Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_4251

Experiment: Lactate-nitrite; anaerobic; with copper; sample3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Lactate-nitrite; anaerobic; with copper; sample3
4,435,388	+		Psest_4249	0.79	-0.1
4,435,388	+		Psest_4249	0.79	+0.3
4,435,388	+		Psest_4249	0.79	-2.5
4,435,388	+		Psest_4249	0.79	+0.2
4,435,585	+		Psest_4249	0.89	-0.5
4,435,607	-		Psest_4249	0.90	-1.3
4,435,833	+				-0.1
4,435,834	-				-2.5
4,435,834	-				-0.9
4,435,948	+		Psest_4250	0.25	-0.1
4,435,949	-		Psest_4250	0.25	+0.6
4,435,949	-		Psest_4250	0.25	-1.1
4,435,949	-		Psest_4250	0.25	-1.3
4,435,949	-		Psest_4250	0.25	+1.0
4,435,997	-		Psest_4250	0.35	+2.1
4,436,040	-		Psest_4250	0.44	-0.3
4,436,040	-		Psest_4250	0.44	-0.3
4,436,040	-		Psest_4250	0.44	-1.8
4,436,040	-		Psest_4250	0.44	-0.8
4,436,040	-		Psest_4250	0.44	-0.1
4,436,040	-		Psest_4250	0.44	-1.3
4,436,040	-		Psest_4250	0.44	-0.7
4,436,040	-		Psest_4250	0.44	+0.3
4,436,040	-		Psest_4250	0.44	+0.5
4,436,069	+		Psest_4250	0.51	+0.7
4,436,069	+		Psest_4250	0.51	+1.9
4,436,069	+		Psest_4250	0.51	-0.2
4,436,069	+		Psest_4250	0.51	-0.9
4,436,069	+		Psest_4250	0.51	-0.2
4,436,069	+		Psest_4250	0.51	-0.7
4,436,069	+		Psest_4250	0.51	+0.3
4,436,069	+		Psest_4250	0.51	+2.1
4,436,069	+		Psest_4250	0.51	+0.1
4,436,070	-		Psest_4250	0.51	+0.7
4,436,070	-		Psest_4250	0.51	-0.6
4,436,070	-		Psest_4250	0.51	+0.3
4,436,087	+		Psest_4250	0.54	+0.9
4,436,087	+		Psest_4250	0.54	+1.3
4,436,088	-		Psest_4250	0.55	-0.9
4,436,127	+		Psest_4250	0.63	-0.7
4,436,127	+		Psest_4250	0.63	-1.1
4,436,130	-		Psest_4250	0.63	-0.3
4,436,143	-		Psest_4250	0.66	+0.3
4,436,149	+		Psest_4250	0.67	-1.0
4,436,150	-		Psest_4250	0.68	+0.9
4,436,209	+		Psest_4250	0.80	+1.2
4,436,210	-		Psest_4250	0.80	-0.7
4,436,210	-		Psest_4250	0.80	+0.8
4,436,210	-		Psest_4250	0.80	+0.4
4,436,210	-		Psest_4250	0.80	+0.8
4,436,210	-		Psest_4250	0.80	+0.1
4,436,210	-		Psest_4250	0.80	-0.7
4,436,272	+				+0.6
4,436,272	+				+0.1
4,436,272	+				-0.6
4,436,272	+				+0.7
4,436,272	+				-0.8
4,436,272	+				-2.8
4,436,272	+				-1.7
4,436,272	+				-1.1
4,436,272	+				+0.7
4,436,272	+				+0.5
4,436,272	+				-2.3
4,436,273	-				-1.0
4,436,273	-				-0.0
4,436,273	-				-0.2
4,436,273	-				-1.3
4,436,273	-				-0.3
4,436,273	-				+0.5
4,436,273	-				-0.6
4,436,273	-				-0.6
4,436,273	-				+2.9
4,436,303	-				-2.6
4,436,314	+				-0.9
4,436,314	+				-0.3
4,436,315	-				+0.2
4,436,315	-				-0.3
4,436,315	-				-0.5
4,436,347	+				+0.3
