Experiment: Maltitol 20mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0611 and BT0612 are separated by 27 nucleotides BT0612 and BT0613 are separated by 222 nucleotides
BT0611: BT0611 - glycosyltransferase (NCBI ptt file), at 755,202 to 755,795
BT0611
BT0612: BT0612 - putative aminotransferase (NCBI ptt file), at 755,823 to 757,097
BT0612
BT0613: BT0613 - putative membrane protein involved in polysaccharide export (NCBI ptt file), at 757,320 to 758,273
BT0613
Position (kb) 755
756
757
758 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 754.854 kb on - strand at 754.872 kb on - strand at 754.874 kb on - strand at 754.876 kb on - strand at 754.954 kb on - strand at 754.978 kb on - strand at 754.999 kb on - strand at 755.219 kb on + strand at 755.266 kb on + strand, within BT0611 at 755.381 kb on - strand, within BT0611 at 755.449 kb on - strand, within BT0611 at 755.449 kb on - strand, within BT0611 at 755.542 kb on - strand, within BT0611 at 755.588 kb on - strand, within BT0611 at 755.600 kb on + strand, within BT0611 at 755.783 kb on + strand at 755.970 kb on + strand, within BT0612 at 755.978 kb on + strand, within BT0612 at 755.978 kb on + strand, within BT0612 at 755.984 kb on + strand, within BT0612 at 755.992 kb on + strand, within BT0612 at 755.993 kb on - strand, within BT0612 at 756.080 kb on + strand, within BT0612 at 756.081 kb on - strand, within BT0612 at 756.081 kb on - strand, within BT0612 at 756.127 kb on + strand, within BT0612 at 756.127 kb on + strand, within BT0612 at 756.203 kb on + strand, within BT0612 at 756.247 kb on - strand, within BT0612 at 756.515 kb on + strand, within BT0612 at 756.654 kb on + strand, within BT0612 at 756.662 kb on + strand, within BT0612 at 756.717 kb on - strand, within BT0612 at 756.831 kb on + strand, within BT0612 at 757.007 kb on + strand at 757.052 kb on - strand at 757.052 kb on - strand at 757.080 kb on - strand at 757.126 kb on + strand at 757.163 kb on - strand at 757.176 kb on - strand at 757.176 kb on - strand at 757.251 kb on - strand at 757.355 kb on + strand at 757.404 kb on - strand at 757.590 kb on - strand, within BT0613 at 757.662 kb on - strand, within BT0613 at 757.750 kb on + strand, within BT0613 at 757.782 kb on - strand, within BT0613 at 757.898 kb on - strand, within BT0613 at 757.898 kb on - strand, within BT0613 at 757.898 kb on - strand, within BT0613 at 758.018 kb on - strand, within BT0613 at 758.018 kb on - strand, within BT0613
Per-strain Table
Position Strand Gene LocusTag Fraction Maltitol 20mM (C) remove 754,854 - +1.6 754,872 - -2.6 754,874 - -1.1 754,876 - -0.1 754,954 - +0.5 754,978 - +1.4 754,999 - -1.7 755,219 + -1.4 755,266 + BT0611 0.11 -1.6 755,381 - BT0611 0.30 -1.5 755,449 - BT0611 0.42 -1.4 755,449 - BT0611 0.42 -1.3 755,542 - BT0611 0.57 -2.3 755,588 - BT0611 0.65 +1.1 755,600 + BT0611 0.67 -0.4 755,783 + -1.4 755,970 + BT0612 0.12 -1.9 755,978 + BT0612 0.12 +0.0 755,978 + BT0612 0.12 -1.0 755,984 + BT0612 0.13 -1.6 755,992 + BT0612 0.13 -1.0 755,993 - BT0612 0.13 -0.4 756,080 + BT0612 0.20 -1.7 756,081 - BT0612 0.20 -1.0 756,081 - BT0612 0.20 -1.7 756,127 + BT0612 0.24 -0.7 756,127 + BT0612 0.24 -0.4 756,203 + BT0612 0.30 +2.6 756,247 - BT0612 0.33 -0.4 756,515 + BT0612 0.54 -1.6 756,654 + BT0612 0.65 -1.6 756,662 + BT0612 0.66 +0.1 756,717 - BT0612 0.70 -0.9 756,831 + BT0612 0.79 -2.0 757,007 + -2.0 757,052 - -1.2 757,052 - +0.2 757,080 - -0.0 757,126 + -1.3 757,163 - +1.6 757,176 - -1.6 757,176 - -1.2 757,251 - -2.4 757,355 + -1.1 757,404 - -1.6 757,590 - BT0613 0.28 -3.0 757,662 - BT0613 0.36 -0.4 757,750 + BT0613 0.45 +0.3 757,782 - BT0613 0.48 -2.0 757,898 - BT0613 0.61 +0.1 757,898 - BT0613 0.61 +1.6 757,898 - BT0613 0.61 -0.1 758,018 - BT0613 0.73 -1.0 758,018 - BT0613 0.73 -3.0
Or see this region's nucleotide sequence