Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1095

Experiment: Lactate-nitrate; anaerobic; cadmium stress sample1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Lactate-nitrate; anaerobic; cadmium stress sample1
1,185,926	-				-0.6
1,185,948	-				+1.3
1,185,980	+				-0.5
1,185,991	+				-0.7
1,185,992	-				-1.2
1,185,992	-				+0.4
1,185,995	+				-0.1
1,185,995	+				+0.9
1,185,995	+				+0.0
1,185,995	+				-0.4
1,185,995	+				+0.9
1,185,995	+				+0.1
1,185,995	+				+1.9
1,185,995	+				+0.9
1,185,995	+				+1.4
1,185,995	+				-1.2
1,185,995	+				+0.4
1,185,996	-				+1.0
1,185,996	-				-1.2
1,185,996	-				+1.3
1,185,996	-				+1.1
1,185,996	-				+1.1
1,186,117	+				+0.2
1,186,118	-				-2.5
1,186,118	-				+2.4
1,186,118	-				-0.2
1,186,131	+				+0.4
1,186,131	+				-0.1
1,186,131	+				-0.2
1,186,131	+				+2.7
1,186,131	+				-1.6
1,186,131	+				+1.6
1,186,131	+				-0.3
1,186,131	+				-0.1
1,186,131	+				+0.6
1,186,131	+				-0.2
1,186,131	+				-0.2
1,186,131	+				-0.6
1,186,132	-				+0.4
1,186,132	-				+0.2
1,186,132	-				+0.4
1,186,132	-				+2.1
1,186,132	-				+0.5
1,186,132	-				+1.7
1,186,132	-				-0.0
1,186,150	+				-0.1
1,186,150	+				-0.6
1,186,151	-				+0.7
1,186,151	-				+0.7
1,186,188	+				+0.6
1,186,188	+				+0.2
1,186,189	-				+0.0
1,186,189	-				-0.4
1,186,210	+				-0.7
1,186,210	+				-0.6
1,186,210	+				-0.8
1,186,210	+				-0.6
1,186,210	+				+0.4
1,186,211	-				-0.5
1,186,211	-				-1.2
1,186,211	-				-0.0
1,186,211	-				+0.1
1,186,211	-				-1.0
1,186,211	-				-0.1
1,186,211	-				-0.2
1,186,211	-				+0.1
1,186,211	-				-0.6
1,186,211	-				-0.2
1,186,256	-				+0.4
1,186,256	-				+2.2
1,186,286	-				-0.2
1,186,362	+				-1.6
1,186,363	-				+1.4
1,186,363	-				+1.5
1,186,363	-				+0.5
1,186,363	-				+1.3
1,186,363	-				+0.6
1,186,417	-				-1.2
1,186,454	+				-2.6
1,186,454	+				-2.0
1,186,454	+				+1.4
1,186,454	+				-1.8
1,186,454	+				-1.6
1,186,454	+				-0.6
1,186,455	-				+0.1
1,186,455	-				+1.5
1,186,455	-				+0.6
1,186,455	-				+0.4
1,186,455	-				-2.1
1,186,455	-				-0.1
1,186,455	-				+0.1
1,186,455	-				+0.7
1,186,458	-				-0.5
1,186,458	-				+0.9
1,186,458	-				+0.7
1,186,458	-				-1.2
1,186,614	+				+0.5
1,186,615	-				-0.2
1,186,645	+				-1.1
1,186,645	+				-0.5
1,186,645	+				-3.7
1,186,645	+				-0.3
1,186,645	+				-0.2
1,186,645	+				-0.1
1,186,645	+				+0.2
1,186,646	-				-0.4
1,186,646	-				-0.9
1,186,646	-				-0.7
1,186,646	-				+1.5
1,186,646	-				-1.8
1,186,647	+				+2.3
1,186,647	+				+0.2
1,186,683	+				+0.3
1,186,684	-				+1.5
1,186,687	+				-0.8
1,186,687	+				+0.3
1,186,687	+				+4.3
1,186,687	+				-1.3
1,186,687	+				-2.2
1,186,687	+				-0.8
1,186,687	+				+0.0
1,186,688	+				-0.4
1,186,688	-				+1.4
1,186,688	-				-0.9
1,186,688	-				-0.9
1,186,688	-				-1.6
1,186,688	-				+1.1
1,186,688	-				-0.3
1,186,688	-				-1.1
1,186,740	-		Psest_1095	0.13	+2.1
1,186,805	+		Psest_1095	0.20	-0.0
1,186,805	+		Psest_1095	0.20	+0.9
1,186,805	+		Psest_1095	0.20	-1.6
