Experiment: MoYLS4 with Molybdate 100uM and Tungstate 0.5mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt fliM and truA are separated by 599 nucleotides truA and DVU0912 are separated by 1 nucleotides DVU0912 and DVU0913 are separated by 76 nucleotides
DVU0910: fliM - flagellar motor switch protein FliM (TIGR), at 1,004,227 to 1,005,207
fliM
DVU0911: truA - tRNA pseudouridine synthase A (TIGR), at 1,005,807 to 1,006,700
truA
DVU0912: DVU0912 - conserved domain protein (TIGR), at 1,006,702 to 1,007,286
DVU0912
DVU0913: DVU0913 - conserved hypothetical protein (TIGR), at 1,007,363 to 1,007,800
DVU0913
Position (kb)
1005
1006
1007 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1004.903 kb on + strand, within fliM at 1004.945 kb on - strand, within fliM at 1004.979 kb on + strand, within fliM at 1005.058 kb on - strand, within fliM at 1005.065 kb on - strand, within fliM at 1005.083 kb on - strand, within fliM at 1005.121 kb on - strand at 1005.229 kb on - strand at 1005.379 kb on + strand at 1005.482 kb on + strand at 1005.533 kb on - strand at 1005.577 kb on - strand at 1005.680 kb on + strand at 1005.723 kb on - strand at 1005.807 kb on - strand at 1005.963 kb on - strand, within truA at 1006.088 kb on - strand, within truA at 1006.112 kb on - strand, within truA at 1006.112 kb on - strand, within truA at 1006.130 kb on - strand, within truA at 1006.263 kb on + strand, within truA at 1006.270 kb on + strand, within truA at 1006.271 kb on - strand, within truA at 1006.294 kb on + strand, within truA at 1006.307 kb on - strand, within truA at 1006.313 kb on + strand, within truA at 1006.346 kb on + strand, within truA at 1006.482 kb on - strand, within truA at 1006.617 kb on - strand at 1006.643 kb on - strand at 1006.651 kb on - strand at 1006.689 kb on + strand at 1006.693 kb on - strand at 1006.841 kb on + strand, within DVU0912 at 1006.841 kb on - strand, within DVU0912 at 1006.921 kb on + strand, within DVU0912 at 1006.931 kb on + strand, within DVU0912 at 1007.188 kb on + strand, within DVU0912 at 1007.222 kb on + strand, within DVU0912 at 1007.222 kb on + strand, within DVU0912 at 1007.285 kb on + strand at 1007.295 kb on + strand at 1007.303 kb on - strand at 1007.547 kb on + strand, within DVU0913 at 1007.555 kb on - strand, within DVU0913 at 1007.576 kb on + strand, within DVU0913 at 1007.584 kb on - strand, within DVU0913 at 1007.584 kb on - strand, within DVU0913 at 1007.690 kb on - strand, within DVU0913
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Molybdate 100uM and Tungstate 0.5mM remove 1,004,903 + fliM DVU0910 0.69 -1.1 1,004,945 - fliM DVU0910 0.73 -1.2 1,004,979 + fliM DVU0910 0.77 -1.7 1,005,058 - fliM DVU0910 0.85 -0.9 1,005,065 - fliM DVU0910 0.85 -1.1 1,005,083 - fliM DVU0910 0.87 +0.6 1,005,121 - +0.6 1,005,229 - +0.2 1,005,379 + -0.6 1,005,482 + -1.4 1,005,533 - -0.7 1,005,577 - -0.6 1,005,680 + -0.1 1,005,723 - -0.7 1,005,807 - -0.6 1,005,963 - truA DVU0911 0.17 +1.6 1,006,088 - truA DVU0911 0.31 -1.3 1,006,112 - truA DVU0911 0.34 -2.3 1,006,112 - truA DVU0911 0.34 -0.6 1,006,130 - truA DVU0911 0.36 -0.7 1,006,263 + truA DVU0911 0.51 +0.6 1,006,270 + truA DVU0911 0.52 +1.0 1,006,271 - truA DVU0911 0.52 +0.3 1,006,294 + truA DVU0911 0.54 -1.0 1,006,307 - truA DVU0911 0.56 -0.0 1,006,313 + truA DVU0911 0.57 -1.9 1,006,346 + truA DVU0911 0.60 +1.0 1,006,482 - truA DVU0911 0.76 -1.5 1,006,617 - -0.7 1,006,643 - -0.6 1,006,651 - -1.0 1,006,689 + -1.0 1,006,693 - -0.9 1,006,841 + DVU0912 0.24 -0.7 1,006,841 - DVU0912 0.24 +1.6 1,006,921 + DVU0912 0.37 +0.7 1,006,931 + DVU0912 0.39 -1.1 1,007,188 + DVU0912 0.83 +3.2 1,007,222 + DVU0912 0.89 -0.5 1,007,222 + DVU0912 0.89 -0.7 1,007,285 + -1.1 1,007,295 + -0.4 1,007,303 - +0.6 1,007,547 + DVU0913 0.42 -0.2 1,007,555 - DVU0913 0.44 -0.7 1,007,576 + DVU0913 0.49 -0.2 1,007,584 - DVU0913 0.50 +0.6 1,007,584 - DVU0913 0.50 -1.0 1,007,690 - DVU0913 0.75 -0.7
Or see this region's nucleotide sequence