Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS26740

Experiment: 4-Hydroxybenzoic Acid (C) and Ammonium chloride (N); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Hydroxybenzoic Acid (C) and Ammonium chloride (N); with MOPS
5,970,685	+		PFLU_RS26735	0.31	-0.6
5,970,686	-		PFLU_RS26735	0.31	-0.6
5,970,686	-		PFLU_RS26735	0.31	-1.6
5,970,686	-		PFLU_RS26735	0.31	+0.4
5,970,987	+		PFLU_RS26735	0.53	+1.4
5,970,987	+		PFLU_RS26735	0.53	+1.0
5,970,988	-		PFLU_RS26735	0.53	-2.4
5,970,988	-		PFLU_RS26735	0.53	-1.6
5,971,042	-		PFLU_RS26735	0.57	-0.0
5,971,042	-		PFLU_RS26735	0.57	-1.0
5,971,092	-		PFLU_RS26735	0.61	+0.4
5,971,356	-		PFLU_RS26735	0.81	-3.3
5,971,356	-		PFLU_RS26735	0.81	-1.8
5,971,369	-		PFLU_RS26735	0.82	-1.8
5,971,375	+		PFLU_RS26735	0.82	-1.2
5,971,375	+		PFLU_RS26735	0.82	-1.8
5,971,375	+		PFLU_RS26735	0.82	-0.3
5,971,375	+		PFLU_RS26735	0.82	-1.2
5,971,375	+		PFLU_RS26735	0.82	+1.0
5,971,375	+		PFLU_RS26735	0.82	+0.4
5,971,375	+		PFLU_RS26735	0.82	-1.8
5,971,375	+		PFLU_RS26735	0.82	+2.0
5,971,375	+		PFLU_RS26735	0.82	-2.6
5,971,376	-		PFLU_RS26735	0.82	-2.5
5,971,376	-		PFLU_RS26735	0.82	-1.6
5,971,376	-		PFLU_RS26735	0.82	-0.0
5,971,376	-		PFLU_RS26735	0.82	-2.5
5,971,380	-		PFLU_RS26735	0.82	-0.0
5,971,380	-		PFLU_RS26735	0.82	-0.8
5,971,380	-		PFLU_RS26735	0.82	-0.2
5,971,380	-		PFLU_RS26735	0.82	-1.9
5,971,597	-				+2.0
5,971,606	-				-0.3
5,971,606	-				-2.5
5,971,606	-				-1.0
5,971,606	-				-2.0
5,971,606	-				-0.8
5,971,617	+				+0.4
5,971,617	+				+1.3
5,971,617	+				+2.0
5,971,617	+				+1.0
5,971,618	-				+0.1
5,971,618	-				+0.4
5,971,618	-				+2.0
5,971,629	+				-2.2
5,971,630	-				-1.3
5,971,630	-				-2.7
5,971,676	+				-3.2
5,971,676	+				+0.2
5,971,677	-				-1.0
5,971,677	-				+0.5
5,971,677	-				+1.5
5,971,677	-				+0.1
5,971,719	+				+2.0
5,971,719	+				-0.3
5,971,719	+				-2.3
5,971,719	+				-2.9
5,971,719	+				-2.5
5,971,719	+				-2.0
5,971,720	-				-0.9
5,971,720	-				-0.3
5,971,720	-				-1.5
5,971,720	-				-3.5
5,971,720	-				-2.4
5,971,720	-				-3.9
5,971,720	-				-0.3
5,971,720	-				+0.6
5,971,720	-				-2.6
5,971,720	-				-0.3
5,971,721	+				-0.6
5,971,721	+				-1.7
5,971,721	+				-1.1
5,971,721	+				+0.1
5,971,722	-				+0.4
5,971,722	-				-3.5
5,971,722	-				-0.3
5,971,722	-				-0.8
5,971,722	-				-3.4
5,971,722	-				-1.3
