Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_4213

Experiment: Lactate-nitrate; anaerobic sample3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Lactate-nitrate; anaerobic sample3
4,387,603	+		Psest_4210	0.35	-1.1
4,387,973	+		Psest_4211	0.18	-0.2
4,388,015	+		Psest_4211	0.32	+0.2
4,388,015	+		Psest_4211	0.32	-0.9
4,388,015	+		Psest_4211	0.32	-1.2
4,388,016	-		Psest_4211	0.33	+0.4
4,388,016	-		Psest_4211	0.33	+0.9
4,388,016	-		Psest_4211	0.33	-1.9
4,388,016	-		Psest_4211	0.33	+1.4
4,388,016	-		Psest_4211	0.33	-0.4
4,388,214	-				+1.7
4,388,270	-				+0.6
4,388,270	-				-1.0
4,388,270	-				+0.7
4,388,270	-				+0.4
4,388,270	-				+0.4
4,388,270	-				+0.8
4,388,804	+		Psest_4213	0.12	+0.8
4,388,805	-		Psest_4213	0.12	-0.5
4,389,194	+		Psest_4213	0.32	+0.7
4,389,239	+		Psest_4213	0.34	-0.6
4,389,240	-		Psest_4213	0.34	-1.2
4,389,260	+		Psest_4213	0.35	-1.9
4,389,260	+		Psest_4213	0.35	+0.6
4,389,261	-		Psest_4213	0.35	-0.5
4,389,261	-		Psest_4213	0.35	+0.4
4,389,290	+		Psest_4213	0.37	+0.4
4,389,348	-		Psest_4213	0.39	+0.5
4,389,349	+		Psest_4213	0.40	+0.5
4,389,349	+		Psest_4213	0.40	+1.4
4,389,349	+		Psest_4213	0.40	-1.6
4,389,349	+		Psest_4213	0.40	-0.0
4,389,349	+		Psest_4213	0.40	-0.4
4,389,349	+		Psest_4213	0.40	-0.0
4,389,349	+		Psest_4213	0.40	+0.6
4,389,349	+		Psest_4213	0.40	+0.2
4,389,349	+		Psest_4213	0.40	-1.2
4,389,349	+		Psest_4213	0.40	+0.1
4,389,349	+		Psest_4213	0.40	-0.6
4,389,350	-		Psest_4213	0.40	-1.2
4,389,350	-		Psest_4213	0.40	-0.6
4,389,350	-		Psest_4213	0.40	-1.5
4,389,417	-		Psest_4213	0.43	+0.7
4,389,429	-				+0.4
4,389,483	+		Psest_4213	0.46	-1.0
4,389,483	+		Psest_4213	0.46	+2.4
4,389,484	-		Psest_4213	0.46	+0.2
4,389,484	-		Psest_4213	0.46	-0.4
4,389,484	-		Psest_4213	0.46	-1.5
4,389,585	+		Psest_4213	0.52	-1.1
4,389,585	+		Psest_4213	0.52	-0.5
4,389,585	+		Psest_4213	0.52	+0.3
4,389,585	+		Psest_4213	0.52	+0.8
4,389,585	+		Psest_4213	0.52	+3.3
4,389,585	+		Psest_4213	0.52	+1.8
4,389,585	+		Psest_4213	0.52	+0.4
4,389,585	+		Psest_4213	0.52	+1.8
4,389,585	+		Psest_4213	0.52	-0.2
4,389,586	-		Psest_4213	0.52	-0.6
4,389,586	-		Psest_4213	0.52	-0.3
4,389,586	-		Psest_4213	0.52	-0.1
4,389,586	-		Psest_4213	0.52	+1.5
4,389,586	-		Psest_4213	0.52	+1.4
4,389,586	-		Psest_4213	0.52	+0.7
4,389,586	-		Psest_4213	0.52	+0.5
4,389,586	-		Psest_4213	0.52	-0.3
4,389,586	-		Psest_4213	0.52	+1.0
4,389,586	-		Psest_4213	0.52	+1.9
4,389,586	-		Psest_4213	0.52	-0.8
4,389,586	-		Psest_4213	0.52	+1.9
4,389,586	-		Psest_4213	0.52	-2.2
4,389,586	-		Psest_4213	0.52	-0.3
4,389,586	-		Psest_4213	0.52	+0.6
4,389,586	-		Psest_4213	0.52	-0.6
4,389,586	-		Psest_4213	0.52	+1.0
4,389,586	-		Psest_4213	0.52	+1.5
4,389,586	-		Psest_4213	0.52	-1.0
