Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3407

Experiment: Lactate-nitrate; anaerobic; copper stress sample1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Lactate-nitrate; anaerobic; copper stress sample1
3,575,564	+		Psest_3406	0.26	+0.2
3,575,564	+		Psest_3406	0.26	+0.1
3,575,568	-		Psest_3406	0.26	-0.8
3,575,568	-		Psest_3406	0.26	-0.0
3,575,594	+		Psest_3406	0.28	-0.3
3,575,595	-		Psest_3406	0.28	+0.9
3,575,595	-		Psest_3406	0.28	+1.0
3,575,644	+		Psest_3406	0.32	+0.3
3,575,645	-		Psest_3406	0.32	+0.9
3,575,645	-		Psest_3406	0.32	-1.2
3,575,651	+		Psest_3406	0.32	-1.6
3,575,651	+		Psest_3406	0.32	+0.0
3,575,682	+		Psest_3406	0.35	-0.9
3,575,985	+		Psest_3406	0.57	+0.7
3,575,986	-		Psest_3406	0.57	-0.8
3,576,031	+		Psest_3406	0.61	+0.6
3,576,031	+		Psest_3406	0.61	-2.5
3,576,031	+		Psest_3406	0.61	-2.1
3,576,032	-		Psest_3406	0.61	+0.5
3,576,035	+		Psest_3406	0.61	+0.6
3,576,035	+		Psest_3406	0.61	-0.2
3,576,036	-		Psest_3406	0.61	-0.1
3,576,036	-		Psest_3406	0.61	+1.2
3,576,039	+		Psest_3406	0.61	+0.0
3,576,040	-		Psest_3406	0.62	+0.3
3,576,040	-		Psest_3406	0.62	-1.3
3,576,040	-		Psest_3406	0.62	-0.5
3,576,102	+		Psest_3406	0.66	+0.8
3,576,102	+		Psest_3406	0.66	-0.2
3,576,102	+		Psest_3406	0.66	-0.4
3,576,103	-		Psest_3406	0.66	-0.3
3,576,103	-		Psest_3406	0.66	-0.3
3,576,103	-		Psest_3406	0.66	-0.9
3,576,103	-		Psest_3406	0.66	-0.6
3,576,103	-		Psest_3406	0.66	-0.6
3,576,167	+		Psest_3406	0.71	+4.5
3,576,168	-		Psest_3406	0.71	-0.6
3,576,202	+		Psest_3406	0.74	-1.2
3,576,202	+		Psest_3406	0.74	+1.0
3,576,202	+		Psest_3406	0.74	-1.0
3,576,203	-		Psest_3406	0.74	-2.2
3,576,203	-		Psest_3406	0.74	+1.3
3,576,203	-		Psest_3406	0.74	+0.9
3,576,203	-		Psest_3406	0.74	-2.2
3,576,205	-		Psest_3406	0.74	+0.3
3,576,242	+		Psest_3406	0.77	+0.9
3,576,242	+		Psest_3406	0.77	-0.7
3,576,243	-		Psest_3406	0.77	-1.3
3,576,272	-		Psest_3406	0.79	-0.3
3,576,356	-		Psest_3406	0.85	+0.4
3,576,356	-		Psest_3406	0.85	-0.9
3,576,368	+		Psest_3406	0.86	-0.3
3,576,376	+		Psest_3406	0.87	+1.6
3,576,381	+		Psest_3406	0.87	-0.3
3,576,402	+		Psest_3406	0.89	+1.3
3,576,402	+		Psest_3406	0.89	+0.3
3,576,402	+		Psest_3406	0.89	-0.4
3,576,403	-		Psest_3406	0.89	-0.3
3,576,531	+				-0.3
3,576,531	+				+1.8
3,576,531	+				-1.4
3,576,532	-				+0.6
3,576,548	+				-2.8
3,576,658	+				+0.2
3,576,658	+				-0.6
3,576,658	+				-0.5
3,576,658	+				+0.2
3,576,658	+				-1.1
3,576,658	+				-0.2