5,971,722	-				-1.3
5,971,935	+		PFLU_RS26740	0.14	-1.2
5,971,936	-		PFLU_RS26740	0.14	-0.8
5,971,936	-		PFLU_RS26740	0.14	-3.2
5,971,996	-		PFLU_RS26740	0.17	-0.0
5,972,070	+		PFLU_RS26740	0.21	-2.8
5,972,070	+		PFLU_RS26740	0.21	-1.6
5,972,070	+		PFLU_RS26740	0.21	-1.8
5,972,070	+		PFLU_RS26740	0.21	-0.9
5,972,070	+		PFLU_RS26740	0.21	-1.8
5,972,070	+		PFLU_RS26740	0.21	-2.3
5,972,070	+		PFLU_RS26740	0.21	-2.5
5,972,071	-		PFLU_RS26740	0.21	-0.6
5,972,071	-		PFLU_RS26740	0.21	-1.0
5,972,071	-		PFLU_RS26740	0.21	-0.8
5,972,071	-		PFLU_RS26740	0.21	-1.3
5,972,071	-		PFLU_RS26740	0.21	-0.5
5,972,124	-		PFLU_RS26740	0.24	-2.6
5,972,124	-		PFLU_RS26740	0.24	-2.2
5,972,126	+		PFLU_RS26740	0.24	-1.6
5,972,126	+		PFLU_RS26740	0.24	+0.1
5,972,126	+		PFLU_RS26740	0.24	-2.1
5,972,126	+		PFLU_RS26740	0.24	-1.1
5,972,126	+		PFLU_RS26740	0.24	-2.7
5,972,126	+		PFLU_RS26740	0.24	-1.7
5,972,126	+		PFLU_RS26740	0.24	-2.5
5,972,126	+		PFLU_RS26740	0.24	-2.5
5,972,126	+		PFLU_RS26740	0.24	-2.4
5,972,126	+		PFLU_RS26740	0.24	-3.2
5,972,126	+		PFLU_RS26740	0.24	-2.0
5,972,126	+		PFLU_RS26740	0.24	-1.8
5,972,126	+		PFLU_RS26740	0.24	-2.0
5,972,126	+		PFLU_RS26740	0.24	-1.9
5,972,126	+		PFLU_RS26740	0.24	-1.8
5,972,126	+		PFLU_RS26740	0.24	-1.8
5,972,126	+		PFLU_RS26740	0.24	-3.7
5,972,126	+		PFLU_RS26740	0.24	-0.1
5,972,126	+		PFLU_RS26740	0.24	-0.8
5,972,126	+		PFLU_RS26740	0.24	-2.9
5,972,126	+		PFLU_RS26740	0.24	-1.7
5,972,126	+		PFLU_RS26740	0.24	-1.0
5,972,127	-		PFLU_RS26740	0.24	-1.0
5,972,127	-		PFLU_RS26740	0.24	-1.3
5,972,127	-		PFLU_RS26740	0.24	-2.4
5,972,127	-		PFLU_RS26740	0.24	+1.7
5,972,127	-		PFLU_RS26740	0.24	+0.4
5,972,127	-		PFLU_RS26740	0.24	-0.2
5,972,127	-		PFLU_RS26740	0.24	+0.2
5,972,127	-		PFLU_RS26740	0.24	+0.8
5,972,127	-		PFLU_RS26740	0.24	-1.9
5,972,127	-		PFLU_RS26740	0.24	-1.5
5,972,127	-		PFLU_RS26740	0.24	-2.9
5,972,127	-		PFLU_RS26740	0.24	-3.5
5,972,127	-		PFLU_RS26740	0.24	-0.6
5,972,127	-		PFLU_RS26740	0.24	-0.8
5,972,127	-		PFLU_RS26740	0.24	-2.4
5,972,127	-		PFLU_RS26740	0.24	-2.8
5,972,127	-		PFLU_RS26740	0.24	-2.9
5,972,127	-		PFLU_RS26740	0.24	-3.1
5,972,127	-		PFLU_RS26740	0.24	-2.4
5,972,127	-		PFLU_RS26740	0.24	-2.0
5,972,127	-		PFLU_RS26740	0.24	-0.6
5,972,127	-		PFLU_RS26740	0.24	-2.9
5,972,127	-		PFLU_RS26740	0.24	-1.0
