Experiment: MoYLS4 with Molybdate 100uM and Tungstate 0.5mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0540 and DVU0542 are separated by 297 nucleotides DVU0542 and DVU0543 are separated by 21 nucleotides DVU0543 and DVU0544 are separated by 22 nucleotides DVU0544 and DVU0545 overlap by 1 nucleotides
DVU0540: DVU0540 - sensor histidine kinase (TIGR), at 611,436 to 613,847
DVU0540
DVU0542: DVU0542 - universal stress protein family (TIGR), at 614,145 to 614,567
DVU0542
DVU0543: DVU0543 - conserved hypothetical protein (TIGR), at 614,589 to 615,698
DVU0543
DVU0544: DVU0544 - hypothetical protein (TIGR), at 615,721 to 616,122
DVU0544
DVU0545: DVU0545 - conserved hypothetical protein (TIGR), at 616,122 to 616,547
DVU0545
Position (kb) 614
615
616 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4
5
6
7 at 613.636 kb on + strand at 613.641 kb on + strand at 613.649 kb on - strand at 613.686 kb on - strand at 613.689 kb on + strand at 613.689 kb on + strand at 613.743 kb on - strand at 613.868 kb on + strand at 613.886 kb on + strand at 613.886 kb on + strand at 613.896 kb on - strand at 613.911 kb on - strand at 613.969 kb on + strand at 614.191 kb on - strand, within DVU0542 at 614.198 kb on - strand, within DVU0542 at 614.198 kb on - strand, within DVU0542 at 614.376 kb on + strand, within DVU0542 at 614.412 kb on + strand, within DVU0542 at 614.667 kb on - strand at 614.841 kb on - strand, within DVU0543 at 614.855 kb on + strand, within DVU0543 at 614.863 kb on - strand, within DVU0543 at 614.866 kb on + strand, within DVU0543 at 615.029 kb on + strand, within DVU0543 at 615.070 kb on + strand, within DVU0543 at 615.105 kb on - strand, within DVU0543 at 615.115 kb on - strand, within DVU0543 at 615.127 kb on + strand, within DVU0543 at 615.278 kb on + strand, within DVU0543 at 615.362 kb on + strand, within DVU0543 at 615.443 kb on - strand, within DVU0543 at 615.484 kb on + strand, within DVU0543 at 615.484 kb on + strand, within DVU0543 at 615.484 kb on + strand, within DVU0543 at 615.494 kb on + strand, within DVU0543 at 615.517 kb on - strand, within DVU0543 at 615.530 kb on - strand, within DVU0543 at 615.546 kb on + strand, within DVU0543 at 615.576 kb on - strand, within DVU0543 at 615.592 kb on - strand at 615.704 kb on + strand at 615.756 kb on + strand at 615.756 kb on + strand at 615.759 kb on - strand at 615.762 kb on - strand, within DVU0544 at 615.764 kb on - strand, within DVU0544 at 615.764 kb on - strand, within DVU0544 at 615.807 kb on + strand, within DVU0544 at 615.808 kb on + strand, within DVU0544 at 615.808 kb on + strand, within DVU0544 at 615.865 kb on + strand, within DVU0544 at 615.932 kb on - strand, within DVU0544 at 616.017 kb on + strand, within DVU0544 at 616.086 kb on + strand at 616.133 kb on - strand at 616.178 kb on - strand, within DVU0545 at 616.193 kb on - strand, within DVU0545 at 616.258 kb on + strand, within DVU0545 at 616.343 kb on + strand, within DVU0545 at 616.353 kb on - strand, within DVU0545 at 616.374 kb on + strand, within DVU0545 at 616.388 kb on - strand, within DVU0545 at 616.471 kb on + strand, within DVU0545 at 616.471 kb on + strand, within DVU0545 at 616.479 kb on - strand, within DVU0545 at 616.492 kb on - strand, within DVU0545 at 616.515 kb on + strand at 616.548 kb on + strand at 616.554 kb on - strand at 616.652 kb on - strand at 616.696 kb on - strand at 616.698 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Molybdate 100uM and Tungstate 0.5mM remove 613,636 + -0.7 613,641 + -0.6 613,649 - -2.6 613,686 - -1.9 613,689 + -3.1 613,689 + -2.9 613,743 - -3.4 613,868 + -1.9 613,886 + -2.4 613,886 + -2.6 613,896 - -2.1 613,911 - -0.2 613,969 + -1.9 614,191 - DVU0542 0.11 -2.0 614,198 - DVU0542 0.13 -2.3 614,198 - DVU0542 0.13 -3.9 614,376 + DVU0542 0.55 -0.4 614,412 + DVU0542 0.63 -3.0 614,667 - +4.4 614,841 - DVU0543 0.23 +4.4 614,855 + DVU0543 0.24 +4.3 614,863 - DVU0543 0.25 +2.6 614,866 + DVU0543 0.25 +4.7 615,029 + DVU0543 0.40 +3.9 615,070 + DVU0543 0.43 +3.7 615,105 - DVU0543 0.46 +4.3 615,115 - DVU0543 0.47 +2.8 615,127 + DVU0543 0.48 +4.3 615,278 + DVU0543 0.62 +4.6 615,362 + DVU0543 0.70 +2.1 615,443 - DVU0543 0.77 +4.3 615,484 + DVU0543 0.81 +4.2 615,484 + DVU0543 0.81 +4.5 615,484 + DVU0543 0.81 +3.3 615,494 + DVU0543 0.82 +4.3 615,517 - DVU0543 0.84 +3.2 615,530 - DVU0543 0.85 +4.8 615,546 + DVU0543 0.86 +4.3 615,576 - DVU0543 0.89 +3.3 615,592 - +3.9 615,704 + +0.6 615,756 + +2.9 615,756 + +4.1 615,759 - +4.9 615,762 - DVU0544 0.10 +4.7 615,764 - DVU0544 0.11 +4.4 615,764 - DVU0544 0.11 +4.0 615,807 + DVU0544 0.21 +4.4 615,808 + DVU0544 0.22 +7.5 615,808 + DVU0544 0.22 +4.3 615,865 + DVU0544 0.36 +4.1 615,932 - DVU0544 0.52 +4.4 616,017 + DVU0544 0.74 +4.4 616,086 + +2.6 616,133 - +3.6 616,178 - DVU0545 0.13 +3.1 616,193 - DVU0545 0.17 +4.6 616,258 + DVU0545 0.32 +4.0 616,343 + DVU0545 0.52 -1.9 616,353 - DVU0545 0.54 +4.6 616,374 + DVU0545 0.59 +3.8 616,388 - DVU0545 0.62 +4.3 616,471 + DVU0545 0.82 +2.8 616,471 + DVU0545 0.82 +2.6 616,479 - DVU0545 0.84 +3.6 616,492 - DVU0545 0.87 +4.5 616,515 + +4.1 616,548 + +2.4 616,554 - +0.9 616,652 - +0.6 616,696 - +1.0 616,698 + +0.8
Or see this region's nucleotide sequence