Experiment: MoYLS4 with Molybdate 100uM and Tungstate 0.5mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2280 and torS are separated by 155 nucleotides torS and DVU2282 are separated by 269 nucleotides
DVU2280: DVU2280 - amino acid permease family protein (TIGR), at 2,368,269 to 2,369,777
DVU2280
DVU2281: torS - sensor histidine kinase/response regulator (TIGR), at 2,369,933 to 2,372,134
torS
DVU2282: DVU2282 - hypothetical protein (TIGR), at 2,372,404 to 2,373,954
DVU2282
Position (kb)
2369
2370
2371
2372
2373 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2368.935 kb on + strand, within DVU2280 at 2369.031 kb on - strand, within DVU2280 at 2369.071 kb on - strand, within DVU2280 at 2369.101 kb on - strand, within DVU2280 at 2369.124 kb on + strand, within DVU2280 at 2369.124 kb on + strand, within DVU2280 at 2369.132 kb on - strand, within DVU2280 at 2369.132 kb on - strand, within DVU2280 at 2369.183 kb on + strand, within DVU2280 at 2369.183 kb on + strand, within DVU2280 at 2369.260 kb on - strand, within DVU2280 at 2369.262 kb on + strand, within DVU2280 at 2369.317 kb on - strand, within DVU2280 at 2369.317 kb on - strand, within DVU2280 at 2369.321 kb on + strand, within DVU2280 at 2369.329 kb on - strand, within DVU2280 at 2369.387 kb on + strand, within DVU2280 at 2369.441 kb on - strand, within DVU2280 at 2369.441 kb on - strand, within DVU2280 at 2369.443 kb on + strand, within DVU2280 at 2369.515 kb on + strand, within DVU2280 at 2369.530 kb on + strand, within DVU2280 at 2369.713 kb on + strand at 2369.786 kb on - strand at 2369.795 kb on - strand at 2369.869 kb on + strand at 2369.922 kb on - strand at 2369.927 kb on - strand at 2369.971 kb on + strand at 2369.979 kb on - strand at 2369.984 kb on - strand at 2370.106 kb on + strand at 2370.122 kb on + strand at 2370.137 kb on - strand at 2370.194 kb on + strand, within torS at 2370.195 kb on - strand, within torS at 2370.202 kb on - strand, within torS at 2370.296 kb on - strand, within torS at 2370.313 kb on + strand, within torS at 2370.363 kb on - strand, within torS at 2370.426 kb on + strand, within torS at 2370.439 kb on + strand, within torS at 2370.458 kb on - strand, within torS at 2370.472 kb on + strand, within torS at 2370.713 kb on + strand, within torS at 2370.721 kb on - strand, within torS at 2370.810 kb on - strand, within torS at 2370.814 kb on - strand, within torS at 2370.887 kb on - strand, within torS at 2371.004 kb on - strand, within torS at 2371.098 kb on + strand, within torS at 2371.118 kb on - strand, within torS at 2371.227 kb on - strand, within torS at 2371.358 kb on - strand, within torS at 2371.372 kb on - strand, within torS at 2371.427 kb on - strand, within torS at 2371.543 kb on - strand, within torS at 2371.549 kb on - strand, within torS at 2371.554 kb on + strand, within torS at 2371.618 kb on + strand, within torS at 2371.672 kb on + strand, within torS at 2371.677 kb on + strand, within torS at 2371.725 kb on - strand, within torS at 2371.749 kb on - strand, within torS at 2371.833 kb on - strand, within torS at 2371.839 kb on + strand, within torS at 2371.900 kb on + strand, within torS at 2371.900 kb on + strand, within torS at 2371.906 kb on + strand, within torS at 2371.906 kb on + strand, within torS at 2372.071 kb on + strand at 2372.137 kb on - strand at 2372.151 kb on + strand at 2372.173 kb on + strand at 2372.551 kb on + strand at 2372.572 kb on + strand, within DVU2282 at 