
1,014,497	-		Psest_0935	0.71	+0.0
1,014,497	-		Psest_0935	0.71	+0.0
1,014,497	-		Psest_0935	0.71	-0.4
1,014,520	-		Psest_0935	0.72	-1.1
1,014,550	+		Psest_0935	0.73	+2.5
1,014,551	-		Psest_0935	0.73	-0.8
1,014,551	-		Psest_0935	0.73	+0.6
1,014,551	-		Psest_0935	0.73	-0.5
1,014,551	-		Psest_0935	0.73	+0.9
1,014,551	-		Psest_0935	0.73	-1.2
1,014,551	-		Psest_0935	0.73	+0.9
1,014,560	+		Psest_0935	0.74	+0.2
1,014,734	+		Psest_0935	0.79	-0.9
1,014,802	+		Psest_0935	0.82	-1.5
1,014,802	+		Psest_0935	0.82	+2.0
1,014,803	-		Psest_0935	0.82	+0.9
1,014,819	-		Psest_0935	0.82	-0.3
1,014,832	+		Psest_0935	0.83	-0.5
1,014,832	+		Psest_0935	0.83	+0.0
1,014,833	-		Psest_0935	0.83	+0.9
1,014,833	-		Psest_0935	0.83	-0.9
1,014,833	-		Psest_0935	0.83	-0.7
1,014,833	-		Psest_0935	0.83	-2.2
1,014,833	-		Psest_0935	0.83	+1.5
1,014,833	-		Psest_0935	0.83	-0.4
1,014,836	+		Psest_0935	0.83	-2.9
1,014,836	+		Psest_0935	0.83	-1.8
1,014,836	+		Psest_0935	0.83	-2.0
1,014,836	+		Psest_0935	0.83	-0.5
1,014,836	+		Psest_0935	0.83	+1.5
1,014,836	+		Psest_0935	0.83	-0.8
1,014,836	+		Psest_0935	0.83	+0.8
1,014,836	+		Psest_0935	0.83	+0.5
1,014,836	+		Psest_0935	0.83	-1.5
1,014,836	+		Psest_0935	0.83	-0.5
1,014,836	+		Psest_0935	0.83	-0.1
1,014,836	+		Psest_0935	0.83	-1.0
1,014,836	+		Psest_0935	0.83	-0.3
1,014,836	+		Psest_0935	0.83	-0.7
1,014,837	-		Psest_0935	0.83	+0.0
1,014,837	-		Psest_0935	0.83	+1.9
1,014,837	-		Psest_0935	0.83	-0.7
1,014,837	-		Psest_0935	0.83	-2.1
1,014,837	-		Psest_0935	0.83	-0.1
1,014,837	-		Psest_0935	0.83	-0.1
1,014,837	-		Psest_0935	0.83	+0.4
1,014,837	-		Psest_0935	0.83	+0.9
1,014,837	-		Psest_0935	0.83	-0.5
1,014,837	-		Psest_0935	0.83	+0.2
1,014,837	-		Psest_0935	0.83	+0.5
1,014,837	-		Psest_0935	0.83	+0.6
1,014,837	-		Psest_0935	0.83	-0.3
1,014,837	-		Psest_0935	0.83	-1.2
1,014,994	+		Psest_0935	0.88	-0.5
1,014,995	-		Psest_0935	0.88	-1.4
1,014,995	-		Psest_0935	0.88	+0.6
1,014,995	-		Psest_0935	0.88	-0.4
1,014,998	+		Psest_0935	0.88	-0.5
1,014,998	+		Psest_0935	0.88	+0.2
1,014,998	+		Psest_0935	0.88	+0.2
1,014,998	+		Psest_0935	0.88	-0.5
1,014,999	-		Psest_0935	0.88	+1.0
1,014,999	-		Psest_0935	0.88	-1.4
1,014,999	-		Psest_0935	0.88	-0.0
1,015,004	+		Psest_0935	0.88	-0.1
1,015,004	+		Psest_0935	0.88	-0.5
1,015,004	+		Psest_0935	0.88	+0.9
1,015,004	+		Psest_0935	0.88	+1.3
1,015,004	+		Psest_0935	0.88	-0.2
1,015,004	+		Psest_0935	0.88	-0.0
1,015,004	+		Psest_0935	0.88	-1.5
1,015,005	-		Psest_0935	0.88	+0.3
1,015,005	-		Psest_0935	0.88	-0.3
1,015,005	-		Psest_0935	0.88	-0.7
1,015,005	-		Psest_0935	0.88	-0.4
1,015,005	-		Psest_0935	0.88	+0.5
1,015,005	-		Psest_0935	0.88	-0.4
1,015,005	-		Psest_0935	0.88	-0.1
1,015,005	-		Psest_0935	0.88	+0.5
1,015,005	-		Psest_0935	0.88	-0.7
1,015,056	-				-1.7
1,015,155	+				-1.8
1,015,158	+				+0.5
1,015,158	+				+0.6
1,015,159	-				-0.2
1,015,202	+				-0.7
1,015,202	+				-0.2
1,015,202	+				+0.1
1,015,202	+				+1.0
1,015,202	+				+1.8
1,015,202	+				-0.5
1,015,202	+				-0.3
1,015,203	-				-1.3
1,015,203	-				-0.8
1,015,203	-				-0.0
1,015,203	-				+0.9
1,015,228	+				-0.5
1,015,228	+				+0.2
1,015,228	+				-1.0
1,015,228	+				+1.0
1,015,228	+				-0.5
1,015,228	+				-0.6
