Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2700

Experiment: Lactate-nitrate; anaerobic sample3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Lactate-nitrate; anaerobic sample3
2,888,704	+		Psest_2699	0.51	+0.8
2,888,782	+		Psest_2699	0.56	-2.1
2,888,782	+		Psest_2699	0.56	+0.7
2,888,782	+		Psest_2699	0.56	+0.1
2,888,782	+		Psest_2699	0.56	-1.1
2,888,783	-		Psest_2699	0.56	-0.8
2,888,783	-		Psest_2699	0.56	+1.0
2,888,783	-		Psest_2699	0.56	-0.1
2,888,783	-		Psest_2699	0.56	-0.5
2,889,059	+		Psest_2699	0.77	+0.0
2,889,059	+		Psest_2699	0.77	+0.9
2,889,061	+		Psest_2699	0.77	+0.4
2,889,061	+		Psest_2699	0.77	-0.7
2,889,061	+		Psest_2699	0.77	-0.1
2,889,061	+		Psest_2699	0.77	+1.0
2,889,061	+		Psest_2699	0.77	-0.7
2,889,061	+		Psest_2699	0.77	-2.4
2,889,061	+		Psest_2699	0.77	-0.6
2,889,061	+		Psest_2699	0.77	-0.0
2,889,061	+		Psest_2699	0.77	-3.3
2,889,061	+		Psest_2699	0.77	+0.3
2,889,062	-		Psest_2699	0.77	+1.5
2,889,062	-		Psest_2699	0.77	+0.0
2,889,062	-		Psest_2699	0.77	+0.6
2,889,062	-		Psest_2699	0.77	+1.4
2,889,062	-		Psest_2699	0.77	-1.4
2,889,062	-		Psest_2699	0.77	-0.3
2,889,085	+		Psest_2699	0.78	-0.9
2,889,193	+		Psest_2699	0.86	-0.5
2,889,193	+		Psest_2699	0.86	+0.9
2,889,193	+		Psest_2699	0.86	+0.1
2,889,193	+		Psest_2699	0.86	+0.8
2,889,193	+		Psest_2699	0.86	+0.4
2,889,193	+		Psest_2699	0.86	+0.2
2,889,193	+		Psest_2699	0.86	-1.1
2,889,194	-		Psest_2699	0.86	+0.0
2,889,194	-		Psest_2699	0.86	+0.5
2,889,194	-		Psest_2699	0.86	+0.9
2,889,197	-		Psest_2699	0.87	+0.6
2,889,197	-		Psest_2699	0.87	-0.5
2,889,197	-		Psest_2699	0.87	-1.0
2,889,197	-		Psest_2699	0.87	-0.5
2,889,197	-		Psest_2699	0.87	-0.9
2,889,235	+		Psest_2699	0.90	-0.1
2,889,235	+		Psest_2699	0.90	-0.6
2,889,235	+		Psest_2699	0.90	+0.1
2,889,235	+		Psest_2699	0.90	-0.6
2,889,236	-		Psest_2699	0.90	-0.4
2,889,396	+				-0.2
2,889,405	+				+0.4
2,889,406	-				-0.0
2,889,406	-				-0.2
2,889,406	-				+0.4
2,889,406	-				-0.2
2,889,567	+				-2.7
2,889,670	+				+0.4
2,889,670	+				+0.8
2,889,670	+				+1.2
2,889,671	-				+0.3
2,889,671	-				+0.6
2,889,671	-				+0.4
2,889,796	+		Psest_2700	0.19	+0.6
2,889,796	+		Psest_2700	0.19	-1.5
2,889,796	+		Psest_2700	0.19	-0.8
2,889,796	+		Psest_2700	0.19	-0.4
2,889,796	+		Psest_2700	0.19	-0.2
2,889,796	+		Psest_2700	0.19	-1.8
2,889,797	-		Psest_2700	0.19	+0.1
2,889,797	-		Psest_2700	0.19	+0.1
2,889,797	-		Psest_2700	0.19	-0.6
2,889,797	-		Psest_2700	0.19	-0.9
2,889,797	-		Psest_2700	0.19	-0.3
2,889,797	-		Psest_2700	0.19	-0.6
2,889,839	-		Psest_2700	0.23	+1.0
2,889,839	-		Psest_2700	0.23	+0.1
2,889,839	-		Psest_2700	0.23	+1.4
2,889,916	+		Psest_2700	0.31	+1.4
2,889,916	+		Psest_2700	0.31	-0.8
2,889,917	-		Psest_2700	0.31	+1.0
2,889,917	-		Psest_2700	0.31	-0.8
2,889,917	-		Psest_2700	0.31	-0.1
2,890,018	+		Psest_2700	0.42	+2.6
2,890,019	-		Psest_2700	0.42	-0.6
2,890,019	-		Psest_2700	0.42	-1.6
