Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1481

Experiment: Lactate-nitrate; anaerobic; nickel stress sample1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Lactate-nitrate; anaerobic; nickel stress sample1
1,583,667	-		Psest_1479	0.28	+1.6
1,583,667	-		Psest_1479	0.28	+2.1
1,583,669	-		Psest_1479	0.29	-0.3
1,583,833	+		Psest_1479	0.56	-0.3
1,583,833	+		Psest_1479	0.56	-4.3
1,583,833	+		Psest_1479	0.56	+0.2
1,583,834	-		Psest_1479	0.56	+0.1
1,583,834	-		Psest_1479	0.56	-1.4
1,583,834	-		Psest_1479	0.56	+0.4
1,583,921	-		Psest_1479	0.70	-0.4
1,584,070	+				+0.6
1,584,071	-				+0.5
1,584,073	+				+0.0
1,584,073	+				+1.0
1,584,073	+				-0.8
1,584,073	+				-0.7
1,584,074	-				-0.1
1,584,074	-				-0.4
1,584,074	-				-0.9
1,584,074	-				-0.1
1,584,074	-				-0.7
1,584,088	+				-0.5
1,584,088	+				+2.8
1,584,089	-				-0.5
1,584,089	-				+0.1
1,584,089	-				-1.6
1,584,089	-				+0.4
1,584,089	-				-0.3
1,584,089	-				+0.2
1,584,256	-		Psest_1480	0.41	-0.1
1,584,256	-		Psest_1480	0.41	-0.1
1,584,439	+		Psest_1480	0.88	-0.4
1,584,440	-		Psest_1480	0.88	-0.4
1,584,455	+				-2.1
1,584,455	+				-1.5
1,584,456	-				+0.4
1,584,456	-				+0.0
1,584,456	-				-0.1
1,584,456	-				+0.0
1,584,456	-				+0.8
1,584,456	-				-0.7
1,584,456	-				+0.8
1,584,487	+				-2.9
1,584,556	+				+0.6
1,584,556	+				+0.4
1,584,556	+				-0.6
1,584,556	+				-2.8
1,584,556	+				-1.2
1,584,557	-				+0.7
1,584,557	-				+3.0
1,584,557	-				+0.2
1,584,565	-				+0.7
1,584,707	+				-1.2
1,584,806	+		Psest_1481	0.16	-1.9
1,584,807	-		Psest_1481	0.16	-0.0
1,584,807	-		Psest_1481	0.16	-0.8
1,584,807	-		Psest_1481	0.16	+0.3
1,584,807	-		Psest_1481	0.16	-0.8
1,584,807	-		Psest_1481	0.16	-0.3
1,584,807	-		Psest_1481	0.16	+1.1
1,584,808	+		Psest_1481	0.16	-0.1
1,584,809	-		Psest_1481	0.16	+0.1
1,584,854	+		Psest_1481	0.20	-0.9
1,584,854	+		Psest_1481	0.20	+0.4
1,584,854	+		Psest_1481	0.20	+0.1
1,584,855	-		Psest_1481	0.20	-0.2
1,584,964	+		Psest_1481	0.29	-0.9
1,584,964	+		Psest_1481	0.29	+0.6
1,584,965	-		Psest_1481	0.29	-1.2
1,584,965	-		Psest_1481	0.29	+1.3
1,585,013	+		Psest_1481	0.33	+0.0
1,585,013	+		Psest_1481	0.33	-0.4
1,585,014	-		Psest_1481	0.33	+0.1
1,585,014	-		Psest_1481	0.33	-2.8
1,585,073	+		Psest_1481	0.37	+0.8
1,585,073	+		Psest_1481	0.37	+0.2
1,585,073	+		Psest_1481	0.37	+0.7
1,585,073	+		Psest_1481	0.37	-1.4
1,585,073	+		Psest_1481	0.37	+0.4