4,436,395	+				-0.1
4,436,449	+				-0.4
4,436,579	-				-1.5
4,436,600	-				+0.9
4,436,618	-		Psest_4251	0.10	+0.8
4,436,704	+		Psest_4251	0.13	-2.9
4,436,704	+		Psest_4251	0.13	-0.6
4,436,704	+		Psest_4251	0.13	-2.2
4,436,704	+		Psest_4251	0.13	-0.5
4,436,704	+		Psest_4251	0.13	-0.8
4,436,704	+		Psest_4251	0.13	-0.3
4,436,704	+		Psest_4251	0.13	-0.1
4,436,704	+		Psest_4251	0.13	+0.3
4,436,704	+		Psest_4251	0.13	+0.3
4,436,704	+		Psest_4251	0.13	-0.7
4,436,705	-		Psest_4251	0.13	-2.0
4,436,705	-		Psest_4251	0.13	-0.7
4,436,705	-		Psest_4251	0.13	+0.1
4,436,705	-		Psest_4251	0.13	-1.0
4,436,715	+		Psest_4251	0.13	-1.8
4,436,715	+		Psest_4251	0.13	-0.2
4,436,715	+		Psest_4251	0.13	-1.2
4,436,715	+		Psest_4251	0.13	+0.1
4,436,716	-		Psest_4251	0.14	+1.5
4,436,716	-		Psest_4251	0.14	+0.1
4,436,758	+		Psest_4251	0.15	-1.4
4,436,759	-		Psest_4251	0.15	+0.1
4,436,806	+		Psest_4251	0.17	+0.2
4,436,806	+		Psest_4251	0.17	-0.1
4,436,806	+		Psest_4251	0.17	-2.4
4,436,806	+		Psest_4251	0.17	+0.4
4,436,806	+		Psest_4251	0.17	+0.3
4,436,806	+		Psest_4251	0.17	-0.1
4,436,806	+		Psest_4251	0.17	+0.8
4,436,807	-		Psest_4251	0.17	-1.1
4,436,807	-		Psest_4251	0.17	+1.4
4,436,807	-		Psest_4251	0.17	+1.2
4,436,807	-		Psest_4251	0.17	+0.3
4,436,808	+		Psest_4251	0.17	-0.8
4,436,809	-		Psest_4251	0.17	-0.3
4,436,819	+		Psest_4251	0.17	+0.3
4,436,820	-		Psest_4251	0.17	+1.3
4,436,820	-		Psest_4251	0.17	+0.3
4,436,820	-		Psest_4251	0.17	-0.3
4,436,820	-		Psest_4251	0.17	+1.8
4,436,820	-		Psest_4251	0.17	-0.1
4,436,820	-		Psest_4251	0.17	+2.6
4,436,820	-		Psest_4251	0.17	-0.6
4,436,905	+		Psest_4251	0.20	+0.6
4,436,921	+		Psest_4251	0.21	-0.3
4,436,954	+		Psest_4251	0.22	-0.9
4,436,954	+		Psest_4251	0.22	+0.1
4,436,955	-		Psest_4251	0.22	-1.3
4,437,124	+		Psest_4251	0.28	-0.1
4,437,124	+		Psest_4251	0.28	-1.9
4,437,124	+		Psest_4251	0.28	-0.1
4,437,124	+		Psest_4251	0.28	-0.1
4,437,124	+		Psest_4251	0.28	-0.2
4,437,125	-		Psest_4251	0.28	+1.9
4,437,125	-		Psest_4251	0.28	+0.3
4,437,125	-		Psest_4251	0.28	-0.8
4,437,125	-		Psest_4251	0.28	-1.8
4,437,149	+		Psest_4251	0.29	-1.0
4,437,150	-		Psest_4251	0.29	-2.2
4,437,150	-		Psest_4251	0.29	+0.2
4,437,189	+		Psest_4251	0.30	+0.1
4,437,189	+		Psest_4251	0.30	-1.0
4,437,189	+		Psest_4251	0.30	+0.4
4,437,189	+		Psest_4251	0.30	+0.2
4,437,189	+		Psest_4251	0.30	+0.1
4,437,189	+		Psest_4251	0.30	-0.7
4,437,189	+		Psest_4251	0.30	+1.3
4,437,190	-		Psest_4251	0.30	-0.3
4,437,190	-		Psest_4251	0.30	-1.9
4,437,190	-		Psest_4251	0.30	-1.7
