Experiment: MoYLS4 with Molybdate 100uM and Tungstate 0.5mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU1879 and DVU1880 are separated by 394 nucleotides DVU1880 and phoH are separated by 161 nucleotides
DVU1879: DVU1879 - glycosyl transferase, group 1 family protein (TIGR), at 1,947,269 to 1,948,369
DVU1879
DVU1880: DVU1880 - hypothetical protein (TIGR), at 1,948,764 to 1,949,405
DVU1880
DVU1881: phoH - phoH family protein (TIGR), at 1,949,567 to 1,950,583
phoH
Position (kb)
1948
1949
1950 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1948.498 kb on + strand at 1948.506 kb on + strand at 1948.529 kb on - strand at 1948.537 kb on + strand at 1948.708 kb on - strand at 1948.743 kb on - strand at 1948.762 kb on + strand at 1948.762 kb on + strand at 1948.769 kb on - strand at 1948.955 kb on - strand, within DVU1880 at 1949.135 kb on + strand, within DVU1880 at 1949.178 kb on - strand, within DVU1880 at 1949.215 kb on + strand, within DVU1880 at 1949.228 kb on - strand, within DVU1880 at 1949.250 kb on - strand, within DVU1880 at 1949.262 kb on - strand, within DVU1880 at 1949.344 kb on - strand at 1949.385 kb on + strand at 1949.441 kb on - strand at 1949.540 kb on + strand at 1949.635 kb on - strand at 1949.662 kb on - strand at 1949.791 kb on + strand, within phoH at 1949.791 kb on + strand, within phoH at 1949.791 kb on + strand, within phoH at 1949.791 kb on + strand, within phoH at 1949.799 kb on - strand, within phoH at 1949.799 kb on - strand, within phoH at 1949.822 kb on + strand, within phoH at 1949.825 kb on - strand, within phoH at 1949.833 kb on + strand, within phoH at 1950.036 kb on + strand, within phoH at 1950.054 kb on - strand, within phoH at 1950.074 kb on + strand, within phoH at 1950.150 kb on - strand, within phoH at 1950.176 kb on - strand, within phoH at 1950.227 kb on - strand, within phoH at 1950.271 kb on + strand, within phoH at 1950.299 kb on + strand, within phoH at 1950.322 kb on + strand, within phoH
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Molybdate 100uM and Tungstate 0.5mM remove 1,948,498 + -1.8 1,948,506 + +0.1 1,948,529 - -0.5 1,948,537 + -0.1 1,948,708 - -1.0 1,948,743 - +0.9 1,948,762 + -0.6 1,948,762 + -0.4 1,948,769 - -0.1 1,948,955 - DVU1880 0.30 -0.3 1,949,135 + DVU1880 0.58 +1.0 1,949,178 - DVU1880 0.64 -0.6 1,949,215 + DVU1880 0.70 -0.2 1,949,228 - DVU1880 0.72 +0.5 1,949,250 - DVU1880 0.76 -0.4 1,949,262 - DVU1880 0.78 -0.6 1,949,344 - +1.8 1,949,385 + -0.1 1,949,441 - +0.2 1,949,540 + -0.6 1,949,635 - -0.6 1,949,662 - -1.9 1,949,791 + phoH DVU1881 0.22 -0.3 1,949,791 + phoH DVU1881 0.22 -2.3 1,949,791 + phoH DVU1881 0.22 -0.5 1,949,791 + phoH DVU1881 0.22 +1.5 1,949,799 - phoH DVU1881 0.23 -0.5 1,949,799 - phoH DVU1881 0.23 -0.1 1,949,822 + phoH DVU1881 0.25 +0.1 1,949,825 - phoH DVU1881 0.25 -0.2 1,949,833 + phoH DVU1881 0.26 -0.8 1,950,036 + phoH DVU1881 0.46 -0.4 1,950,054 - phoH DVU1881 0.48 +0.8 1,950,074 + phoH DVU1881 0.50 -0.6 1,950,150 - phoH DVU1881 0.57 -0.3 1,950,176 - phoH DVU1881 0.60 -0.2 1,950,227 - phoH DVU1881 0.65 -0.6 1,950,271 + phoH DVU1881 0.69 -0.0 1,950,299 + phoH DVU1881 0.72 -0.6 1,950,322 + phoH DVU1881 0.74 +0.1
Or see this region's nucleotide sequence