3,576,658	+				-0.3
3,576,658	+				+0.1
3,576,658	+				-0.1
3,576,658	+				-0.4
3,576,659	-				+0.5
3,576,659	-				+0.6
3,576,659	-				-2.2
3,576,671	+				+1.3
3,576,672	-				-0.4
3,576,672	-				-1.4
3,576,679	+				+0.3
3,576,931	+		Psest_3407	0.12	+0.2
3,576,931	+		Psest_3407	0.12	+0.2
3,576,931	+		Psest_3407	0.12	+1.1
3,576,932	-		Psest_3407	0.12	-0.2
3,576,973	+		Psest_3407	0.13	+0.2
3,576,973	+		Psest_3407	0.13	+1.6
3,576,973	+		Psest_3407	0.13	-0.4
3,576,973	+		Psest_3407	0.13	-1.0
3,576,973	+		Psest_3407	0.13	-0.9
3,576,973	+		Psest_3407	0.13	+0.0
3,576,973	+		Psest_3407	0.13	+0.5
3,576,974	-		Psest_3407	0.13	+0.7
3,576,974	-		Psest_3407	0.13	+0.5
3,576,974	-		Psest_3407	0.13	-0.4
3,576,974	-		Psest_3407	0.13	+1.0
3,576,974	-		Psest_3407	0.13	+0.6
3,576,974	-		Psest_3407	0.13	-2.4
3,576,974	-		Psest_3407	0.13	-1.1
3,576,974	-		Psest_3407	0.13	-1.4
3,576,974	-		Psest_3407	0.13	-0.9
3,576,974	-		Psest_3407	0.13	+0.0
3,576,974	-		Psest_3407	0.13	-0.1
3,576,974	-		Psest_3407	0.13	-1.0
3,576,974	-		Psest_3407	0.13	-0.2
3,576,974	-		Psest_3407	0.13	-0.4
3,576,974	-		Psest_3407	0.13	-0.7
3,577,140	+		Psest_3407	0.18	+0.2
3,577,291	+		Psest_3407	0.23	-1.1
3,577,291	+		Psest_3407	0.23	-1.4
3,577,291	+		Psest_3407	0.23	-1.6
3,577,663	+		Psest_3407	0.35	-1.1
3,577,663	+		Psest_3407	0.35	-1.6
3,577,663	+		Psest_3407	0.35	-0.1
3,577,663	+		Psest_3407	0.35	-0.9
3,577,664	-		Psest_3407	0.35	+0.5
3,577,664	-		Psest_3407	0.35	-0.3
3,577,664	-		Psest_3407	0.35	-2.1
3,577,664	-		Psest_3407	0.35	-2.2
3,577,664	-		Psest_3407	0.35	-0.1
3,577,664	-		Psest_3407	0.35	-0.4
3,577,664	-		Psest_3407	0.35	+0.2
3,577,822	+		Psest_3407	0.40	-0.6
3,577,913	+		Psest_3407	0.43	+1.6
3,577,913	+		Psest_3407	0.43	+1.8
3,577,913	+		Psest_3407	0.43	+0.0
3,577,913	+		Psest_3407	0.43	+3.9
3,578,008	+		Psest_3407	0.46	+1.5
3,578,008	+		Psest_3407	0.46	+0.0
3,578,008	+		Psest_3407	0.46	-0.6
3,578,008	+		Psest_3407	0.46	+0.1
3,578,009	-		Psest_3407	0.46	-2.2
3,578,009	-		Psest_3407	0.46	-0.7
3,578,009	-		Psest_3407	0.46	-2.0
3,578,009	-		Psest_3407	0.46	+0.2
3,578,009	-		Psest_3407	0.46	-1.0
3,578,009	-		Psest_3407	0.46	+0.6
3,578,011	+		Psest_3407	0.46	+0.8
3,578,011	+		Psest_3407	0.46	+0.0
3,578,011	+		Psest_3407	0.46	-0.4
3,578,012	-		Psest_3407	0.46	+1.3
3,578,012	-		Psest_3407	0.46	+0.1
3,578,097	+		Psest_3407	0.48	-2.4
3,578,098	-		Psest_3407	0.48	+1.6
3,578,119	+		Psest_3407	0.49	+2.8
