Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1482

Experiment: Lactate-nitrite; anaerobic; sample3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Lactate-nitrite; anaerobic; sample3
1,585,013	+		Psest_1481	0.33	-0.6
1,585,013	+		Psest_1481	0.33	+0.4
1,585,014	-		Psest_1481	0.33	+1.0
1,585,014	-		Psest_1481	0.33	-3.0
1,585,073	+		Psest_1481	0.37	+1.2
1,585,073	+		Psest_1481	0.37	+0.1
1,585,073	+		Psest_1481	0.37	+1.4
1,585,073	+		Psest_1481	0.37	-0.6
1,585,073	+		Psest_1481	0.37	+0.3
1,585,073	+		Psest_1481	0.37	+1.0
1,585,073	+		Psest_1481	0.37	+1.4
1,585,073	+		Psest_1481	0.37	-0.8
1,585,073	+		Psest_1481	0.37	+0.6
1,585,073	+		Psest_1481	0.37	-1.8
1,585,073	+		Psest_1481	0.37	-0.1
1,585,074	-		Psest_1481	0.38	-0.7
1,585,074	-		Psest_1481	0.38	-0.1
1,585,074	-		Psest_1481	0.38	-0.3
1,585,074	-		Psest_1481	0.38	-0.0
1,585,074	-		Psest_1481	0.38	+0.0
1,585,074	-		Psest_1481	0.38	+0.0
1,585,074	-		Psest_1481	0.38	-0.2
1,585,181	+		Psest_1481	0.46	+1.2
1,585,181	+		Psest_1481	0.46	+0.1
1,585,181	+		Psest_1481	0.46	-0.3
1,585,181	+		Psest_1481	0.46	+0.4
1,585,181	+		Psest_1481	0.46	-1.4
1,585,181	+		Psest_1481	0.46	-0.2
1,585,181	+		Psest_1481	0.46	-0.2
1,585,181	+		Psest_1481	0.46	-0.3
1,585,181	+		Psest_1481	0.46	-0.5
1,585,182	-		Psest_1481	0.46	-1.3
1,585,182	-		Psest_1481	0.46	+0.7
1,585,182	-		Psest_1481	0.46	-1.6
1,585,283	+		Psest_1481	0.55	-0.9
1,585,283	+		Psest_1481	0.55	-0.7
1,585,283	+		Psest_1481	0.55	-0.6
1,585,283	+		Psest_1481	0.55	+0.7
1,585,283	+		Psest_1481	0.55	+0.4
1,585,283	+		Psest_1481	0.55	-1.2
1,585,283	+		Psest_1481	0.55	-0.9
1,585,284	-		Psest_1481	0.55	+1.1
1,585,284	-		Psest_1481	0.55	+0.6
1,585,284	-		Psest_1481	0.55	+1.0
1,585,284	-		Psest_1481	0.55	+2.0
1,585,284	-		Psest_1481	0.55	+4.8
1,585,293	-		Psest_1481	0.55	+1.7
1,585,316	+		Psest_1481	0.57	+2.7
1,585,358	+		Psest_1481	0.61	+0.4
1,585,358	+		Psest_1481	0.61	+0.8
1,585,358	+		Psest_1481	0.61	-1.5
1,585,358	+		Psest_1481	0.61	+1.6
1,585,358	+		Psest_1481	0.61	+1.6
1,585,359	-		Psest_1481	0.61	+1.8
1,585,407	+		Psest_1481	0.65	-3.3
1,585,429	+		Psest_1481	0.66	-0.9
1,585,539	+		Psest_1481	0.75	-0.2
1,585,569	+		Psest_1481	0.78	+0.4
1,585,569	+		Psest_1481	0.78	-0.3
1,585,569	+		Psest_1481	0.78	-0.2
1,585,569	+		Psest_1481	0.78	+0.4
1,585,569	+		Psest_1481	0.78	-0.7
1,585,569	+		Psest_1481	0.78	+1.6
1,585,570	-		Psest_1481	0.78	+0.3
1,585,570	-		Psest_1481	0.78	-0.6
1,585,649	+		Psest_1481	0.84	-0.1
1,585,649	+		Psest_1481	0.84	+0.9
1,585,956	+				-0.6
1,585,956	+				-0.4
1,585,957	-				+0.8
1,585,957	-				-0.6
1,585,957	-				-0.8
1,585,957	-				-1.1
1,586,008	+		Psest_1482	0.13	-1.1
1,586,008	+		Psest_1482	0.13	-2.1
1,586,008	+		Psest_1482	0.13	-0.3
1,586,008	+		Psest_1482	0.13	-1.6
1,586,008	+		Psest_1482	0.13	-0.3
1,586,008	+		Psest_1482	0.13	-1.4
1,586,008	+		Psest_1482	0.13	+0.5
1,586,008	+		Psest_1482	0.13	-0.1
1,586,008	+		Psest_1482	0.13	-1.2
1,586,009	-		Psest_1482	0.13	+2.0
1,586,009	-		Psest_1482	0.13	-0.2
1,586,009	-		Psest_1482	0.13	+0.6
1,586,009	-		Psest_1482	0.13	-0.6
1,586,009	-		Psest_1482	0.13	+0.1
1,586,009	-		Psest_1482	0.13	+1.2
1,586,009	-		Psest_1482	0.13	-2.7
1,586,009	-		Psest_1482	0.13	-1.6
1,586,009	-		Psest_1482	0.13	-0.4
1,586,010	+		Psest_1482	0.14	-0.4
1,586,010	+		Psest_1482	0.14	+1.1
