Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1957

Experiment: Lactate-nitrate; anaerobic; cobalt stress sample2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Lactate-nitrate; anaerobic; cobalt stress sample2
2,072,685	+		Psest_1955	0.28	+0.3
2,072,685	+		Psest_1955	0.28	+0.1
2,072,695	+		Psest_1955	0.31	-0.5
2,072,696	-		Psest_1955	0.31	+1.6
2,072,696	-		Psest_1955	0.31	-0.9
2,072,696	-		Psest_1955	0.31	-2.3
2,072,696	-		Psest_1955	0.31	-0.7
2,072,696	-		Psest_1955	0.31	-1.6
2,072,696	-		Psest_1955	0.31	-1.3
2,072,696	-		Psest_1955	0.31	-1.1
2,072,872	-		Psest_1955	0.77	+0.6
2,072,872	-		Psest_1955	0.77	-2.0
2,072,872	-		Psest_1955	0.77	+0.3
2,072,872	-		Psest_1955	0.77	+1.9
2,072,872	-		Psest_1955	0.77	-0.1
2,072,961	+				-0.0
2,072,962	-				+1.4
2,073,043	+		Psest_1956	0.18	-0.9
2,073,044	-		Psest_1956	0.18	-0.1
2,073,044	-		Psest_1956	0.18	-0.6
2,073,051	+		Psest_1956	0.20	+0.9
2,073,051	+		Psest_1956	0.20	+0.4
2,073,051	+		Psest_1956	0.20	-1.0
2,073,051	+		Psest_1956	0.20	-0.9
2,073,051	+		Psest_1956	0.20	+0.9
2,073,052	-		Psest_1956	0.20	-1.3
2,073,052	-		Psest_1956	0.20	-0.0
2,073,094	+		Psest_1956	0.30	-1.8
2,073,094	+		Psest_1956	0.30	-0.1
2,073,095	-		Psest_1956	0.31	-1.5
2,073,095	-		Psest_1956	0.31	+0.6
2,073,199	+		Psest_1956	0.56	-0.5
2,073,199	+		Psest_1956	0.56	+1.5
2,073,199	+		Psest_1956	0.56	+1.0
2,073,199	+		Psest_1956	0.56	-0.4
2,073,199	+		Psest_1956	0.56	-0.2
2,073,199	+		Psest_1956	0.56	-2.2
2,073,199	+		Psest_1956	0.56	+1.0
2,073,200	-		Psest_1956	0.57	+0.6
2,073,200	-		Psest_1956	0.57	-0.8
2,073,200	-		Psest_1956	0.57	-0.0
2,073,200	-		Psest_1956	0.57	+1.1
2,073,200	-		Psest_1956	0.57	+0.5
2,073,200	-		Psest_1956	0.57	-0.7
2,073,200	-		Psest_1956	0.57	-2.2
2,073,200	-		Psest_1956	0.57	-1.2
2,073,200	-		Psest_1956	0.57	-0.8
2,073,200	-		Psest_1956	0.57	+0.6
2,073,200	-		Psest_1956	0.57	-0.9
2,073,200	-		Psest_1956	0.57	-0.5
2,073,200	-		Psest_1956	0.57	+0.9
2,073,200	-		Psest_1956	0.57	+0.3
2,073,203	+		Psest_1956	0.57	+0.1
2,073,289	+		Psest_1956	0.79	+2.6
2,073,289	+		Psest_1956	0.79	-0.1
2,073,495	-				+0.5
2,073,502	+				-0.8
2,073,503	-				-1.3
2,073,503	-				-0.7
2,073,575	+				+0.5
2,073,579	-				+0.9
2,073,579	-				-0.4
2,073,581	+				-1.2
2,073,581	+				-0.9
2,073,581	+				-1.6
2,073,581	+				-1.2
2,073,582	-				+0.1
2,073,582	-				-1.1
2,073,588	+				-0.4
2,073,599	-				-0.4
2,073,601	+				-0.5
2,073,601	+				-1.1
2,073,601	+				-0.5
2,073,601	+				+1.3
2,073,602	-				-2.7
2,073,602	-				+1.6
2,073,602	-				-2.6
2,073,602	-				-0.2
2,073,602	-				-1.5
2,073,602	-				+0.1
2,073,602	-				-2.0
2,073,602	-				-0.1
2,073,602	-				-0.5
2,073,662	+				+1.0
2,073,663	-				-0.3
2,073,690	-				+0.2
2,073,803	-		Psest_1957	0.16	-0.4
2,073,910	+		Psest_1957	0.24	-1.1
2,073,911	-		Psest_1957	0.24	+0.1
2,073,911	-		Psest_1957	0.24	-1.6