4,389,586	-		Psest_4213	0.52	+0.1
4,389,620	+		Psest_4213	0.53	-1.1
4,389,668	+		Psest_4213	0.56	+0.8
4,389,668	+		Psest_4213	0.56	+0.4
4,389,668	+		Psest_4213	0.56	+0.8
4,389,669	-		Psest_4213	0.56	+1.3
4,389,669	-		Psest_4213	0.56	-1.9
4,389,669	-		Psest_4213	0.56	-1.9
4,389,678	+		Psest_4213	0.56	-0.9
4,389,679	-		Psest_4213	0.56	+1.8
4,389,679	-		Psest_4213	0.56	+0.5
4,389,679	-		Psest_4213	0.56	-0.2
4,389,714	+		Psest_4213	0.58	+0.7
4,389,715	-		Psest_4213	0.58	-2.9
4,389,715	-		Psest_4213	0.58	+0.1
4,389,715	-		Psest_4213	0.58	+0.4
4,389,715	-		Psest_4213	0.58	+2.1
4,389,715	-		Psest_4213	0.58	-1.1
4,389,770	+		Psest_4213	0.61	+1.4
4,389,770	+		Psest_4213	0.61	-1.4
4,389,770	+		Psest_4213	0.61	-1.0
4,389,771	-		Psest_4213	0.61	-1.9
4,389,771	-		Psest_4213	0.61	+1.1
4,389,783	-		Psest_4213	0.62	+0.0
4,389,785	+		Psest_4213	0.62	+2.0
4,389,786	-		Psest_4213	0.62	+0.9
4,389,786	-		Psest_4213	0.62	+0.0
4,389,786	-		Psest_4213	0.62	+0.1
4,389,786	-		Psest_4213	0.62	-0.0
4,389,786	-		Psest_4213	0.62	-1.0
4,389,786	-		Psest_4213	0.62	+2.3
4,389,786	-		Psest_4213	0.62	-0.8
4,389,786	-		Psest_4213	0.62	+0.1
4,389,786	-		Psest_4213	0.62	-1.6
4,389,786	-		Psest_4213	0.62	-2.1
4,389,786	-		Psest_4213	0.62	+0.0
4,389,786	-		Psest_4213	0.62	-1.2
4,389,786	-		Psest_4213	0.62	+1.1
4,389,786	-		Psest_4213	0.62	-0.1
4,389,786	-		Psest_4213	0.62	+0.8
4,390,107	+		Psest_4213	0.78	+1.3
4,390,108	-		Psest_4213	0.78	-0.3
4,390,108	-		Psest_4213	0.78	+0.0
4,390,125	+		Psest_4213	0.79	+0.2
4,390,126	-		Psest_4213	0.79	+0.4
4,390,161	+		Psest_4213	0.81	-0.9
4,390,161	+		Psest_4213	0.81	+0.4
4,390,162	-		Psest_4213	0.81	+4.1
4,390,194	-		Psest_4213	0.83	+0.4
4,390,272	-		Psest_4213	0.87	-0.7
4,390,501	+				-0.0
4,390,502	-				-1.2
4,390,537	+				+0.2
4,390,537	+				+2.2
4,390,537	+				-0.6
4,390,537	+				+0.1
4,390,538	-				-1.6
4,390,550	+				-1.8
4,390,593	+				+0.7
4,390,593	+				+1.4
4,390,594	-				-1.3
4,390,594	-				-2.5
4,390,594	-				-0.0
4,390,594	-				-0.4
4,390,594	-				+0.7
4,390,594	-				+1.1
4,390,594	-				-1.9
4,390,594	-				+1.2
4,390,666	+				-0.6
4,390,667	-				+2.0
4,390,741	+		Psest_4214	0.12	+0.4
4,390,742	-		Psest_4214	0.13	-0.5
4,390,742	-		Psest_4214	0.13	+1.4
4,390,743	+		Psest_4214	0.13	-2.2
4,390,744	-		Psest_4214	0.13	-0.6
4,390,744	-		Psest_4214	0.13	-0.0
4,390,744	-		Psest_4214	0.13	+0.8
4,390,794	+		Psest_4214	0.18	-0.2
4,390,794	+		Psest_4214	0.18	-1.9
4,390,794	+		Psest_4214	0.18	-0.1
4,390,794	+		Psest_4214	0.18	-1.6
4,390,795	-		Psest_4214	0.18	-1.1
4,390,795	-		Psest_4214	0.18	+1.8
4,390,795	-		Psest_4214	0.18	+1.0
4,390,795	-		Psest_4214	0.18	+1.8
4,390,821	+		Psest_4214	0.21	-1.6
4,390,821	+		Psest_4214	0.21	+0.5
4,390,822	-		Psest_4214	0.21	-1.2