1,586,010	+		Psest_1482	0.14	-0.8
1,586,010	+		Psest_1482	0.14	-0.5
1,586,010	+		Psest_1482	0.14	-1.0
1,586,010	+		Psest_1482	0.14	-1.3
1,586,010	+		Psest_1482	0.14	-2.6
1,586,010	+		Psest_1482	0.14	+0.5
1,586,010	+		Psest_1482	0.14	-1.6
1,586,010	+		Psest_1482	0.14	-1.9
1,586,010	+		Psest_1482	0.14	+2.2
1,586,011	-		Psest_1482	0.14	-0.8
1,586,011	-		Psest_1482	0.14	-0.0
1,586,012	+		Psest_1482	0.15	+0.4
1,586,012	+		Psest_1482	0.15	-0.4
1,586,012	+		Psest_1482	0.15	+0.4
1,586,012	+		Psest_1482	0.15	+0.4
1,586,012	+		Psest_1482	0.15	-1.3
1,586,012	+		Psest_1482	0.15	-0.3
1,586,012	+		Psest_1482	0.15	+0.4
1,586,012	+		Psest_1482	0.15	+0.5
1,586,012	+		Psest_1482	0.15	-0.3
1,586,012	+		Psest_1482	0.15	-0.8
1,586,012	+		Psest_1482	0.15	-0.3
1,586,012	+		Psest_1482	0.15	-0.7
1,586,012	+		Psest_1482	0.15	-0.8
1,586,012	+		Psest_1482	0.15	+1.4
1,586,012	+		Psest_1482	0.15	-0.8
1,586,012	+		Psest_1482	0.15	-1.9
1,586,012	+		Psest_1482	0.15	-1.5
1,586,012	+		Psest_1482	0.15	-1.5
1,586,012	+		Psest_1482	0.15	+0.5
1,586,013	-		Psest_1482	0.15	+0.4
1,586,013	-		Psest_1482	0.15	-0.2
1,586,013	-		Psest_1482	0.15	-1.0
1,586,153	+		Psest_1482	0.86	-0.6
1,586,192	+				+0.2
1,586,285	+		Psest_1483	0.26	-0.3
1,586,285	+		Psest_1483	0.26	+1.0
1,586,286	-		Psest_1483	0.26	-0.2
1,586,286	-		Psest_1483	0.26	-0.6
1,586,337	-		Psest_1483	0.39	+2.2
1,586,342	+		Psest_1483	0.40	+1.4
1,586,342	+		Psest_1483	0.40	+1.2
1,586,342	+		Psest_1483	0.40	-0.2
1,586,342	+		Psest_1483	0.40	+0.0
1,586,410	-		Psest_1483	0.58	+0.1
1,586,496	+		Psest_1483	0.80	+2.1
1,586,496	+		Psest_1483	0.80	-0.6
1,586,496	+		Psest_1483	0.80	-0.2
1,586,497	-		Psest_1483	0.80	-0.1
1,586,611	+				+2.0
1,586,612	-				-0.1
1,586,613	+				+0.4
1,586,613	+				-0.3
1,586,613	+				-0.9
1,586,613	+				+0.2
1,586,613	+				+0.2
1,586,613	+				-1.4
1,586,614	-				-0.0
1,586,614	-				-0.7
1,586,614	-				+2.6
1,586,614	-				-0.3
1,586,798	+				-0.7
1,586,798	+				-0.2
1,586,798	+				-0.6
1,586,799	-				+0.2
1,586,918	+		Psest_1484	0.26	-0.5
1,586,918	+		Psest_1484	0.26	+2.0
1,586,919	-		Psest_1484	0.26	-1.0
1,586,919	-		Psest_1484	0.26	-0.9
1,586,919	-		Psest_1484	0.26	+1.4
1,586,937	+		Psest_1484	0.30	+0.5
1,586,938	-		Psest_1484	0.30	-0.5
1,586,938	-		Psest_1484	0.30	+0.4
1,586,938	-		Psest_1484	0.30	-0.2
1,586,967	-		Psest_1484	0.37	+0.9
1,586,984	+		Psest_1484	0.40	-0.2
1,586,984	+		Psest_1484	0.40	-0.7
1,586,984	+		Psest_1484	0.40	-0.5
1,586,984	+		Psest_1484	0.40	-0.2
1,586,984	+		Psest_1484	0.40	+0.8
1,586,984	+		Psest_1484	0.40	-1.2
1,586,985	-		Psest_1484	0.41	+0.1
1,586,987	+		Psest_1484	0.41	-0.6
1,586,987	+		Psest_1484	0.41	-0.1
1,586,987	+		Psest_1484	0.41	-0.9
1,586,996	+		Psest_1484	0.43	-0.6
1,587,125	+		Psest_1484	0.71	-1.2
1,587,159	+		Psest_1484	0.78	-0.4
1,587,159	+		Psest_1484	0.78	-0.9
1,587,159	+		Psest_1484	0.78	-0.7
1,587,159	+		Psest_1484	0.78	+0.3
1,587,159	+		Psest_1484	0.78	-0.9
1,587,159	+		Psest_1484	0.78	-0.4
1,587,159	+		Psest_1484	0.78	-0.0
1,587,159	+		Psest_1484	0.78	+1.4
1,587,160	-		Psest_1484	0.79	+1.3
1,587,160	-		Psest_1484	0.79	-0.2
1,587,160	-		Psest_1484	0.79	+0.1
1,587,160	-		Psest_1484	0.79	+2.9
1,587,160	-		Psest_1484	0.79	-0.2
1,587,160	-		Psest_1484	0.79	+0.8
1,587,160	-		Psest_1484	0.79	-0.7
1,587,160	-		Psest_1484	0.79	-0.6
1,587,160	-		Psest_1484	0.79	+0.8