3,578,120	-		Psest_3407	0.49	-0.5
3,578,120	-		Psest_3407	0.49	-0.6
3,578,120	-		Psest_3407	0.49	+0.7
3,578,120	-		Psest_3407	0.49	-0.8
3,578,120	-		Psest_3407	0.49	-2.1
3,578,120	-		Psest_3407	0.49	-1.1
3,578,174	-		Psest_3407	0.51	-2.0
3,578,174	-		Psest_3407	0.51	+0.2
3,578,174	-		Psest_3407	0.51	-2.7
3,578,174	-		Psest_3407	0.51	+0.3
3,578,174	-		Psest_3407	0.51	+0.2
3,578,174	-		Psest_3407	0.51	+1.0
3,578,174	-		Psest_3407	0.51	+2.6
3,578,174	-		Psest_3407	0.51	-0.2
3,578,174	-		Psest_3407	0.51	-0.0
3,578,174	-		Psest_3407	0.51	+0.3
3,578,174	-		Psest_3407	0.51	+2.4
3,578,174	-		Psest_3407	0.51	-1.3
3,578,183	-		Psest_3407	0.51	+2.7
3,578,183	-		Psest_3407	0.51	-2.3
3,578,183	-		Psest_3407	0.51	-1.4
3,578,183	-		Psest_3407	0.51	-2.3
3,578,183	-		Psest_3407	0.51	-0.5
3,578,183	-		Psest_3407	0.51	-0.6
3,578,183	-		Psest_3407	0.51	-0.5
3,578,284	+		Psest_3407	0.54	-2.4
3,578,284	+		Psest_3407	0.54	-0.2
3,578,284	+		Psest_3407	0.54	-0.9
3,578,284	+		Psest_3407	0.54	-0.0
3,578,285	-		Psest_3407	0.54	+0.0
3,578,285	-		Psest_3407	0.54	-0.8
3,578,425	+		Psest_3407	0.59	+0.7
3,578,425	+		Psest_3407	0.59	-2.9
3,578,425	+		Psest_3407	0.59	+0.2
3,578,425	+		Psest_3407	0.59	-0.5
3,578,425	+		Psest_3407	0.59	-1.6
3,578,426	-		Psest_3407	0.59	-2.0
3,578,426	-		Psest_3407	0.59	+2.6
3,578,426	-		Psest_3407	0.59	+1.9
3,578,426	-		Psest_3407	0.59	+1.7
3,578,426	-		Psest_3407	0.59	+0.9
3,578,426	-		Psest_3407	0.59	-0.7
3,578,426	-		Psest_3407	0.59	+0.6
3,578,426	-		Psest_3407	0.59	+1.0
3,578,426	-		Psest_3407	0.59	+0.4
3,578,426	-		Psest_3407	0.59	-0.5
3,578,653	+		Psest_3407	0.66	+1.8
3,578,653	+		Psest_3407	0.66	-2.4
3,578,653	+		Psest_3407	0.66	-0.9
3,578,653	+		Psest_3407	0.66	-1.0
3,578,653	+		Psest_3407	0.66	-1.4
3,578,653	+		Psest_3407	0.66	+3.3
3,578,653	+		Psest_3407	0.66	-0.4
3,578,653	+		Psest_3407	0.66	+2.2
3,578,653	+		Psest_3407	0.66	+0.1
3,578,653	+		Psest_3407	0.66	+0.2
3,578,653	+		Psest_3407	0.66	+0.3
3,578,653	+		Psest_3407	0.66	+1.4
3,578,687	+		Psest_3407	0.67	-0.8
3,578,688	-		Psest_3407	0.67	+0.3
3,578,791	+		Psest_3407	0.70	+1.0
3,578,791	+		Psest_3407	0.70	-0.8
3,578,791	+		Psest_3407	0.70	-0.3
3,578,792	-		Psest_3407	0.70	+1.6
3,578,792	-		Psest_3407	0.70	-0.4
3,578,792	-		Psest_3407	0.70	+0.5
3,578,794	+		Psest_3407	0.70	-0.6
3,578,794	+		Psest_3407	0.70	-0.4
3,578,794	+		Psest_3407	0.70	+0.4
3,578,794	+		Psest_3407	0.70	-2.4
3,578,794	+		Psest_3407	0.70	-0.2