4,437,190	-		Psest_4251	0.30	-1.0
4,437,190	-		Psest_4251	0.30	+2.3
4,437,190	-		Psest_4251	0.30	-1.2
4,437,190	-		Psest_4251	0.30	+0.8
4,437,190	-		Psest_4251	0.30	-0.6
4,437,190	-		Psest_4251	0.30	-0.6
4,437,190	-		Psest_4251	0.30	-0.6
4,437,213	+		Psest_4251	0.31	-1.5
4,437,265	+		Psest_4251	0.33	-1.7
4,437,265	+		Psest_4251	0.33	+1.1
4,437,265	+		Psest_4251	0.33	-2.3
4,437,265	+		Psest_4251	0.33	+0.3
4,437,265	+		Psest_4251	0.33	-0.3
4,437,266	-		Psest_4251	0.33	-0.1
4,437,266	-		Psest_4251	0.33	+0.8
4,437,266	-		Psest_4251	0.33	+0.7
4,437,266	-		Psest_4251	0.33	+0.8
4,437,266	-		Psest_4251	0.33	+0.8
4,437,266	-		Psest_4251	0.33	-1.9
4,437,343	+		Psest_4251	0.36	-0.1
4,437,343	+		Psest_4251	0.36	+0.1
4,437,343	+		Psest_4251	0.36	-1.1
4,437,343	+		Psest_4251	0.36	-0.5
4,437,343	+		Psest_4251	0.36	-0.9
4,437,343	+		Psest_4251	0.36	-1.1
4,437,343	+		Psest_4251	0.36	+1.0
4,437,343	+		Psest_4251	0.36	-1.2
4,437,343	+		Psest_4251	0.36	-0.2
4,437,343	+		Psest_4251	0.36	-0.1
4,437,343	+		Psest_4251	0.36	-1.0
4,437,344	-		Psest_4251	0.36	-0.5
4,437,344	-		Psest_4251	0.36	-0.1
4,437,344	-		Psest_4251	0.36	+0.3
4,437,344	-		Psest_4251	0.36	+0.3
4,437,344	-		Psest_4251	0.36	-0.3
4,437,344	-		Psest_4251	0.36	-1.5
4,437,344	-		Psest_4251	0.36	-0.1
4,437,344	-		Psest_4251	0.36	-0.9
4,437,344	-		Psest_4251	0.36	-2.1
4,437,344	-		Psest_4251	0.36	-0.1
4,437,344	-		Psest_4251	0.36	+0.6
4,437,344	-		Psest_4251	0.36	-0.3
4,437,344	-		Psest_4251	0.36	-1.3
4,437,346	-		Psest_4251	0.36	-0.9
4,437,346	-		Psest_4251	0.36	-0.1
4,437,424	-		Psest_4251	0.38	+0.1
4,437,424	-		Psest_4251	0.38	+0.5
4,437,518	+		Psest_4251	0.42	-1.1
4,437,518	+		Psest_4251	0.42	-0.1
4,437,518	+		Psest_4251	0.42	-0.5
4,437,518	+		Psest_4251	0.42	-0.5
4,437,518	+		Psest_4251	0.42	-2.2
4,437,518	+		Psest_4251	0.42	-0.4
4,437,519	-		Psest_4251	0.42	-0.4
4,437,519	-		Psest_4251	0.42	-1.0
4,437,519	-		Psest_4251	0.42	+0.8
4,437,519	-		Psest_4251	0.42	-0.1
4,437,519	-		Psest_4251	0.42	-0.1
4,437,528	+		Psest_4251	0.42	+1.2
4,437,529	-				+0.3
4,437,529	-		Psest_4251	0.42	-0.4
4,437,538	+		Psest_4251	0.42	+0.3
4,437,538	+		Psest_4251	0.42	-0.4
4,437,538	+		Psest_4251	0.42	+0.0
4,437,538	+		Psest_4251	0.42	-0.8
4,437,538	+		Psest_4251	0.42	-1.0
4,437,539	-		Psest_4251	0.42	+0.5
4,437,539	-		Psest_4251	0.42	+1.9
4,437,539	-		Psest_4251	0.42	+0.3
4,437,539	-		Psest_4251	0.42	-0.2
4,437,539	-		Psest_4251	0.42	+0.6
4,437,539	-		Psest_4251	0.42	-0.1
4,437,539	-		Psest_4251	0.42	-0.0
