Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1944

Experiment: Lactate-nitrate; anaerobic; dichromate stress sample3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Lactate-nitrate; anaerobic; dichromate stress sample3
2,056,343	-		Psest_1943	0.22	-0.2
2,056,407	+		Psest_1943	0.29	+0.1
2,056,407	+		Psest_1943	0.29	+1.2
2,056,407	+		Psest_1943	0.29	-0.2
2,056,414	+		Psest_1943	0.30	-1.0
2,056,414	+		Psest_1943	0.30	+0.8
2,056,438	+		Psest_1943	0.32	-0.6
2,056,438	+		Psest_1943	0.32	-0.4
2,056,438	+		Psest_1943	0.32	+1.0
2,056,438	+		Psest_1943	0.32	-0.0
2,056,438	+		Psest_1943	0.32	-0.8
2,056,438	+		Psest_1943	0.32	-0.8
2,056,438	+		Psest_1943	0.32	+0.0
2,056,438	+		Psest_1943	0.32	-0.4
2,056,438	+		Psest_1943	0.32	-1.0
2,056,438	+		Psest_1943	0.32	+0.5
2,056,439	-		Psest_1943	0.32	-0.6
2,056,439	-		Psest_1943	0.32	+2.7
2,056,439	-		Psest_1943	0.32	+0.8
2,056,624	+		Psest_1943	0.52	-0.6
2,056,625	-		Psest_1943	0.52	+0.4
2,056,687	+		Psest_1943	0.58	+2.3
2,056,687	+		Psest_1943	0.58	+0.3
2,056,687	+		Psest_1943	0.58	+0.2
2,056,688	-		Psest_1943	0.58	+1.3
2,056,691	+		Psest_1943	0.59	-1.5
2,056,692	-		Psest_1943	0.59	+0.4
2,056,840	+		Psest_1943	0.74	-0.2
2,056,840	+		Psest_1943	0.74	-2.4
2,056,976	+		Psest_1943	0.88	-0.1
2,056,976	+		Psest_1943	0.88	+1.3
2,056,976	+		Psest_1943	0.88	-0.8
2,057,296	+				-1.1
2,057,296	+				-1.3
2,057,297	-				-1.1
2,057,297	-				+0.1
2,057,297	-				-0.1
2,057,297	-				-2.2
2,057,297	-				-1.8
2,057,297	-				+0.1
2,057,358	-				-1.2
2,057,369	+				+0.2
2,057,369	+				-0.0
2,057,369	+				-2.8
2,057,369	+				-2.4
2,057,369	+				-0.8
2,057,370	-				-1.6
2,057,370	-				-0.6
2,057,370	-				-0.6
2,057,370	-				-0.2
2,057,370	-				-1.4
2,057,370	-				-2.8
2,057,370	-				-2.1
2,057,370	-				-1.4
2,058,148	+		Psest_1944	0.18	-1.0
2,058,148	+		Psest_1944	0.18	+1.0
2,058,307	+		Psest_1944	0.21	-0.2
2,058,556	+		Psest_1944	0.26	+0.2
2,058,557	-		Psest_1944	0.26	-0.8
2,058,557	-		Psest_1944	0.26	-2.0
2,058,567	-		Psest_1944	0.26	-2.6
2,058,567	-		Psest_1944	0.26	-0.8
2,058,567	-		Psest_1944	0.26	-0.5
2,058,567	-		Psest_1944	0.26	-1.2
2,058,567	-		Psest_1944	0.26	-1.2
2,058,568	+		Psest_1944	0.26	-1.8
2,058,568	+		Psest_1944	0.26	-1.8
2,058,568	+		Psest_1944	0.26	+0.4
2,058,569	-		Psest_1944	0.26	-1.4
2,058,569	-		Psest_1944	0.26	-2.1