5,972,127	-		PFLU_RS26740	0.24	-1.6
5,972,127	-		PFLU_RS26740	0.24	-2.3
5,972,127	-		PFLU_RS26740	0.24	-0.2
5,972,127	-		PFLU_RS26740	0.24	-2.3
5,972,127	-		PFLU_RS26740	0.24	-2.5
5,972,127	-		PFLU_RS26740	0.24	-0.3
5,972,127	-		PFLU_RS26740	0.24	-2.1
5,972,127	-		PFLU_RS26740	0.24	-0.7
5,972,127	-		PFLU_RS26740	0.24	-2.5
5,972,190	+		PFLU_RS26740	0.27	-2.6
5,972,191	-		PFLU_RS26740	0.27	-3.1
5,972,191	-		PFLU_RS26740	0.27	-4.3
5,972,191	-		PFLU_RS26740	0.27	-2.3
5,972,257	+		PFLU_RS26740	0.31	-1.2
5,972,257	+		PFLU_RS26740	0.31	-0.5
5,972,257	+		PFLU_RS26740	0.31	-1.5
5,972,258	-		PFLU_RS26740	0.31	-2.2
5,972,258	-		PFLU_RS26740	0.31	-0.8
5,972,258	-		PFLU_RS26740	0.31	-2.2
5,972,258	-		PFLU_RS26740	0.31	-1.7
5,972,258	-		PFLU_RS26740	0.31	-0.6
5,972,260	+		PFLU_RS26740	0.31	-2.2
5,972,260	+		PFLU_RS26740	0.31	-2.3
5,972,260	+		PFLU_RS26740	0.31	-1.3
5,972,260	+		PFLU_RS26740	0.31	-3.8
5,972,260	+		PFLU_RS26740	0.31	-0.9
5,972,260	+		PFLU_RS26740	0.31	-1.9
5,972,261	-		PFLU_RS26740	0.31	+1.3
5,972,261	-		PFLU_RS26740	0.31	-0.5
5,972,261	-		PFLU_RS26740	0.31	-0.0
5,972,261	-		PFLU_RS26740	0.31	-3.2
5,972,261	-		PFLU_RS26740	0.31	-1.2
5,972,287	-		PFLU_RS26740	0.32	-1.6
5,972,963	+		PFLU_RS26740	0.68	-2.5
5,972,963	+		PFLU_RS26740	0.68	-1.5
5,972,963	+		PFLU_RS26740	0.68	-1.5
5,972,963	+		PFLU_RS26740	0.68	+0.2
5,972,964	-		PFLU_RS26740	0.68	-0.6
5,972,964	-		PFLU_RS26740	0.68	-0.5
5,972,964	-		PFLU_RS26740	0.68	-0.0
5,972,964	-		PFLU_RS26740	0.68	-1.5
5,972,964	-		PFLU_RS26740	0.68	-2.9
5,973,259	-		PFLU_RS26740	0.83	-0.0
5,973,467	+				-1.0
5,973,467	+				+0.8
5,973,467	+				-0.7
5,973,467	+				-0.6
5,973,467	+				+0.3
5,973,468	-				-1.7
5,973,468	-				-2.9
5,973,468	-				-0.5
5,973,468	-				-2.8
5,973,468	-				-0.0
5,973,587	+				-1.3
5,973,587	+				-0.6
5,973,587	+				-1.9
5,973,588	-				+1.5
5,973,588	-				+1.1
5,973,590	+				-1.2
5,973,590	+				-1.0
5,973,591	-				+2.0
5,973,591	-				+0.2
5,973,591	-				+1.8
5,973,591	-				+2.6
5,973,591	-				+0.8
5,973,591	-				+1.9
5,973,828	+				+2.3
5,973,828	+				+2.8
5,973,834	+				+0.2
5,973,834	+				-0.3
5,973,834	+				-2.3
5,973,834	+				+0.3
5,973,834	+				-1.0
5,973,834	+				+0.6
5,973,834	+				-1.0
5,973,834	+				-1.8
5,973,834	+				+1.4
5,973,834	+				+0.5
5,973,834	+				+1.6
5,973,835	-				-1.3
5,973,835	-				-0.5
5,973,835	-				-3.1