4,390,822	-		Psest_4214	0.21	+0.2
4,390,822	-		Psest_4214	0.21	-0.7
4,390,923	+		Psest_4214	0.31	-1.5
4,390,923	+		Psest_4214	0.31	+2.3
4,390,923	+		Psest_4214	0.31	+0.7
4,390,923	+		Psest_4214	0.31	-1.3
4,390,923	+		Psest_4214	0.31	+0.2
4,390,923	+		Psest_4214	0.31	-0.5
4,390,924	-		Psest_4214	0.32	-0.9
4,390,924	-		Psest_4214	0.32	-1.2
4,390,924	-		Psest_4214	0.32	-0.3
4,390,924	-		Psest_4214	0.32	+0.7
4,390,979	-		Psest_4214	0.37	-0.0
4,390,979	-		Psest_4214	0.37	-1.8
4,390,980	+		Psest_4214	0.37	-0.2
4,390,980	+		Psest_4214	0.37	-0.4
4,390,980	+		Psest_4214	0.37	+0.9
4,390,980	+		Psest_4214	0.37	+0.4
4,390,980	+		Psest_4214	0.37	-0.3
4,390,980	+		Psest_4214	0.37	-0.8
4,390,980	+		Psest_4214	0.37	-0.2
4,390,980	+		Psest_4214	0.37	+0.6
4,390,980	+		Psest_4214	0.37	+0.7
4,390,980	+		Psest_4214	0.37	-0.6
4,390,980	+		Psest_4214	0.37	-0.8
4,390,981	-		Psest_4214	0.38	-1.6
4,390,981	-		Psest_4214	0.38	-0.3
4,390,981	-		Psest_4214	0.38	-0.2
4,390,981	-		Psest_4214	0.38	-0.3
4,390,981	-		Psest_4214	0.38	-0.3
4,390,981	-		Psest_4214	0.38	-0.1
4,390,981	-		Psest_4214	0.38	-0.0
4,390,981	-		Psest_4214	0.38	-0.9
4,390,981	-		Psest_4214	0.38	+2.2
4,390,981	-		Psest_4214	0.38	-2.1
4,390,981	-		Psest_4214	0.38	-0.5
4,390,981	-		Psest_4214	0.38	+0.4
4,390,981	-		Psest_4214	0.38	-2.4
4,391,026	+		Psest_4214	0.42	-0.5
4,391,037	-		Psest_4214	0.43	-0.9
4,391,084	+		Psest_4214	0.48	-1.2
4,391,085	-		Psest_4214	0.48	-0.8
4,391,132	+		Psest_4214	0.53	+1.5
4,391,137	+		Psest_4214	0.54	-0.3
4,391,162	+		Psest_4214	0.56	+0.4
4,391,162	+		Psest_4214	0.56	-0.4
4,391,162	+		Psest_4214	0.56	-1.2
4,391,162	+		Psest_4214	0.56	-1.5
4,391,162	+		Psest_4214	0.56	-1.6
4,391,162	+		Psest_4214	0.56	-0.6
4,391,162	+		Psest_4214	0.56	+0.6
4,391,163	-		Psest_4214	0.57	-0.3
4,391,163	-		Psest_4214	0.57	+0.1
4,391,163	-		Psest_4214	0.57	-1.1
4,391,163	-		Psest_4214	0.57	-1.2
4,391,165	-		Psest_4214	0.57	+1.0
4,391,208	+		Psest_4214	0.61	+2.1
4,391,273	-		Psest_4214	0.68	-1.2
4,391,288	+		Psest_4214	0.70	-1.2
4,391,288	+		Psest_4214	0.70	+0.1
4,391,288	+		Psest_4214	0.70	+0.8
4,391,288	+		Psest_4214	0.70	-2.4
4,391,306	-		Psest_4214	0.71	-0.1
4,391,320	+		Psest_4214	0.73	+0.6
4,391,320	+		Psest_4214	0.73	+0.4
4,391,321	-		Psest_4214	0.73	+0.4
4,391,329	+		Psest_4214	0.74	+0.1
4,391,329	+		Psest_4214	0.74	+0.4
4,391,329	+		Psest_4214	0.74	-1.2
4,391,330	-		Psest_4214	0.74	+1.9
4,391,363	-		Psest_4214	0.77	+1.2
4,391,402	+		Psest_4214	0.82	-1.8
4,391,402	+		Psest_4214	0.82	-1.3
4,391,435	+		Psest_4214	0.85	-0.6
4,391,446	-		Psest_4214	0.86	-0.7
4,391,446	-		Psest_4214	0.86	+0.4
4,391,446	-		Psest_4214	0.86	+2.0
4,391,446	-		Psest_4214	0.86	+0.0
4,391,446	-		Psest_4214	0.86	-0.8
4,391,456	-		Psest_4214	0.87	-0.4