2,058,569	-		Psest_1944	0.26	-0.6
2,058,569	-		Psest_1944	0.26	+0.8
2,058,569	-		Psest_1944	0.26	-1.2
2,058,569	-		Psest_1944	0.26	-0.7
2,058,569	-		Psest_1944	0.26	-2.1
2,058,569	-		Psest_1944	0.26	-0.5
2,058,569	-		Psest_1944	0.26	-1.2
2,058,569	-		Psest_1944	0.26	-0.8
2,058,569	-		Psest_1944	0.26	-1.4
2,058,569	-		Psest_1944	0.26	-2.0
2,058,586	+		Psest_1944	0.27	-1.1
2,058,586	+		Psest_1944	0.27	-2.3
2,058,586	+		Psest_1944	0.27	-0.8
2,058,586	+		Psest_1944	0.27	-0.4
2,058,587	-		Psest_1944	0.27	+1.1
2,058,587	-		Psest_1944	0.27	-1.8
2,058,664	+		Psest_1944	0.28	-0.6
2,058,664	+		Psest_1944	0.28	-1.6
2,058,664	+		Psest_1944	0.28	-3.0
2,058,665	-		Psest_1944	0.28	-1.1
2,058,665	-		Psest_1944	0.28	-0.8
2,058,665	-		Psest_1944	0.28	-2.8
2,058,665	-		Psest_1944	0.28	-2.8
2,058,665	-		Psest_1944	0.28	+1.8
2,058,743	+		Psest_1944	0.30	-1.0
2,058,967	+		Psest_1944	0.34	+0.3
2,058,967	+		Psest_1944	0.34	-0.2
2,058,968	-		Psest_1944	0.34	-1.5
2,059,013	-		Psest_1944	0.35	-0.3
2,059,127	-		Psest_1944	0.38	-1.5
2,059,153	+		Psest_1944	0.38	-1.4
2,059,153	+		Psest_1944	0.38	-1.8
2,059,153	+		Psest_1944	0.38	+0.8
2,059,154	-		Psest_1944	0.38	-1.0
2,059,218	+		Psest_1944	0.40	-2.0
2,059,218	+		Psest_1944	0.40	-1.1
2,059,219	-		Psest_1944	0.40	-0.1
2,059,219	-		Psest_1944	0.40	+0.2
2,059,219	-		Psest_1944	0.40	-2.2
2,059,219	-		Psest_1944	0.40	+0.1
2,059,222	+		Psest_1944	0.40	-2.0
2,059,222	+		Psest_1944	0.40	+0.2
2,059,222	+		Psest_1944	0.40	-1.9
2,059,222	+		Psest_1944	0.40	-0.4
2,059,222	+		Psest_1944	0.40	-1.1
2,059,223	-		Psest_1944	0.40	-0.4
2,059,223	-		Psest_1944	0.40	+0.8
2,059,223	-		Psest_1944	0.40	+1.8
2,059,223	-		Psest_1944	0.40	-2.8
2,059,223	-		Psest_1944	0.40	-1.2
2,059,310	-		Psest_1944	0.41	-0.9
2,059,426	+		Psest_1944	0.44	+0.2
2,059,427	-		Psest_1944	0.44	-2.6
2,059,427	-		Psest_1944	0.44	-1.5
2,059,427	-		Psest_1944	0.44	+0.5
2,059,427	-		Psest_1944	0.44	-0.8
2,059,618	+		Psest_1944	0.48	-1.5
2,059,618	+		Psest_1944	0.48	-0.2
2,059,618	+		Psest_1944	0.48	-1.0
2,059,678	+		Psest_1944	0.49	+0.2
2,059,678	+		Psest_1944	0.49	+0.0
2,059,678	+		Psest_1944	0.49	-0.3
2,059,679	-		Psest_1944	0.49	+0.2
2,059,932	-		Psest_1944	0.54	+1.8
2,060,027	-		Psest_1944	0.56	-1.0
2,060,034	-		Psest_1944	0.56	-0.5
2,060,036	+		Psest_1944	0.56	-0.8