3,578,794	+		Psest_3407	0.70	+0.5
3,578,794	+		Psest_3407	0.70	+2.5
3,578,794	+		Psest_3407	0.70	-2.5
3,578,794	+		Psest_3407	0.70	-0.1
3,578,794	+		Psest_3407	0.70	-2.1
3,578,794	+		Psest_3407	0.70	-1.9
3,578,794	+		Psest_3407	0.70	-0.2
3,578,795	-		Psest_3407	0.70	-0.7
3,578,795	-		Psest_3407	0.70	+0.2
3,578,795	-		Psest_3407	0.70	+1.2
3,578,795	-		Psest_3407	0.70	+0.1
3,578,795	-		Psest_3407	0.70	-1.4
3,578,795	-		Psest_3407	0.70	-0.6
3,578,795	-		Psest_3407	0.70	+2.5
3,578,795	-		Psest_3407	0.70	-0.4
3,578,795	-		Psest_3407	0.70	+0.6
3,578,795	-		Psest_3407	0.70	-0.1
3,578,795	-		Psest_3407	0.70	+1.9
3,578,795	-		Psest_3407	0.70	+0.6
3,578,795	-		Psest_3407	0.70	+0.3
3,578,795	-		Psest_3407	0.70	-0.1
3,578,795	-		Psest_3407	0.70	-0.1
3,578,799	+		Psest_3407	0.70	-0.4
3,578,799	+		Psest_3407	0.70	-1.0
3,578,799	+		Psest_3407	0.70	+0.3
3,578,800	-		Psest_3407	0.70	-2.1
3,578,800	-		Psest_3407	0.70	-1.7
3,578,800	-		Psest_3407	0.70	+0.0
3,578,839	+		Psest_3407	0.71	-0.6
3,578,839	+		Psest_3407	0.71	-1.2
3,578,839	+		Psest_3407	0.71	-3.3
3,578,839	+		Psest_3407	0.71	+0.9
3,578,839	+		Psest_3407	0.71	+1.7
3,578,839	+		Psest_3407	0.71	+1.4
3,578,839	+		Psest_3407	0.71	-1.4
3,578,839	+		Psest_3407	0.71	-0.7
3,578,839	+		Psest_3407	0.71	+1.6
3,578,839	+		Psest_3407	0.71	+0.6
3,578,839	+		Psest_3407	0.71	+0.7
3,578,840	-		Psest_3407	0.71	-0.4
3,578,840	-		Psest_3407	0.71	+1.6
3,578,840	-		Psest_3407	0.71	-1.3
3,578,840	-		Psest_3407	0.71	-1.2
3,578,840	-		Psest_3407	0.71	-1.6
3,578,840	-		Psest_3407	0.71	+0.4
3,578,840	-		Psest_3407	0.71	-0.2
3,578,840	-		Psest_3407	0.71	+0.2
3,578,840	-		Psest_3407	0.71	+0.0
3,578,840	-		Psest_3407	0.71	+0.6
3,578,871	+		Psest_3407	0.72	+0.6
3,578,872	-		Psest_3407	0.72	-2.2
3,578,872	-		Psest_3407	0.72	+1.2
3,578,872	-		Psest_3407	0.72	-1.2
3,578,876	-		Psest_3407	0.73	+0.1
3,578,876	-		Psest_3407	0.73	+1.0
3,578,876	-		Psest_3407	0.73	-0.4
3,578,876	-		Psest_3407	0.73	+0.9
3,578,876	-		Psest_3407	0.73	-0.7
3,578,876	-		Psest_3407	0.73	+0.9
3,578,876	-		Psest_3407	0.73	-1.6
3,578,876	-		Psest_3407	0.73	-0.0
3,578,876	-		Psest_3407	0.73	+0.3
3,578,876	-		Psest_3407	0.73	+0.4
3,578,876	-		Psest_3407	0.73	+0.2
3,578,947	+		Psest_3407	0.75	-1.1
3,578,947	+		Psest_3407	0.75	-0.2
3,578,947	+		Psest_3407	0.75	+1.3
3,578,947	+		Psest_3407	0.75	-0.1
3,578,948	-		Psest_3407	0.75	-2.0
3,578,948	-		Psest_3407	0.75	+0.1
3,578,950	+		Psest_3407	0.75	-0.3
