Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2497

Experiment: MoYLS4 with Molybdate 100uM and Tungstate 0.5mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDVU2495 and DVU2496 are separated by 29 nucleotidesDVU2496 and DVU2497 are separated by 235 nucleotidesDVU2497 and DVU2498 are separated by 24 nucleotidesDVU2498 and ftsZ are separated by 228 nucleotides DVU2495: DVU2495 - thioesterase family protein (TIGR), at 2,607,365 to 2,607,898 DVU2495 DVU2496: DVU2496 - lipoprotein, putative (TIGR), at 2,607,928 to 2,608,380 DVU2496 DVU2497: DVU2497 - lipoprotein, putative (TIGR), at 2,608,616 to 2,609,350 DVU2497 DVU2498: DVU2498 - hypothetical protein (TIGR), at 2,609,375 to 2,609,668 DVU2498 DVU2499: ftsZ - cell division protein FtsZ (TIGR), at 2,609,897 to 2,611,246 ftsZ Position (kb) 2608 2609 2610Strain fitness (log2 ratio) -1 0 1 2at 2607.771 kb on - strand, within DVU2495at 2607.886 kb on + strandat 2607.906 kb on - strandat 2607.919 kb on - strandat 2608.034 kb on + strand, within DVU2496at 2608.070 kb on + strand, within DVU2496at 2608.281 kb on + strand, within DVU2496at 2608.281 kb on + strand, within DVU2496at 2608.281 kb on + strand, within DVU2496at 2608.281 kb on + strand, within DVU2496at 2608.289 kb on - strand, within DVU2496at 2608.324 kb on + strand, within DVU2496at 2608.336 kb on + strandat 2608.338 kb on + strandat 2608.403 kb on - strandat 2608.503 kb on + strandat 2608.566 kb on + strandat 2608.714 kb on - strand, within DVU2497at 2608.806 kb on - strand, within DVU2497at 2608.839 kb on + strand, within DVU2497at 2608.860 kb on + strand, within DVU2497at 2609.010 kb on - strand, within DVU2497at 2609.050 kb on + strand, within DVU2497at 2609.050 kb on + strand, within DVU2497at 2609.050 kb on + strand, within DVU2497at 2609.058 kb on - strand, within DVU2497at 2609.058 kb on - strand, within DVU2497at 2609.109 kb on + strand, within DVU2497at 2609.145 kb on - strand, within DVU2497at 2609.244 kb on + strand, within DVU2497at 2609.353 kb on - strandat 2609.480 kb on + strand, within DVU2498at 2609.777 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction MoYLS4 with Molybdate 100uM and Tungstate 0.5mM
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2,607,771 - DVU2495 0.76 -1.3
2,607,886 + +1.6
2,607,906 - -0.5
2,607,919 - -0.6
2,608,034 + DVU2496 0.23 +0.1
2,608,070 + DVU2496 0.31 -0.9
2,608,281 + DVU2496 0.78 -0.3
2,608,281 + DVU2496 0.78 -0.5
2,608,281 + DVU2496 0.78 -1.4
2,608,281 + DVU2496 0.78 -1.4
2,608,289 - DVU2496 0.80 +0.3
2,608,324 + DVU2496 0.87 -0.3
2,608,336 + -0.4
2,608,338 + -0.3
2,608,403 - -0.4
2,608,503 + +0.7
2,608,566 + -1.3
2,608,714 - DVU2497 0.13 +0.2
2,608,806 - DVU2497 0.26 -1.6
2,608,839 + DVU2497 0.30 -1.6
2,608,860 + DVU2497 0.33 -1.3
2,609,010 - DVU2497 0.54 -1.0
2,609,050 + DVU2497 0.59 -0.9
2,609,050 + DVU2497 0.59 -0.6
2,609,050 + DVU2497 0.59 -0.8
2,609,058 - DVU2497 0.60 -1.1
2,609,058 - DVU2497 0.60 +0.1
2,609,109 + DVU2497 0.67 +2.2
2,609,145 - DVU2497 0.72 +0.8
2,609,244 + DVU2497 0.85 -0.9
2,609,353 - +0.8
2,609,480 + DVU2498 0.36 -1.1
2,609,777 + +0.6

Or see this region's nucleotide sequence