Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2027

Experiment: Lactate-nitrate; anaerobic; dichromate stress sample1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Lactate-nitrate; anaerobic; dichromate stress sample1
2,145,736	+				+0.5
2,145,736	+				+0.3
2,145,736	+				+0.5
2,145,736	+				+0.9
2,145,736	+				+0.9
2,145,736	+				-1.1
2,145,736	+				-1.3
2,145,736	+				+0.9
2,145,737	-				-0.5
2,145,737	-				-1.1
2,145,737	-				-0.0
2,145,737	-				+0.4
2,145,737	-				+1.3
2,145,737	-				+0.5
2,145,740	+				+0.5
2,145,741	-				-1.7
2,146,008	+		Psest_2025	0.78	-0.5
2,146,059	+				+1.0
2,146,059	+				+0.1
2,146,060	-				+0.4
2,146,060	-				+0.2
2,146,101	+				-1.1
2,146,101	+				-0.6
2,146,101	+				+0.3
2,146,124	+				-0.4
2,146,167	+				-0.8
2,146,168	-				-1.4
2,146,175	+				+0.3
2,146,175	+				-0.2
2,146,176	-				-0.2
2,146,176	-				+1.2
2,146,184	+				-0.3
2,146,185	-				-3.6
2,146,241	-				-1.4
2,146,245	-				-0.5
2,146,245	-				-1.2
2,146,245	-				-0.5
2,146,245	-				-1.4
2,146,268	-				-1.5
2,146,308	+				-1.1
2,146,308	+				-1.1
2,146,308	+				-1.2
2,146,403	+		Psest_2026	0.33	-2.6
2,146,404	-		Psest_2026	0.33	-3.6
2,146,404	-		Psest_2026	0.33	-0.5
2,146,404	-		Psest_2026	0.33	-2.8
2,146,404	-		Psest_2026	0.33	-1.7
2,146,404	-		Psest_2026	0.33	-1.0
2,146,404	-		Psest_2026	0.33	-2.9
2,146,405	+		Psest_2026	0.34	-1.8
2,146,405	+		Psest_2026	0.34	-2.4
2,146,405	+		Psest_2026	0.34	-0.9
2,146,405	+		Psest_2026	0.34	-0.1
2,146,405	+		Psest_2026	0.34	-0.3
2,146,405	+		Psest_2026	0.34	-1.3
2,146,405	+		Psest_2026	0.34	-0.5
2,146,406	-		Psest_2026	0.34	-1.3
2,146,406	-		Psest_2026	0.34	-1.1
2,146,406	-		Psest_2026	0.34	-1.9
2,146,406	-		Psest_2026	0.34	-2.0
2,146,406	-		Psest_2026	0.34	-1.5
2,146,406	-		Psest_2026	0.34	+0.1
2,146,406	-		Psest_2026	0.34	-1.5
2,146,406	-		Psest_2026	0.34	-1.3
2,146,406	-		Psest_2026	0.34	-1.6
2,146,420	+		Psest_2026	0.38	+0.5
2,146,421	-		Psest_2026	0.38	-2.9
2,146,431	-		Psest_2026	0.41	-1.5
2,146,547	+		Psest_2026	0.73	-2.1
2,146,547	+		Psest_2026	0.73	-1.8
2,146,548	-		Psest_2026	0.73	-1.7
2,146,592	+		Psest_2026	0.85	-0.9
2,146,592	+		Psest_2026	0.85	-0.8
2,146,593	-		Psest_2026	0.85	-1.1
2,146,674	+				-1.5
2,146,674	+				-1.1
2,146,674	+				-0.8
2,146,675	-				-1.7
2,146,675	-				-2.2
2,146,675	-				+0.5
2,146,675	-				-0.5
2,146,675	-				-2.1
2,146,675	-				-2.2
2,146,728	+				-0.5
2,146,728	+				-1.5
2,146,879	-				-3.9
2,147,083	+		Psest_2027	0.18	-3.5
2,147,084	-		Psest_2027	0.18	-0.5
2,147,084	-		Psest_2027	0.18	-1.3
2,147,084	-		Psest_2027	0.18	-1.5
2,147,084	-		Psest_2027	0.18	-0.7
2,147,084	-		Psest_2027	0.18	-1.0
2,147,084	-		Psest_2027	0.18	-2.9
2,147,200	+		Psest_2027	0.23	+0.1
2,147,200	+		Psest_2027	0.23	-0.1
2,147,200	+		Psest_2027	0.23	+0.1