2,060,036	+		Psest_1944	0.56	+0.0
2,060,037	-		Psest_1944	0.56	-2.0
2,060,037	-		Psest_1944	0.56	+1.4
2,060,037	-		Psest_1944	0.56	-1.0
2,060,037	-		Psest_1944	0.56	-2.2
2,060,037	-		Psest_1944	0.56	-2.5
2,060,037	-		Psest_1944	0.56	-1.2
2,060,428	+		Psest_1944	0.65	-1.1
2,060,429	-		Psest_1944	0.65	-0.6
2,060,460	+		Psest_1944	0.65	-0.9
2,060,461	-		Psest_1944	0.65	-1.8
2,060,611	+		Psest_1944	0.68	-2.8
2,060,611	+		Psest_1944	0.68	+0.4
2,060,612	-		Psest_1944	0.68	-0.5
2,060,612	-		Psest_1944	0.68	-0.8
2,060,612	-		Psest_1944	0.68	+0.4
2,060,612	-		Psest_1944	0.68	-0.5
2,060,612	-		Psest_1944	0.68	-0.4
2,060,612	-		Psest_1944	0.68	-0.6
2,060,612	-		Psest_1944	0.68	-1.6
2,060,947	+		Psest_1944	0.75	-3.2
2,060,947	+		Psest_1944	0.75	-1.0
2,060,947	+		Psest_1944	0.75	+1.7
2,060,948	-		Psest_1944	0.75	-1.5
2,060,948	-		Psest_1944	0.75	-1.2
2,060,948	-		Psest_1944	0.75	-1.8
2,060,948	-		Psest_1944	0.75	-2.4
2,061,007	+		Psest_1944	0.76	-1.5
2,061,007	+		Psest_1944	0.76	+0.2
2,061,007	+		Psest_1944	0.76	-0.2
2,061,007	+		Psest_1944	0.76	+0.4
2,061,008	-		Psest_1944	0.76	-0.5
2,061,008	-		Psest_1944	0.76	+1.8
2,061,131	+		Psest_1944	0.79	-1.4
2,061,137	+		Psest_1944	0.79	-0.6
2,061,148	+		Psest_1944	0.79	-2.0
2,061,148	+		Psest_1944	0.79	+0.8
2,061,150	+		Psest_1944	0.79	+0.0
2,061,206	-		Psest_1944	0.81	-1.1
2,061,683	-				-2.0
2,061,743	-				-2.5
2,061,743	-				-2.0
2,061,811	+				-1.5
2,061,812	-				+1.1
2,061,847	+				+0.1
2,061,847	+				+2.8
2,061,847	+				-1.0
2,061,848	-				-0.4
2,062,084	+				-0.2
2,062,084	+				+0.3
2,062,084	+				-1.2
2,062,085	-				+0.8
2,062,091	+				-1.0
2,062,093	+				-0.5
2,062,093	+				-0.5
2,062,093	+				-0.6
2,062,093	+				-1.3
2,062,093	+				-1.0
2,062,093	+				-0.8
2,062,093	+				-1.9
2,062,093	+				-1.2
2,062,093	+				+1.1
2,062,093	+				-0.9
2,062,093	+				-3.2
2,062,094	-				-0.4
2,062,094	-				-0.5
2,062,245	+				-1.2
2,062,260	-				+0.4
2,062,447	-		Psest_1945	0.17	+2.1
2,062,453	+		Psest_1945	0.18	+0.2
2,062,454	-		Psest_1945	0.18	-1.1
2,062,644	-		Psest_1945	0.39	+0.4
2,062,692	-		Psest_1945	0.44	-1.4
2,062,692	-		Psest_1945	0.44	-0.8
2,062,713	+		Psest_1945	0.46	-0.6
2,062,790	+		Psest_1945	0.55	-0.2
2,062,790	+		Psest_1945	0.55	-2.2
2,062,790	+		Psest_1945	0.55	-0.2
2,062,791	-		Psest_1945	0.55	+0.5