3,578,951	-		Psest_3407	0.75	+0.9
3,578,951	-		Psest_3407	0.75	-0.8
3,578,951	-		Psest_3407	0.75	+0.5
3,579,185	-		Psest_3407	0.82	+0.6
3,579,185	-		Psest_3407	0.82	+1.4
3,579,185	-		Psest_3407	0.82	-1.0
3,579,217	+		Psest_3407	0.83	+2.2
3,579,260	+		Psest_3407	0.85	-0.6
3,579,261	-		Psest_3407	0.85	-0.8
3,579,273	-		Psest_3407	0.85	+1.6
3,579,273	-		Psest_3407	0.85	-1.0
3,579,273	-		Psest_3407	0.85	-0.2
3,579,287	+		Psest_3407	0.85	+0.4
3,579,288	-		Psest_3407	0.85	+1.3
3,579,332	+		Psest_3407	0.87	+1.5
3,579,332	+		Psest_3407	0.87	-0.7
3,579,332	+		Psest_3407	0.87	-0.7
3,579,332	+		Psest_3407	0.87	-1.4
3,579,332	+		Psest_3407	0.87	-0.9
3,579,333	-		Psest_3407	0.87	+0.6
3,579,333	-		Psest_3407	0.87	-1.3
3,579,333	-		Psest_3407	0.87	-1.7
3,579,359	-		Psest_3407	0.88	+0.3
3,579,450	+				-0.1
3,579,533	+				+1.0
3,579,533	+				-2.9
3,579,533	+				-0.3
3,579,533	+				+0.0
3,579,533	+				-0.7
3,579,533	+				-0.4
3,579,533	+				+0.2
3,579,534	-				-1.9
3,579,534	-				+1.9
3,579,534	-				+1.0
3,579,534	-				+0.5
3,579,534	-				+0.7
3,579,534	-				-0.7
3,579,534	-				+0.3
3,579,534	-				-1.0
3,579,534	-				-1.0
3,579,534	-				+1.3
3,579,639	-				-1.0
3,579,690	-				+0.6
3,579,690	-				+2.0
3,579,732	+				-2.7
3,579,733	-				+1.1
3,579,773	+				-0.0
3,579,773	+				+0.6
3,579,773	+				-1.0
3,579,773	+				+0.9
3,579,773	+				-1.9
3,579,786	+				+1.4
3,579,900	+		Psest_3408	0.52	-1.1
3,579,900	+		Psest_3408	0.52	+2.9
3,579,900	+		Psest_3408	0.52	-0.6
3,579,900	+		Psest_3408	0.52	+1.3
3,579,900	+		Psest_3408	0.52	-0.1
3,579,900	+		Psest_3408	0.52	+0.3
3,579,900	+		Psest_3408	0.52	-0.4
3,579,900	+		Psest_3408	0.52	+0.7
3,579,900	+		Psest_3408	0.52	+0.8
3,579,901	-		Psest_3408	0.52	-0.5
3,579,901	-		Psest_3408	0.52	-1.4
3,580,000	+				-0.9
3,580,001	-				+0.2
3,580,001	-				-1.0
3,580,001	-				-3.2
3,580,036	+				+1.6
3,580,037	-				+0.9
3,580,147	+				-1.4
3,580,147	+				+1.0
3,580,148	-				-0.2
3,580,207	+		Psest_3409	0.16	-0.4
3,580,261	+		Psest_3409	0.26	-0.4
3,580,336	+		Psest_3409	0.38	+1.6
3,580,337	-		Psest_3409	0.38	-0.7
3,580,337	-		Psest_3409	0.38	-0.8
3,580,556	-		Psest_3409	0.76	-2.7
3,580,575	+		Psest_3409	0.79	-0.1
3,580,575	+		Psest_3409	0.79	+1.2
3,580,575	+		Psest_3409	0.79	-2.0
3,580,576	-		Psest_3409	0.79	-0.8
3,580,576	-		Psest_3409	0.79	-0.4
3,580,668	+				+0.3
3,580,730	+				-0.1
3,580,731	-				+0.3
3,580,731	-				-2.4
3,580,736	+				-1.0
3,580,736	+				+0.9