2372.623 kb on - strand, within DVU2282 at 2372.625 kb on + strand, within DVU2282 at 2372.658 kb on + strand, within DVU2282 at 2372.666 kb on - strand, within DVU2282 at 2372.693 kb on + strand, within DVU2282 at 2372.708 kb on + strand, within DVU2282 at 2372.708 kb on + strand, within DVU2282 at 2372.716 kb on - strand, within DVU2282 at 2372.716 kb on - strand, within DVU2282 at 2372.760 kb on - strand, within DVU2282 at 2372.780 kb on - strand, within DVU2282 at 2372.886 kb on - strand, within DVU2282 at 2372.995 kb on - strand, within DVU2282 at 2373.081 kb on - strand, within DVU2282 at 2373.094 kb on + strand, within DVU2282
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Molybdate 100uM and Tungstate 0.5mM remove 2,368,935 + DVU2280 0.44 -2.0 2,369,031 - DVU2280 0.50 -0.4 2,369,071 - DVU2280 0.53 +1.4 2,369,101 - DVU2280 0.55 -1.1 2,369,124 + DVU2280 0.57 +0.1 2,369,124 + DVU2280 0.57 -0.7 2,369,132 - DVU2280 0.57 -0.4 2,369,132 - DVU2280 0.57 -0.5 2,369,183 + DVU2280 0.61 -0.7 2,369,183 + DVU2280 0.61 -0.7 2,369,260 - DVU2280 0.66 +0.7 2,369,262 + DVU2280 0.66 -0.8 2,369,317 - DVU2280 0.69 -0.1 2,369,317 - DVU2280 0.69 -0.1 2,369,321 + DVU2280 0.70 +2.0 2,369,329 - DVU2280 0.70 +0.3 2,369,387 + DVU2280 0.74 +0.5 2,369,441 - DVU2280 0.78 +0.6 2,369,441 - DVU2280 0.78 -0.0 2,369,443 + DVU2280 0.78 +1.4 2,369,515 + DVU2280 0.83 -0.7 2,369,530 + DVU2280 0.84 +0.1 2,369,713 + -0.0 2,369,786 - +0.6 2,369,795 - +0.1 2,369,869 + -1.0 2,369,922 - +0.4 2,369,927 - -0.6 2,369,971 + -0.5 2,369,979 - -0.4 2,369,984 - +0.5 2,370,106 + +1.6 2,370,122 + -1.2 2,370,137 - +0.1 2,370,194 + torS DVU2281 0.12 +0.6 2,370,195 - torS DVU2281 0.12 +0.8 2,370,202 - torS DVU2281 0.12 +0.1 2,370,296 - torS DVU2281 0.16 +2.0 2,370,313 + torS DVU2281 0.17 -0.8 2,370,363 - torS DVU2281 0.20 +0.3 2,370,426 + torS DVU2281 0.22 +0.1 2,370,439 + torS DVU2281 0.23 +0.0 2,370,458 - torS DVU2281 0.24 -0.3 2,370,472 + torS DVU2281 0.24 +1.0 2,370,713 + torS DVU2281 0.35 -1.3 2,370,721 - torS DVU2281 0.36 -0.4 2,370,810 - torS DVU2281 0.40 +0.2 2,370,814 - torS DVU2281 0.40 -0.1 2,370,887 - torS DVU2281 0.43 +2.2 2,371,004 - torS DVU2281 0.49 -0.3 2,371,098 + torS DVU2281 0.53 +0.6 2,371,118 - torS DVU2281 0.54 +0.0 2,371,227 - torS DVU2281 0.59 -0.2 2,371,358 - torS DVU2281 0.65 +2.6 2,371,372 - torS DVU2281 0.65 +0.4 2,371,427 - torS DVU2281 0.68 -0.5 2,371,543 - torS DVU2281 0.73 -0.3 2,371,549 - torS DVU2281 0.73 +0.2 2,371,554 + torS DVU2281 0.74 -1.7 2,371,618 + torS DVU2281 0.77 +1.7 2,371,672 + torS DVU2281 0.79 +0.6 2,371,677 + torS DVU2281 0.79 -0.9 2,371,725 - torS DVU2281 0.81 -0.2 2,371,749 - torS DVU2281 0.82 -0.8 2,371,833 - torS DVU2281 0.86 -0.1 2,371,839 + torS DVU2281 0.87 -0.3 2,371,900 + torS DVU2281 0.89 +0.1 2,371,900 + torS DVU2281 0.89 +0.8 2,371,906 + torS DVU2281 0.90 +1.6 2,371,906 + torS DVU2281 0.90 +0.6 2,372,071 + +0.1 2,372,137 - -0.6 2,372,151 + -0.7 2,372,173 + +1.6 2,372,551 + +0.6 2,372,572 + DVU2282 0.11 +0.3 2,372,623 - DVU2282 0.14 -0.0 2,372,625 + DVU2282 0.14 -1.5 2,372,658 + DVU2282 0.16 -0.3 2,372,666 - DVU2282 0.17 +0.3 2,372,693 + DVU2282 0.19 -0.2 2,372,708 + DVU2282 0.20 -1.0 2,372,708 + DVU2282 0.20 +1.4 2,372,716 - DVU2282 0.20 -0.6 2,372,716 - DVU2282 0.20 -0.1 2,372,760 - DVU2282 0.23 -0.2 2,372,780 - DVU2282 0.24 +2.6 2,372,886 - DVU2282 0.31 -0.8 2,372,995 - DVU2282 0.38 +1.6 2,373,081 - DVU2282 0.44 +0.3 2,373,094 + DVU2282 0.44 +0.0
Or see this region's nucleotide sequence