Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1382

Experiment: Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (~7.5 mM 3-keto-trehalose) 0.5x (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (~7.5 mM 3-keto-trehalose) 0.5x (C)
1,709,270	-		BT1381	0.89	-2.0
1,709,276	+		BT1381	0.89	-1.6
1,709,360	+				-1.4
1,709,513	+				+1.8
1,709,588	-				-1.1
1,709,693	+				-1.9
1,709,898	+				-1.0
1,710,110	-				-1.1
1,710,133	+				-0.4
1,710,168	+				-0.5
1,710,178	+				-1.4
1,710,179	-				-2.6
1,710,182	+				+0.3
1,710,194	+				+0.8
1,710,247	+				+2.0
1,710,292	+				+1.6
1,710,323	+				-2.5
1,710,326	-				+1.6
1,710,351	-		BT1382	0.14	+0.8
1,710,373	-		BT1382	0.18	-1.0
1,710,433	+		BT1382	0.28	-1.2
1,710,487	+		BT1382	0.37	-2.0
1,710,530	-		BT1382	0.44	+0.6
1,710,561	-		BT1382	0.49	-3.4
1,710,605	+		BT1382	0.57	-0.7
1,710,605	+		BT1382	0.57	-1.1
1,710,628	+		BT1382	0.61	-2.6
1,710,644	+		BT1382	0.63	-1.2
1,710,654	+		BT1382	0.65	+1.1
1,710,681	+		BT1382	0.70	-0.0
1,710,684	-		BT1382	0.70	-0.7
1,710,684	-		BT1382	0.70	-1.9
1,710,684	-		BT1382	0.70	-2.7
1,710,699	+		BT1382	0.73	-2.3
1,710,718	+		BT1382	0.76	-1.2
1,710,778	+		BT1382	0.86	-0.4
1,710,779	-		BT1382	0.86	-0.5
1,710,781	+		BT1382	0.87	-1.0
1,710,783	+		BT1382	0.87	-2.1
1,710,784	-		BT1382	0.87	-0.2
1,710,791	-		BT1382	0.88	-1.2
1,710,800	+		BT1382	0.90	-0.5
1,710,932	-				+1.6
1,710,960	-				-0.2
1,710,981	-				-2.0
1,711,014	-				-0.0
1,711,052	+				-3.2
1,711,056	+				+1.0
1,711,057	-				-0.4
1,711,075	+				-2.3
1,711,075	+				+0.3
1,711,454	-		BT1383	0.46	-1.7
1,711,557	+		BT1383	0.59	-1.4
1,711,557	+		BT1383	0.59	-3.0
1,711,557	+		BT1383	0.59	-0.0
1,711,558	-		BT1383	0.59	-0.0
1,711,558	-		BT1383	0.59	+0.1
1,711,566	+		BT1383	0.60	-0.7
1,711,570	-		BT1383	0.60	+1.1
1,711,625	-		BT1383	0.67	-2.7
1,711,715	+		BT1383	0.77	-1.5
1,711,761	+		BT1383	0.83	-1.7
1,711,762	-		BT1383	0.83	+0.3
1,711,762	-		BT1383	0.83	-0.7
1,711,780	+		BT1383	0.85	+0.1
1,711,846	-				+0.4
1,711,848	-				-1.2
1,711,848	-				-1.2