5,973,835	-				-3.4
5,973,835	-				-1.0
5,973,835	-				-2.2
5,973,835	-				+1.3
5,973,835	-				-2.5
5,973,835	-				-1.0
5,973,835	-				-1.2
5,973,835	-				-1.0
5,973,835	-				-1.7
5,973,835	-				-2.1
5,973,835	-				-2.3
5,973,835	-				-2.8
5,973,848	+				-2.9
5,973,848	+				+0.6
5,973,849	-				-0.3
5,973,849	-				+1.0
5,973,862	+				-1.6
5,973,910	+				-1.3
5,973,910	+				+0.4
5,973,910	+				-1.7
5,973,910	+				-1.0
5,973,910	+				-0.0
5,973,911	-				-0.0
5,973,911	-				+1.0
5,973,911	-				-0.8
5,973,911	-				-3.3
5,973,911	-				+0.0
5,973,919	+				-0.8
5,973,919	+				-1.2
5,973,919	+				-2.4
5,973,919	+				-1.2
5,973,919	+				-2.5
5,973,919	+				-1.6
5,973,919	+				-1.3
5,973,919	+				-1.5
5,973,919	+				-2.6
5,973,919	+				-3.0
5,973,919	+				-2.0
5,973,920	-				-0.0
5,973,920	-				-3.1
5,973,920	-				-2.3
5,973,920	-				-1.3
5,973,920	-				+1.7
5,973,920	-				-2.8
5,973,920	-				-2.3
5,973,920	-				-1.9
5,973,920	-				-1.7
5,973,958	+				-4.1
5,973,958	+				-0.0
5,973,958	+				-1.2
5,973,958	+				-3.5
5,973,958	+				-1.2
5,973,958	+				-2.6
5,973,958	+				-2.6
5,973,958	+				-0.6
5,973,958	+				-3.6
5,973,958	+				-1.0
5,973,958	+				-1.8
5,973,958	+				-1.7
5,973,958	+				-2.6
5,973,959	-				-1.0
5,973,959	-				-0.0
5,973,959	-				-0.3
5,973,959	-				-2.8
5,973,959	-				-0.5
5,973,959	-				-1.7
5,973,959	-				+0.0
5,973,959	-				-1.8
5,973,959	-				-2.0
5,973,959	-				-3.1
5,973,959	-				-1.0
5,973,959	-				-1.3
5,973,969	+				-0.1
5,973,969	+				-3.3
5,973,969	+				-2.4
5,973,970	-				-0.2
5,973,970	-				-1.3
5,973,970	-				-1.8
5,973,970	-				+0.7
5,973,970	-				-1.8
5,973,970	-				-2.0
5,973,970	-				-1.5
5,973,970	-				-2.0
5,974,300	+		PFLU_RS26745	0.29	-2.5
5,974,300	+		PFLU_RS26745	0.29	-2.1
5,974,300	+		PFLU_RS26745	0.29	-2.1
5,974,300	+		PFLU_RS26745	0.29	+0.6
5,974,300	+		PFLU_RS26745	0.29	-0.6
5,974,300	+		PFLU_RS26745	0.29	-2.0
5,974,300	+		PFLU_RS26745	0.29	-1.6
5,974,301	-		PFLU_RS26745	0.29	-2.2
5,974,301	-		PFLU_RS26745	0.29	-2.0
5,974,301	-		PFLU_RS26745	0.29	-1.7
5,974,301	-		PFLU_RS26745	0.29	-3.0
5,974,301	-		PFLU_RS26745	0.29	-0.6
5,974,301	-		PFLU_RS26745	0.29	-2.7
5,974,463	+		PFLU_RS26745	0.40	-3.1
5,974,463	+		PFLU_RS26745	0.40	-0.3
5,974,490	+		PFLU_RS26745	0.42	-0.8
5,974,491	-		PFLU_RS26745	0.42	-1.9
5,974,515	+		PFLU_RS26745	0.43	-0.4