1,585,073	+		Psest_1481	0.37	+0.2
1,585,073	+		Psest_1481	0.37	+2.1
1,585,073	+		Psest_1481	0.37	-0.4
1,585,073	+		Psest_1481	0.37	-0.6
1,585,073	+		Psest_1481	0.37	-0.6
1,585,073	+		Psest_1481	0.37	-0.6
1,585,074	-		Psest_1481	0.38	-2.8
1,585,074	-		Psest_1481	0.38	-2.7
1,585,074	-		Psest_1481	0.38	+0.6
1,585,074	-		Psest_1481	0.38	-0.5
1,585,074	-		Psest_1481	0.38	-0.5
1,585,074	-		Psest_1481	0.38	-0.0
1,585,074	-		Psest_1481	0.38	+0.1
1,585,181	+		Psest_1481	0.46	+0.6
1,585,181	+		Psest_1481	0.46	+0.0
1,585,181	+		Psest_1481	0.46	-0.5
1,585,181	+		Psest_1481	0.46	+0.3
1,585,181	+		Psest_1481	0.46	-0.8
1,585,181	+		Psest_1481	0.46	+0.1
1,585,181	+		Psest_1481	0.46	-0.6
1,585,181	+		Psest_1481	0.46	+0.1
1,585,181	+		Psest_1481	0.46	-0.1
1,585,182	-		Psest_1481	0.46	-1.5
1,585,182	-		Psest_1481	0.46	+1.2
1,585,182	-		Psest_1481	0.46	+0.2
1,585,283	+		Psest_1481	0.55	-1.7
1,585,283	+		Psest_1481	0.55	-0.8
1,585,283	+		Psest_1481	0.55	+1.2
1,585,283	+		Psest_1481	0.55	-0.1
1,585,283	+		Psest_1481	0.55	+1.3
1,585,283	+		Psest_1481	0.55	+1.4
1,585,283	+		Psest_1481	0.55	-0.9
1,585,284	-		Psest_1481	0.55	+2.4
1,585,284	-		Psest_1481	0.55	+0.1
1,585,284	-		Psest_1481	0.55	+3.4
1,585,284	-		Psest_1481	0.55	+0.6
1,585,284	-		Psest_1481	0.55	+2.6
1,585,293	-		Psest_1481	0.55	+0.6
1,585,316	+		Psest_1481	0.57	+3.6
1,585,358	+		Psest_1481	0.61	+1.1
1,585,358	+		Psest_1481	0.61	+1.9
1,585,358	+		Psest_1481	0.61	+0.3
1,585,358	+		Psest_1481	0.61	+0.6
1,585,358	+		Psest_1481	0.61	+0.6
1,585,359	-		Psest_1481	0.61	+1.1
1,585,407	+		Psest_1481	0.65	-1.1
1,585,429	+		Psest_1481	0.66	-0.4
1,585,539	+		Psest_1481	0.75	-0.1
1,585,569	+		Psest_1481	0.78	+0.6
1,585,569	+		Psest_1481	0.78	-0.1
1,585,569	+		Psest_1481	0.78	+0.4
1,585,569	+		Psest_1481	0.78	+1.2
1,585,569	+		Psest_1481	0.78	-0.3
1,585,569	+		Psest_1481	0.78	+1.2
1,585,570	-		Psest_1481	0.78	+0.1
1,585,570	-		Psest_1481	0.78	-0.4
1,585,649	+		Psest_1481	0.84	-0.4
1,585,649	+		Psest_1481	0.84	+0.9
1,585,956	+				-0.9
1,585,956	+				-0.0
1,585,957	-				-0.6
1,585,957	-				-0.7
1,585,957	-				-0.0
1,585,957	-				+0.8
1,586,008	+		Psest_1482	0.13	-0.3
1,586,008	+		Psest_1482	0.13	-1.2
1,586,008	+		Psest_1482	0.13	+0.7
1,586,008	+		Psest_1482	0.13	+0.5
1,586,008	+		Psest_1482	0.13	-0.5
1,586,008	+		Psest_1482	0.13	+0.7
1,586,008	+		Psest_1482	0.13	+0.4
1,586,008	+		Psest_1482	0.13	-2.0