2,073,911	-		Psest_1957	0.24	-0.4
2,073,947	-		Psest_1957	0.27	+2.3
2,074,012	+		Psest_1957	0.32	-3.4
2,074,023	-		Psest_1957	0.33	-1.0
2,074,138	+		Psest_1957	0.42	+0.3
2,074,138	+		Psest_1957	0.42	-1.4
2,074,138	+		Psest_1957	0.42	-0.6
2,074,138	+		Psest_1957	0.42	+0.4
2,074,138	+		Psest_1957	0.42	-1.0
2,074,139	-		Psest_1957	0.42	-1.3
2,074,139	-		Psest_1957	0.42	-1.5
2,074,139	-		Psest_1957	0.42	-1.2
2,074,139	-		Psest_1957	0.42	-0.8
2,074,139	-		Psest_1957	0.42	-2.7
2,074,139	-		Psest_1957	0.42	-1.7
2,074,139	-		Psest_1957	0.42	-1.8
2,074,152	-		Psest_1957	0.43	-2.3
2,074,152	-		Psest_1957	0.43	-0.9
2,074,153	+		Psest_1957	0.43	+0.0
2,074,154	-		Psest_1957	0.43	-1.7
2,074,174	+		Psest_1957	0.45	-0.0
2,074,175	-		Psest_1957	0.45	-0.3
2,074,181	-		Psest_1957	0.45	+0.3
2,074,181	-		Psest_1957	0.45	-0.1
2,074,181	-		Psest_1957	0.45	+0.3
2,074,181	-		Psest_1957	0.45	-1.4
2,074,181	-		Psest_1957	0.45	+0.6
2,074,181	-		Psest_1957	0.45	-0.1
2,074,181	-		Psest_1957	0.45	-1.3
2,074,185	-		Psest_1957	0.46	-1.2
2,074,211	-		Psest_1957	0.48	-2.4
2,074,271	+		Psest_1957	0.53	+0.3
2,074,272	-		Psest_1957	0.53	-0.5
2,074,272	-		Psest_1957	0.53	-1.2
2,074,274	+		Psest_1957	0.53	+1.3
2,074,275	-		Psest_1957	0.53	+0.3
2,074,466	+		Psest_1957	0.68	-1.6
2,074,467	-		Psest_1957	0.68	-1.9
2,074,470	+		Psest_1957	0.68	-0.8
2,074,470	+		Psest_1957	0.68	+1.0
2,074,470	+		Psest_1957	0.68	-0.5
2,074,471	-		Psest_1957	0.68	-1.2
2,074,471	-		Psest_1957	0.68	+1.5
2,074,471	-		Psest_1957	0.68	+3.9
2,074,580	+		Psest_1957	0.77	+0.1
2,074,581	-		Psest_1957	0.77	-1.9
2,074,595	-		Psest_1957	0.78	-1.5
2,074,617	+		Psest_1957	0.80	-3.1
2,074,618	-		Psest_1957	0.80	-1.8
2,074,618	-		Psest_1957	0.80	-0.3
2,074,618	-		Psest_1957	0.80	-1.2
2,074,653	-		Psest_1957	0.82	-2.7
2,074,653	-		Psest_1957	0.82	+0.1
2,074,655	-		Psest_1957	0.83	+0.3
2,074,665	+		Psest_1957	0.83	-2.0
2,074,666	-		Psest_1957	0.83	-3.0
2,074,666	-		Psest_1957	0.83	-0.7
2,074,750	+				+2.4
2,074,750	+				+1.8
2,074,751	-				-0.6
2,074,758	-				-2.4
2,074,758	-				+0.2
2,074,882	+				-1.9
2,074,882	+				-0.7
2,074,882	+				-0.3
2,074,935	+				-1.3
2,074,963	+				+0.9
2,075,000	-				-0.1
2,075,040	+				+0.9
2,075,042	+				+0.8
2,075,042	+				+0.4
2,075,042	+				+0.6
2,075,042	+				+0.5
2,075,080	-				-0.6
2,075,080	-				-0.4
2,075,080	-				+0.5
2,075,162	+				-0.9
2,075,162	+				-0.8
2,075,163	-				+0.4
2,075,163	-				+0.4
2,075,163	-				-0.0
2,075,163	-				+0.1
2,075,254	+				-0.1
2,075,254	+				-0.7
2,075,254	+				+0.6
2,075,254	+				+1.1
2,075,255	-				+2.0
2,075,274	-				+0.5
2,075,274	-				+0.1
2,075,391	+		Psest_1958	0.41	-1.3
2,075,391	+		Psest_1958	0.41	-1.0
2,075,392	-		Psest_1958	0.42	+2.7
2,075,392	-		Psest_1958	0.42	-1.5
2,075,398	+		Psest_1958	0.44	+1.2
2,075,449	-		Psest_1958	0.65	-0.8
2,075,861	-				-2.5
2,075,861	-				+1.0