4,437,603	+		Psest_4251	0.45	-0.1
4,437,604	-		Psest_4251	0.45	-0.4
4,437,647	+		Psest_4251	0.46	-0.3
4,437,647	+		Psest_4251	0.46	-1.4
4,437,647	+		Psest_4251	0.46	+0.2
4,437,647	+		Psest_4251	0.46	+2.2
4,437,647	+		Psest_4251	0.46	+2.3
4,437,647	+		Psest_4251	0.46	+0.8
4,437,647	+		Psest_4251	0.46	-1.4
4,437,647	+		Psest_4251	0.46	-0.8
4,437,648	-		Psest_4251	0.46	+0.0
4,437,648	-		Psest_4251	0.46	-1.3
4,437,648	-		Psest_4251	0.46	+0.3
4,437,648	-		Psest_4251	0.46	-1.5
4,437,648	-		Psest_4251	0.46	-0.6
4,437,655	+		Psest_4251	0.47	+0.0
4,437,656	-		Psest_4251	0.47	-0.4
4,437,656	-		Psest_4251	0.47	-0.5
4,437,677	+		Psest_4251	0.47	-0.8
4,437,677	+		Psest_4251	0.47	-0.3
4,437,678	-		Psest_4251	0.47	+0.6
4,437,759	+		Psest_4251	0.50	-0.3
4,437,759	+		Psest_4251	0.50	+0.1
4,437,759	+		Psest_4251	0.50	+1.5
4,437,759	+		Psest_4251	0.50	-1.9
4,437,759	+		Psest_4251	0.50	+2.5
4,437,759	+		Psest_4251	0.50	-0.7
4,437,759	+		Psest_4251	0.50	-1.0
4,437,759	+		Psest_4251	0.50	-1.5
4,437,759	+		Psest_4251	0.50	-1.3
4,437,760	-		Psest_4251	0.50	-0.4
4,437,760	-		Psest_4251	0.50	-0.6
4,437,760	-		Psest_4251	0.50	-0.6
4,437,760	-		Psest_4251	0.50	+0.3
4,437,760	-		Psest_4251	0.50	+0.7
4,437,760	-		Psest_4251	0.50	-0.0
4,437,760	-		Psest_4251	0.50	-0.3
4,437,855	+		Psest_4251	0.54	-0.4
4,437,855	+		Psest_4251	0.54	-0.4
4,437,855	+		Psest_4251	0.54	+1.9
4,437,856	-		Psest_4251	0.54	-1.0
4,437,856	-		Psest_4251	0.54	+0.1
4,437,967	+		Psest_4251	0.58	-0.3
4,437,968	-		Psest_4251	0.58	-1.4
4,437,968	-		Psest_4251	0.58	-1.0
4,437,987	+		Psest_4251	0.58	-1.4
4,437,987	+		Psest_4251	0.58	+1.8
4,437,987	+		Psest_4251	0.58	-0.8
4,437,988	-		Psest_4251	0.58	-1.4
4,437,988	-		Psest_4251	0.58	-3.5
4,437,988	-		Psest_4251	0.58	-0.5
4,437,988	-		Psest_4251	0.58	-0.6
4,437,988	-		Psest_4251	0.58	-0.4
4,437,988	-		Psest_4251	0.58	+0.2
4,438,148	-		Psest_4251	0.64	-1.7
4,438,150	+		Psest_4251	0.64	-0.6
4,438,151	-		Psest_4251	0.64	+1.2
4,438,151	-		Psest_4251	0.64	-0.2
4,438,151	-		Psest_4251	0.64	-0.7
4,438,151	-		Psest_4251	0.64	-0.1
4,438,151	-		Psest_4251	0.64	+0.0
4,438,195	+		Psest_4251	0.66	+0.0
4,438,195	+		Psest_4251	0.66	-0.1
4,438,195	+		Psest_4251	0.66	-1.6
4,438,196	-		Psest_4251	0.66	+1.3
4,438,246	+		Psest_4251	0.67	-0.9
4,438,247	-		Psest_4251	0.67	+1.0
4,438,501	+		Psest_4251	0.76	-0.1
4,438,501	+		Psest_4251	0.76	-1.7
4,438,502	-		Psest_4251	0.76	-0.9
4,438,587	+		Psest_4251	0.79	-0.4
4,438,607	+		Psest_4251	0.80	-0.7
4,438,629	+		Psest_4251	0.81	+0.7