1,586,008	+		Psest_1482	0.13	+1.1
1,586,009	-		Psest_1482	0.13	+1.9
1,586,009	-		Psest_1482	0.13	-1.1
1,586,009	-		Psest_1482	0.13	-0.3
1,586,009	-		Psest_1482	0.13	-1.3
1,586,009	-		Psest_1482	0.13	-0.0
1,586,009	-		Psest_1482	0.13	+0.1
1,586,009	-		Psest_1482	0.13	-1.7
1,586,009	-		Psest_1482	0.13	-1.3
1,586,009	-		Psest_1482	0.13	-0.2
1,586,010	+		Psest_1482	0.14	-1.3
1,586,010	+		Psest_1482	0.14	+1.0
1,586,010	+		Psest_1482	0.14	+0.8
1,586,010	+		Psest_1482	0.14	-1.3
1,586,010	+		Psest_1482	0.14	+0.5
1,586,010	+		Psest_1482	0.14	-1.4
1,586,010	+		Psest_1482	0.14	-0.8
1,586,010	+		Psest_1482	0.14	-1.2
1,586,010	+		Psest_1482	0.14	-0.3
1,586,010	+		Psest_1482	0.14	-0.1
1,586,010	+		Psest_1482	0.14	+0.7
1,586,011	-		Psest_1482	0.14	-0.4
1,586,011	-		Psest_1482	0.14	+0.0
1,586,012	+		Psest_1482	0.15	-0.3
1,586,012	+		Psest_1482	0.15	-2.9
1,586,012	+		Psest_1482	0.15	-0.3
1,586,012	+		Psest_1482	0.15	-0.9
1,586,012	+		Psest_1482	0.15	-0.7
1,586,012	+		Psest_1482	0.15	-0.8
1,586,012	+		Psest_1482	0.15	+2.2
1,586,012	+		Psest_1482	0.15	-0.0
1,586,012	+		Psest_1482	0.15	-0.2
1,586,012	+		Psest_1482	0.15	-1.2
1,586,012	+		Psest_1482	0.15	+1.3
1,586,012	+		Psest_1482	0.15	-0.8
1,586,012	+		Psest_1482	0.15	-1.2
1,586,012	+		Psest_1482	0.15	-0.1
1,586,012	+		Psest_1482	0.15	+0.8
1,586,012	+		Psest_1482	0.15	-1.7
1,586,012	+		Psest_1482	0.15	-0.3
1,586,012	+		Psest_1482	0.15	-0.5
1,586,012	+		Psest_1482	0.15	+0.6
1,586,013	-		Psest_1482	0.15	+0.1
1,586,013	-		Psest_1482	0.15	-0.9
1,586,013	-		Psest_1482	0.15	-1.9
1,586,153	+		Psest_1482	0.86	-0.9
1,586,192	+				+0.7
1,586,285	+		Psest_1483	0.26	+0.1
1,586,285	+		Psest_1483	0.26	-1.4
1,586,286	-		Psest_1483	0.26	-0.5
1,586,286	-		Psest_1483	0.26	-0.7
1,586,337	-		Psest_1483	0.39	-0.9
1,586,342	+		Psest_1483	0.40	+0.3
1,586,342	+		Psest_1483	0.40	-0.5
1,586,342	+		Psest_1483	0.40	+0.6
1,586,342	+		Psest_1483	0.40	-0.9
1,586,410	-		Psest_1483	0.58	+0.2
1,586,496	+		Psest_1483	0.80	+1.2
1,586,496	+		Psest_1483	0.80	-0.4
1,586,496	+		Psest_1483	0.80	-0.4
1,586,497	-		Psest_1483	0.80	-0.7
1,586,611	+				+0.2
1,586,612	-				+0.2
1,586,613	+				+0.1
1,586,613	+				-0.7
1,586,613	+				-1.3
1,586,613	+				+0.4
1,586,613	+				-0.6
1,586,613	+				-1.9
1,586,614	-				+2.6
1,586,614	-				-3.3
1,586,614	-				+2.0
1,586,614	-				-0.7
1,586,798	+				-1.9
1,586,798	+				-0.9
1,586,798	+				+0.1
1,586,799	-				+0.4