1,186,805	+		Psest_1095	0.20	-0.4
1,186,805	+		Psest_1095	0.20	-0.6
1,186,805	+		Psest_1095	0.20	-0.6
1,186,806	-		Psest_1095	0.20	+0.5
1,186,806	-		Psest_1095	0.20	-0.8
1,186,806	-		Psest_1095	0.20	-1.3
1,186,806	-		Psest_1095	0.20	-0.1
1,186,806	-		Psest_1095	0.20	+0.4
1,186,806	-		Psest_1095	0.20	-1.8
1,186,806	-		Psest_1095	0.20	+0.5
1,186,806	-		Psest_1095	0.20	+1.4
1,186,946	-		Psest_1095	0.37	+0.5
1,186,946	-		Psest_1095	0.37	+1.7
1,187,012	+		Psest_1095	0.44	-0.5
1,187,012	+		Psest_1095	0.44	+3.8
1,187,030	+		Psest_1095	0.46	+0.6
1,187,083	+		Psest_1095	0.52	+0.0
1,187,083	+		Psest_1095	0.52	-1.8
1,187,083	+		Psest_1095	0.52	+0.4
1,187,181	-		Psest_1095	0.64	-0.7
1,187,181	-		Psest_1095	0.64	-0.8
1,187,239	+		Psest_1095	0.70	-1.7
1,187,239	+		Psest_1095	0.70	-0.2
1,187,239	+		Psest_1095	0.70	-1.6
1,187,239	+		Psest_1095	0.70	+0.9
1,187,239	+		Psest_1095	0.70	+1.2
1,187,240	-		Psest_1095	0.71	+1.1
1,187,240	-		Psest_1095	0.71	+0.3
1,187,240	-		Psest_1095	0.71	-1.3
1,187,240	-		Psest_1095	0.71	+0.6
1,187,240	-		Psest_1095	0.71	+0.3
1,187,240	-		Psest_1095	0.71	+0.0
1,187,240	-		Psest_1095	0.71	-1.1
1,187,240	-		Psest_1095	0.71	+1.0
1,187,260	+		Psest_1095	0.73	-0.2
1,187,260	+		Psest_1095	0.73	-0.2
1,187,260	+		Psest_1095	0.73	-0.3
1,187,260	+				-0.6
1,187,260	+		Psest_1095	0.73	+0.1
1,187,260	+		Psest_1095	0.73	-1.5
1,187,260	+		Psest_1095	0.73	+0.2
1,187,261	-		Psest_1095	0.73	+1.1
1,187,261	-		Psest_1095	0.73	+0.8
1,187,261	-		Psest_1095	0.73	-0.6
1,187,296	-		Psest_1095	0.77	-0.1
1,187,296	-		Psest_1095	0.77	-2.2
1,187,296	-		Psest_1095	0.77	-3.7
1,187,296	-		Psest_1095	0.77	+0.4
1,187,317	+		Psest_1095	0.80	-0.9
1,187,480	-				+1.2
1,187,480	-				-1.6
1,187,480	-				+1.4
1,187,694	-		Psest_1096	0.13	-2.3
1,187,745	+		Psest_1096	0.18	+3.4
1,187,763	+		Psest_1096	0.20	-1.2
1,187,763	+		Psest_1096	0.20	+0.4
1,187,816	+		Psest_1096	0.25	+0.4
1,187,816	+		Psest_1096	0.25	+1.5
1,187,816	+		Psest_1096	0.25	-1.0
1,187,817	-		Psest_1096	0.25	+0.7
1,187,817	-		Psest_1096	0.25	+1.8
1,187,824	+		Psest_1096	0.26	+0.4
1,187,873	+		Psest_1096	0.30	+0.1
1,187,873	+		Psest_1096	0.30	+0.9
1,187,874	-		Psest_1096	0.30	+1.6
1,187,874	-		Psest_1096	0.30	+1.7
1,187,901	+		Psest_1096	0.33	+0.2
1,187,902	-		Psest_1096	0.33	+0.4
1,187,955	+		Psest_1096	0.38	+1.8
1,187,979	+		Psest_1096	0.40	+2.5
1,187,979	+		Psest_1096	0.40	+0.7
1,187,980	-		Psest_1096	0.40	+0.4
1,187,980	-		Psest_1096	0.40	+1.9
1,187,980	-		Psest_1096	0.40	+0.4
1,188,043	-		Psest_1096	0.46	-0.6
1,188,060	+		Psest_1096	0.47	+0.1
1,188,060	+		Psest_1096	0.47	+0.5
1,188,060	+		Psest_1096	0.47	+2.0
1,188,061	-		Psest_1096	0.48	-1.0
1,188,069	+		Psest_1096	0.48	+1.1
1,188,070	-		Psest_1096	0.48	-1.1
1,188,091	-		Psest_1096	0.50	-0.9
1,188,091	-		Psest_1096	0.50	-1.2
1,188,139	+		Psest_1096	0.55	-1.1
1,188,140	-		Psest_1096	0.55	+1.7
1,188,225	+		Psest_1096	0.63	-2.6
1,188,225	+		Psest_1096	0.63	+0.4
1,188,408	+		Psest_1096	0.80	+1.4
1,188,409	-		Psest_1096	0.80	+1.2