4,438,629	+		Psest_4251	0.81	+1.6
4,438,630	-		Psest_4251	0.81	-1.3
4,438,630	-		Psest_4251	0.81	-0.3
4,438,686	-		Psest_4251	0.83	+0.2
4,438,868	+		Psest_4251	0.89	-1.0
4,438,886	+		Psest_4251	0.90	+0.7
4,438,915	+				-1.4
4,438,915	+				+0.4
4,438,915	+				-1.6
4,438,915	+				-1.1
4,438,915	+				-1.5
4,438,915	+				+0.2
4,438,915	+				-0.7
4,438,916	-				-2.9
4,438,916	-				-2.3
4,438,916	-				-0.7
4,438,920	-				-1.0
4,438,920	-				+1.9
4,438,920	-				-1.3
4,438,939	+				-0.4
4,438,939	+				-1.2
4,438,940	-				-0.4
4,438,988	+				-1.2
4,438,988	+				+0.2
4,438,989	-				-1.1
4,438,989	-				-0.3
4,438,989	-				-0.9
4,439,026	+				-0.0
4,439,027	-				-0.7
4,439,038	-				-0.4
4,439,093	+				+0.6
4,439,099	-				+0.3
4,439,099	-				+0.7
4,439,102	+				-0.7
4,439,103	-				-2.5
4,439,109	+				+0.8
4,439,110	-				-1.4
4,439,128	+				-0.3
4,439,170	+				+1.0
4,439,170	+				-1.2
4,439,182	-				-0.6
4,439,192	+				+1.0
4,439,244	+		Psest_4252	0.17	-0.5
4,439,301	+		Psest_4252	0.31	+0.2
4,439,339	-		Psest_4252	0.40	-0.9
4,439,390	+		Psest_4252	0.53	+1.0
4,439,401	+		Psest_4252	0.55	-0.3
4,439,402	-		Psest_4252	0.56	-0.2
4,439,402	-		Psest_4252	0.56	-2.5
4,439,480	+		Psest_4252	0.75	+1.0
4,439,554	+				-1.0
4,439,579	+				+0.1
4,439,579	+				-2.4
4,439,579	+				-2.7
4,439,579	+				-0.6
4,439,579	+				-2.3
4,439,579	+				+0.4
4,439,579	+				-0.5
4,439,580	-				-1.1
4,439,589	-				-0.9
4,439,606	+				+2.3
4,439,606	+				+0.1
4,439,606	+				+1.5
4,439,606	+				+1.2
4,439,607	-				-0.4
4,439,626	-				-0.3
4,439,630	+				+0.3
4,439,630	+				+0.8
4,439,653	+				-0.9
4,439,734	-				-1.9
4,439,734	-				-1.2
4,439,744	-				+0.3
4,439,744	-				+0.9
4,439,818	-				-0.2
4,439,818	-				+0.4
4,439,818	-				-0.7
4,439,818	-				+0.9
4,439,847	+				-0.1
4,439,871	+				-0.3
4,439,871	+				-0.4
4,439,872	-				+0.4
4,439,872	-				-0.7
4,439,907	+				-0.6
4,439,907	+				-0.5
4,439,908	-				-0.6
4,439,910	+				+0.6
4,439,910	+				+0.3
4,439,910	+				+1.9
4,439,910	+				-1.4
4,439,910	+				+0.5
4,439,911	-				-0.4
4,439,911	-				+1.7
4,439,911	-				+0.0
4,439,911	-				+0.0
4,439,911	-				+0.3
4,439,911	-				+1.1
4,439,911	-				-0.1
4,439,911	-				+0.2
4,439,913	+				-0.7
4,439,913	+				-2.9
4,439,913	+				+0.2
4,439,913	+				+2.5
4,439,913	+				+0.5
4,439,913	+				+0.8
4,439,913	+				+0.3
4,439,913	+				+1.6
4,439,914	-				+0.3
4,439,914	-				-3.5
4,439,914	-				-1.3
4,439,914	-				+0.3
4,439,949	+		Psest_4253	0.11	-2.3
4,440,010	-		Psest_4253	0.14	-0.3
4,440,123	+		Psest_4253	0.20	-0.3