1,015,228	+				+2.8
1,015,229	-				-0.9
1,015,229	-				-0.3
1,015,229	-				-0.5
1,015,229	-				+0.5
1,015,229	-				+0.8
1,015,229	-				+0.5
1,015,229	-				+2.3
1,015,229	-				-0.6
1,015,232	+				+1.5
1,015,232	+				+0.7
1,015,232	+				-0.1
1,015,232	+				+0.5
1,015,233	-				+2.0
1,015,233	-				+0.5
1,015,233	-				+0.0
1,015,233	-				-1.3
1,015,233	-				-1.2
1,015,345	+				-0.5
1,015,345	+				-0.4
1,015,345	+				-0.7
1,015,346	-				-0.4
1,015,346	-				+1.8
1,015,346	-				-0.6
1,015,370	+				-0.6
1,015,370	+				-0.5
1,015,426	+				+0.3
1,015,426	+				-1.0
1,015,427	-				+0.7
1,015,427	-				-2.7
1,015,427	-				-0.1
1,015,427	-				+2.3
1,015,438	+				-1.0
1,015,438	+				-0.4
1,015,438	+				-0.3
1,015,438	+				-0.2
1,015,438	+				-0.6
1,015,438	+				-1.4
1,015,438	+				-2.9
1,015,438	+				+1.7
1,015,438	+				-0.5
1,015,438	+				+0.6
1,015,439	-				-0.9
1,015,439	-				+2.0
1,015,439	-				-0.7
1,015,439	-				-0.1
1,015,439	-				-0.3
1,015,439	-				+1.2
1,015,439	-				+1.0
1,015,439	-				-0.6
1,015,439	-				-1.3
1,015,439	-				+0.6
1,015,439	-				-1.0
1,015,439	-				-0.0
1,015,439	-				-1.0
1,015,475	+				+0.3
1,015,475	+				-0.3
1,015,475	+				-0.2
1,015,482	+				+0.4
1,015,482	+				-0.3
1,015,482	+				+0.1
1,015,501	+				-0.5
1,015,501	+				+3.8
1,015,501	+				+0.5
1,015,501	+				-0.9
1,015,501	+				-0.4
1,015,501	+				+1.0
1,015,501	+				+1.5
1,015,501	+				+3.0
1,015,501	+				-0.7
1,015,502	-				-3.1
1,015,502	-				+0.0
1,015,502	-				-1.0
1,015,502	-				-1.0
1,015,502	-				+1.8
1,015,502	-				-0.5
1,015,502	-				-0.1
1,015,502	-				+0.5
1,015,502	-				-0.9
1,015,502	-				-0.2
1,015,502	-				-0.2
1,015,502	-				-1.5
1,015,502	-				+0.5
1,015,510	+				+0.9
1,015,510	+				-0.3
1,015,511	-				+0.1
1,015,511	-				+0.8
1,015,516	+		Psest_0936	0.10	+0.5
1,015,519	+		Psest_0936	0.11	+0.2
1,015,520	-		Psest_0936	0.11	+0.0
1,015,520	-		Psest_0936	0.11	+0.6
1,015,578	+		Psest_0936	0.15	+0.2
1,015,579	-		Psest_0936	0.15	+1.2
1,015,579	-		Psest_0936	0.15	-1.9
1,015,579	-		Psest_0936	0.15	-1.3
1,015,614	+		Psest_0936	0.18	+1.1
1,015,615	-		Psest_0936	0.18	-0.9
1,015,615	-		Psest_0936	0.18	-0.3
1,015,615	-		Psest_0936	0.18	+0.1
1,015,640	-		Psest_0936	0.20	-0.1
1,015,745	+		Psest_0936	0.28	-0.4
1,015,745	+		Psest_0936	0.28	+3.2
1,015,753	+		Psest_0936	0.29	-0.3
1,015,753	+		Psest_0936	0.29	-2.1
1,015,753	+		Psest_0936	0.29	-0.1
1,015,753	+		Psest_0936	0.29	-2.1
1,015,753	+		Psest_0936	0.29	-0.5
1,015,754	-		Psest_0936	0.29	-1.1
1,015,771	-		Psest_0936	0.30	-0.1
1,015,780	+		Psest_0936	0.31	+1.3
1,015,793	-		Psest_0936	0.32	-1.1
1,016,000	-		Psest_0936	0.47	+0.5
1,016,004	+		Psest_0936	0.48	-0.7
1,016,004	+		Psest_0936	0.48	-3.2
1,016,071	+		Psest_0936	0.53	+2.0
1,016,072	-		Psest_0936	0.53	+0.7
1,016,072	-		Psest_0936	0.53	+0.5
1,016,072	-		Psest_0936	0.53	+0.2
1,016,075	+		Psest_0936	0.53	+0.5
1,016,075	+		Psest_0936	0.53	+0.5
1,016,075	+		Psest_0936	0.53	-0.8
1,016,075	+		Psest_0936	0.53	-0.3
1,016,076	-		Psest_0936	0.53	-0.6
1,016,076	-		Psest_0936	0.53	-0.7
1,016,076	-		Psest_0936	0.53	-0.0
1,016,076	-		Psest_0936	0.53	-0.8
1,016,076	-		Psest_0936	0.53	+2.0
1,016,076	-		Psest_0936	0.53	+0.2
1,016,076	-		Psest_0936	0.53	+0.5