2,890,231	+		Psest_2700	0.64	-0.0
2,890,231	+		Psest_2700	0.64	+0.9
2,890,232	-		Psest_2700	0.64	-0.7
2,890,232	-		Psest_2700	0.64	-1.3
2,890,288	+		Psest_2700	0.70	+0.4
2,890,393	+		Psest_2700	0.81	-1.0
2,890,393	+		Psest_2700	0.81	+0.2
2,890,393	+		Psest_2700	0.81	-0.1
2,890,504	+				+0.6
2,890,504	+				+0.6
2,890,504	+				+0.6
2,890,505	-				-1.1
2,890,669	+				-0.3
2,890,670	-				-0.3
2,890,672	-				-0.6
2,890,672	-				+1.7
2,890,672	-				-0.3
2,890,672	-				-0.6
2,890,687	+				+0.3
2,890,688	-				-0.2
2,890,688	-				+2.0
2,890,688	-				-1.6
2,890,688	-				-0.5
2,890,712	+				-0.3
2,890,712	+				+0.6
2,890,712	+				-0.1
2,890,712	+				-0.6
2,890,712	+				-1.7
2,890,712	+				+0.2
2,890,712	+				-0.3
2,890,712	+				-0.3
2,890,712	+				-1.4
2,890,713	-				+0.0
2,890,713	-				+0.6
2,890,713	-				-0.7
2,890,713	-				-2.6
2,890,713	-				+0.6
2,890,713	-				+0.3
2,890,742	+				+0.7
2,890,786	-				-0.4
2,890,810	+				-0.2
2,890,927	+		Psest_2701	0.15	-0.8
2,890,927	+		Psest_2701	0.15	+1.3
2,890,927	+		Psest_2701	0.15	+0.8
2,890,928	-		Psest_2701	0.15	-0.8
2,890,949	+		Psest_2701	0.17	+1.0
2,890,949	+		Psest_2701	0.17	-0.8
2,890,949	+		Psest_2701	0.17	-0.3
2,890,950	-		Psest_2701	0.17	-0.2
2,890,951	+		Psest_2701	0.17	-0.4
2,890,951	+		Psest_2701	0.17	-1.3
2,890,951	+		Psest_2701	0.17	+2.2
2,890,951	+		Psest_2701	0.17	-1.6
2,890,951	+		Psest_2701	0.17	-0.7
2,890,951	+		Psest_2701	0.17	-1.8
2,890,951	+		Psest_2701	0.17	+1.4
2,890,952	-		Psest_2701	0.17	+1.5
2,890,952	-		Psest_2701	0.17	-0.6
2,890,952	-		Psest_2701	0.17	+0.2
2,890,952	-		Psest_2701	0.17	-1.0
2,890,952	-		Psest_2701	0.17	-0.1
2,890,952	-		Psest_2701	0.17	+0.8
2,890,952	-		Psest_2701	0.17	+0.1
2,890,987	+		Psest_2701	0.20	-1.0
2,890,987	+		Psest_2701	0.20	-0.1
2,890,987	+		Psest_2701	0.20	-1.4
2,890,987	+		Psest_2701	0.20	-0.6
2,890,988	-		Psest_2701	0.20	+0.5
2,890,988	-		Psest_2701	0.20	-0.1
2,890,988	-		Psest_2701	0.20	-3.0
2,890,988	-		Psest_2701	0.20	-0.9
2,890,988	-		Psest_2701	0.20	+0.3
2,891,066	+		Psest_2701	0.27	+0.7
2,891,066	+		Psest_2701	0.27	+0.5
2,891,066	+		Psest_2701	0.27	-1.1
2,891,067	-		Psest_2701	0.27	+2.0
2,891,067	-		Psest_2701	0.27	-0.5
2,891,110	+		Psest_2701	0.31	-0.0
2,891,110	+		Psest_2701	0.31	+0.4
2,891,110	+		Psest_2701	0.31	-0.2
2,891,110	+		Psest_2701	0.31	-1.6
2,891,111	-		Psest_2701	0.31	-1.5
2,891,111	-		Psest_2701	0.31	-0.6
2,891,111	-		Psest_2701	0.31	-1.0
2,891,111	-		Psest_2701	0.31	-0.1
2,891,111	-		Psest_2701	0.31	+0.0
2,891,295	+		Psest_2701	0.47	+0.7
2,891,295	+		Psest_2701	0.47	-1.4
2,891,361	-		Psest_2701	0.53	-1.6
2,891,395	+		Psest_2701	0.56	+0.4
2,891,395	+		Psest_2701	0.56	-0.0
2,891,395	+		Psest_2701	0.56	+0.8
2,891,395	+		Psest_2701	0.56	+0.4
2,891,396	-		Psest_2701	0.56	+0.4
2,891,396	-		Psest_2701	0.56	-1.8
2,891,396	-		Psest_2701	0.56	-0.9
2,891,456	+		Psest_2701	0.61	-0.2
2,891,457	-		Psest_2701	0.61	+1.7