2,147,201	-		Psest_2027	0.23	+0.2
2,147,201	-		Psest_2027	0.23	-2.9
2,147,201	-		Psest_2027	0.23	-0.6
2,147,253	-		Psest_2027	0.25	-0.5
2,147,423	-		Psest_2027	0.33	+0.5
2,147,447	+		Psest_2027	0.34	-1.5
2,147,454	+		Psest_2027	0.34	-0.1
2,147,550	+		Psest_2027	0.39	-0.1
2,147,603	+		Psest_2027	0.41	-1.1
2,147,803	+		Psest_2027	0.50	-0.8
2,147,804	-		Psest_2027	0.50	-2.5
2,147,848	+		Psest_2027	0.52	-1.5
2,147,848	+		Psest_2027	0.52	+0.5
2,147,848	+		Psest_2027	0.52	-1.5
2,147,849	-		Psest_2027	0.52	-1.2
2,147,849	-		Psest_2027	0.52	+0.5
2,147,849	-		Psest_2027	0.52	-0.8
2,147,850	+		Psest_2027	0.52	-1.9
2,147,850	+		Psest_2027	0.52	-1.0
2,147,850	+		Psest_2027	0.52	-1.1
2,147,850	+		Psest_2027	0.52	-0.5
2,147,851	-		Psest_2027	0.52	-1.8
2,147,865	+		Psest_2027	0.52	-0.1
2,147,866	-		Psest_2027	0.52	-0.1
2,147,866	-		Psest_2027	0.52	-0.8
2,147,909	-		Psest_2027	0.54	-2.3
2,148,256	+		Psest_2027	0.70	-2.5
2,148,257	-		Psest_2027	0.70	-0.8
2,148,258	+		Psest_2027	0.70	-2.3
2,148,258	+		Psest_2027	0.70	-1.2
2,148,259	-		Psest_2027	0.70	-0.8
2,148,259	-		Psest_2027	0.70	-1.2
2,148,259	-		Psest_2027	0.70	+0.1
2,148,304	+		Psest_2027	0.72	-1.1
2,148,329	+		Psest_2027	0.73	-0.5
2,148,329	+		Psest_2027	0.73	-0.5
2,148,329	+		Psest_2027	0.73	-1.3
2,148,330	-		Psest_2027	0.73	+0.2
2,148,477	+		Psest_2027	0.79	-2.1
2,148,543	+		Psest_2027	0.82	-0.3
2,148,543	+		Psest_2027	0.82	-0.2
2,148,621	+		Psest_2027	0.86	-2.9
2,148,769	+				+2.1
2,148,769	+				-0.6
2,149,450	+				-1.5
2,149,451	-				-0.6
2,149,451	-				+0.5
2,149,451	-				-0.6
2,149,579	+		Psest_2029	0.27	-1.2
2,149,588	+		Psest_2029	0.28	-1.8
2,149,588	+		Psest_2029	0.28	+1.0
2,149,589	-		Psest_2029	0.28	+0.0
2,149,607	+		Psest_2029	0.31	-1.1
2,149,700	+		Psest_2029	0.44	-3.2
2,149,700	+		Psest_2029	0.44	+0.2
2,149,726	+		Psest_2029	0.48	-3.1
2,149,726	+		Psest_2029	0.48	-1.4
2,149,727	-		Psest_2029	0.48	+0.5
2,149,731	-		Psest_2029	0.48	+1.2
2,149,758	-		Psest_2029	0.52	+0.5
2,149,759	+		Psest_2029	0.52	-0.1
2,149,759	+		Psest_2029	0.52	-0.5
2,149,759	+		Psest_2029	0.52	-1.3
2,149,759	+		Psest_2029	0.52	-1.3
2,149,759	+		Psest_2029	0.52	-0.5
2,149,759	+		Psest_2029	0.52	-2.3
2,149,759	+		Psest_2029	0.52	+0.8
2,149,759	+		Psest_2029	0.52	-2.5
2,149,759	+		Psest_2029	0.52	-0.4
2,149,760	-		Psest_2029	0.52	-0.7
2,149,760	-		Psest_2029	0.52	-0.4
2,149,760	-		Psest_2029	0.52	-0.1
2,149,760	-		Psest_2029	0.52	-1.6
2,149,760	-		Psest_2029	0.52	-0.4
2,149,768	+		Psest_2029	0.54	-1.3
2,149,768	+		Psest_2029	0.54	+0.0
2,149,768	+		Psest_2029	0.54	-0.9
2,149,769	-		Psest_2029	0.54	-2.9
2,149,769	-		Psest_2029	0.54	-0.9
2,149,775	+		Psest_2029	0.55	-0.2
2,149,775	+		Psest_2029	0.55	-0.8
2,149,776	-		Psest_2029	0.55	-2.6
2,149,777	+		Psest_2029	0.55	+0.0
2,149,778	-		Psest_2029	0.55	-2.1