Experiment: MoYLS4 with Molybdate 100uM and Tungstate 0.5mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt phoH and DVU1882 are separated by 94 nucleotides DVU1882 and DVU1883 overlap by 4 nucleotides DVU1883 and DVU1884 are separated by 226 nucleotides
DVU1881: phoH - phoH family protein (TIGR), at 1,949,567 to 1,950,583
phoH
DVU1882: DVU1882 - HDIG domain protein (TIGR), at 1,950,678 to 1,953,038
DVU1882
DVU1883: DVU1883 - conserved hypothetical protein (TIGR), at 1,953,035 to 1,953,523
DVU1883
DVU1884: DVU1884 - methyl-accepting chemotaxis protein (TIGR), at 1,953,750 to 1,956,152
DVU1884
Position (kb)
1950
1951
1952
1953
1954 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1949.791 kb on + strand, within phoH at 1949.791 kb on + strand, within phoH at 1949.791 kb on + strand, within phoH at 1949.791 kb on + strand, within phoH at 1949.799 kb on - strand, within phoH at 1949.799 kb on - strand, within phoH at 1949.822 kb on + strand, within phoH at 1949.825 kb on - strand, within phoH at 1949.833 kb on + strand, within phoH at 1950.036 kb on + strand, within phoH at 1950.054 kb on - strand, within phoH at 1950.074 kb on + strand, within phoH at 1950.150 kb on - strand, within phoH at 1950.176 kb on - strand, within phoH at 1950.227 kb on - strand, within phoH at 1950.271 kb on + strand, within phoH at 1950.299 kb on + strand, within phoH at 1950.322 kb on + strand, within phoH at 1950.410 kb on - strand, within phoH at 1950.523 kb on + strand at 1950.635 kb on + strand at 1950.730 kb on - strand at 1950.916 kb on + strand, within DVU1882 at 1950.916 kb on + strand, within DVU1882 at 1951.051 kb on + strand, within DVU1882 at 1951.076 kb on + strand, within DVU1882 at 1951.076 kb on + strand, within DVU1882 at 1951.084 kb on - strand, within DVU1882 at 1951.114 kb on + strand, within DVU1882 at 1951.147 kb on + strand, within DVU1882 at 1951.168 kb on + strand, within DVU1882 at 1951.334 kb on + strand, within DVU1882 at 1951.342 kb on - strand, within DVU1882 at 1951.377 kb on + strand, within DVU1882 at 1951.654 kb on + strand, within DVU1882 at 1951.714 kb on - strand, within DVU1882 at 1951.739 kb on + strand, within DVU1882 at 1951.807 kb on + strand, within DVU1882 at 1951.907 kb on + strand, within DVU1882 at 1951.942 kb on + strand, within DVU1882 at 1951.952 kb on + strand, within DVU1882 at 1951.992 kb on + strand, within DVU1882 at 1952.067 kb on - strand, within DVU1882 at 1952.091 kb on - strand, within DVU1882 at 1952.185 kb on + strand, within DVU1882 at 1952.219 kb on + strand, within DVU1882 at 1952.291 kb on - strand, within DVU1882 at 1952.464 kb on - strand, within DVU1882 at 1952.552 kb on + strand, within DVU1882 at 1952.579 kb on + strand, within DVU1882 at 1952.579 kb on + strand, within DVU1882 at 1952.597 kb on - strand, within DVU1882 at 1952.832 kb on - strand at 1952.832 kb on - strand at 1952.838 kb on + strand at 1952.914 kb on - strand at 1952.914 kb on - strand at 1953.633 kb on + strand at 1953.638 kb on + strand at 1953.653 kb on + strand at 1953.653 kb on + strand at 1953.738 kb on + strand at 1953.970 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Molybdate 100uM and Tungstate 0.5mM remove 1,949,791 + phoH DVU1881 0.22 -0.6 1,949,791 + phoH DVU1881 0.22 -0.2 1,949,791 + phoH DVU1881 0.22 -1.3 1,949,791 + phoH DVU1881 0.22 +0.6 1,949,799 - phoH DVU1881 0.23 -0.7 1,949,799 - phoH DVU1881 0.23 -0.2 1,949,822 + phoH DVU1881 0.25 +0.1 1,949,825 - phoH DVU1881 0.25 -0.1 1,949,833 + phoH DVU1881 0.26 -0.4 1,950,036 + phoH DVU1881 0.46 +0.7 1,950,054 - phoH DVU1881 0.48 -0.7 1,950,074 + phoH DVU1881 0.50 -0.1 1,950,150 - phoH DVU1881 0.57 -0.8 1,950,176 - phoH DVU1881 0.60 -0.4 1,950,227 - phoH DVU1881 0.65 +0.5 1,950,271 + phoH DVU1881 0.69 +0.1 1,950,299 + phoH DVU1881 0.72 -0.5 1,950,322 + phoH DVU1881 0.74 -0.8 1,950,410 - phoH DVU1881 0.83 +1.5 1,950,523 + +0.6 1,950,635 + -1.5 1,950,730 - -0.5 1,950,916 + DVU1882 0.10 -0.7 1,950,916 + DVU1882 0.10 +0.0 1,951,051 + DVU1882 0.16 -1.1 1,951,076 + DVU1882 0.17 -2.3 1,951,076 + DVU1882 0.17 -1.0 1,951,084 - DVU1882 0.17 -0.2 1,951,114 + DVU1882 0.18 -1.2 1,951,147 + DVU1882 0.20 -0.7 1,951,168 + DVU1882 0.21 -1.1 1,951,334 + DVU1882 0.28 +1.2 1,951,342 - DVU1882 0.28 -0.6 1,951,377 + DVU1882 0.30 -1.1 1,951,654 + DVU1882 0.41 -0.4 1,951,714 - DVU1882 0.44 -0.5 1,951,739 + DVU1882 0.45 -0.8 1,951,807 + DVU1882 0.48 -1.9 1,951,907 + DVU1882 0.52 -0.8 1,951,942 + DVU1882 0.54 -1.2 1,951,952 + DVU1882 0.54 +0.1 1,951,992 + DVU1882 0.56 +2.6 1,952,067 - DVU1882 0.59 -0.7 1,952,091 - DVU1882 0.60 -0.4 1,952,185 + DVU1882 0.64 +0.3 1,952,219 + DVU1882 0.65 -1.0 1,952,291 - DVU1882 0.68 -2.5 1,952,464 - DVU1882 0.76 -0.6 1,952,552 + DVU1882 0.79 -0.8 1,952,579 + DVU1882 0.81 -1.4 1,952,579 + DVU1882 0.81 +1.6 1,952,597 - DVU1882 0.81 -1.4 1,952,832 - +1.1 1,952,832 - -1.0 1,952,838 + -3.3 1,952,914 - -0.1 1,952,914 - +0.7 1,953,633 + +0.3 1,953,638 + +1.8 1,953,653 + +1.1 1,953,653 + +0.0 1,953,738 + +1.3 1,953,970 + -1.8
Or see this region's nucleotide sequence