Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS22410

Experiment: 4-Hydroxybenzoic Acid (C) and Ammonium chloride (N); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Hydroxybenzoic Acid (C) and Ammonium chloride (N); with MOPS
5,038,398	+				+0.5
5,038,398	+				-0.1
5,038,398	+				-1.2
5,038,408	+				+1.4
5,038,408	+				+0.1
5,038,408	+				-0.4
5,038,408	+				-2.2
5,038,408	+				+1.0
5,038,408	+				+1.5
5,038,408	+				-0.9
5,038,408	+				-0.2
5,038,408	+				+1.0
5,038,408	+				-2.2
5,038,409	-				+2.6
5,038,409	-				+1.2
5,038,409	-				+2.3
5,038,409	-				-0.1
5,038,409	-				+2.1
5,038,409	-				+0.6
5,038,409	-				-1.5
5,038,409	-				-1.0
5,038,428	+				+0.8
5,038,428	+				+0.9
5,038,428	+				+0.6
5,038,428	+				+1.2
5,038,428	+				-0.6
5,038,429	-				+0.3
5,038,429	-				-1.8
5,038,429	-				+0.3
5,038,429	-				+1.6
5,038,429	-				+1.2
5,038,429	-				-1.5
5,038,429	-				+1.8
5,038,561	+				+1.6
5,038,561	+				+0.1
5,038,562	-				-0.0
5,038,589	+				+0.1
5,038,589	+				-3.4
5,038,589	+				-0.7
5,038,589	+				+0.2
5,038,589	+				+0.6
5,038,589	+				-2.2
5,038,589	+				-1.2
5,038,589	+				-1.1
5,038,589	+				-2.5
5,038,589	+				-1.3
5,038,589	+				+1.3
5,038,589	+				+0.9
5,038,590	-				-0.4
5,038,590	-				-0.0
5,038,590	-				-1.7
5,038,590	-				-1.7
5,038,590	-				+0.4
5,038,590	-				+1.6
5,038,590	-				+0.3
5,038,590	-				+2.2
5,038,590	-				-3.3
5,038,590	-				-0.3
5,038,590	-				+1.9
5,038,590	-				-1.5
5,038,591	+				-0.4
5,038,591	+				+1.6
5,038,591	+				+0.6
5,038,591	+				-1.9
5,038,591	+				+1.8
5,038,591	+				-3.7
5,038,591	+				+0.1
5,038,591	+				-0.6
5,038,591	+				+1.5
5,038,591	+				-1.9
5,038,591	+				+1.8
5,038,591	+				+0.6
5,038,591	+				+1.0
5,038,591	+				-1.2
5,038,591	+				-0.8
5,038,591	+				+2.1
5,038,591	+				+0.3
5,038,591	+				+0.9
5,038,591	+				-0.8
5,038,591	+				-0.1
5,038,591	+				-1.1
5,038,591	+				-0.4
5,038,591	+				+0.6
5,038,591	+				+2.1
5,038,591	+				-1.0
5,038,591	+				-1.3
5,038,591	+				-0.5
5,038,592	-				-1.9
5,038,592	-				-0.4
5,038,592	-				+1.6
5,038,592	-				-1.8
5,038,592	-				+1.0
5,038,592	-				-0.2
5,038,592	-				+0.3
5,038,592	-				-2.1
5,038,592	-				-0.3
5,038,592	-				-1.2
5,038,592	-				-0.8
5,038,592	-				-0.2
5,038,592	-				+0.1
5,038,592	-				-0.7
5,038,592	-				-1.4
5,038,592	-				+0.4
5,038,592	-				+0.3
5,038,592	-				-2.5
5,038,592	-				+0.5
5,038,592	-				+0.7
5,038,592	-				-1.2
5,038,592	-				+0.6
5,038,592	-				+2.1
5,038,592	-				+0.3
5,038,592	-				-2.5
5,038,624	+		PFLU_RS22410	0.13	+1.3
5,038,624	+		PFLU_RS22410	0.13	-0.4
5,038,625	-		PFLU_RS22410	0.13	-1.1
5,038,625	-		PFLU_RS22410	0.13	+0.2
5,038,691	+		PFLU_RS22410	0.18	+0.8
5,038,691	+		PFLU_RS22410	0.18	-0.9
5,038,691	+		PFLU_RS22410	0.18	+1.5
5,038,691	+		PFLU_RS22410	0.18	+2.2
5,038,691	+		PFLU_RS22410	0.18	+1.1
5,038,692	-		PFLU_RS22410	0.19	-3.3
5,038,692	-		PFLU_RS22410	0.19	-1.9
5,038,720	+		PFLU_RS22410	0.21	+0.6
5,038,720	+		PFLU_RS22410	0.21	-1.4
5,038,721	-		PFLU_RS22410	0.21	+0.5
5,038,721	-		PFLU_RS22410	0.21	-0.2
5,038,790	+		PFLU_RS22410	0.27	+0.1
5,038,796	+		PFLU_RS22410	0.28	-2.7
5,038,796	+		PFLU_RS22410	0.28	-2.7
5,038,797	-		PFLU_RS22410	0.28	-1.6
5,038,797	-		PFLU_RS22410	0.28	+1.4
5,038,797	-		PFLU_RS22410	0.28	+0.3
5,038,797	-		PFLU_RS22410	0.28	-0.3
5,038,983	+		PFLU_RS22410	0.44	-1.0
5,038,983	+		PFLU_RS22410	0.44	-2.3
5,038,984	-		PFLU_RS22410	0.44	-0.4
5,038,984	-		PFLU_RS22410	0.44	-0.9
5,039,120	-		PFLU_RS22410	0.56	-1.7
5,039,173	+		PFLU_RS22410	0.60	-0.8
5,039,494	+		PFLU_RS22410	0.88	-1.2
5,039,494	+		PFLU_RS22410	0.88	+0.4
5,039,494	+		PFLU_RS22410	0.88	-2.9
5,039,494	+		PFLU_RS22410	0.88	-2.6
5,039,494	+		PFLU_RS22410	0.88	+1.6
5,039,494	+		PFLU_RS22410	0.88	+2.1
5,039,494	+		PFLU_RS22410	0.88	-0.7
5,039,495	-		PFLU_RS22410	0.88	-0.2
5,039,495	-		PFLU_RS22410	0.88	+0.2
5,039,495	-		PFLU_RS22410	0.88	-1.4
5,039,495	-		PFLU_RS22410	0.88	-2.5
5,039,608	+				-0.3
5,039,608	+				-2.1
5,039,609	-				+2.2
5,039,609	-				-0.2
5,039,609	-				-0.4
5,039,609	-				-0.1
5,039,617	+				+1.5
5,039,617	+				+1.6
5,039,618	-				-0.5
5,039,618	-				-1.0
5,039,659	+				-0.8
5,039,689	-				-1.5
5,039,689	-				+1.5
5,039,702	+				+0.1
5,039,702	+				+0.2
5,039,702	+				+1.3
5,039,703	-				+0.2
5,039,703	-				+0.3
5,039,703	-				-1.4
5,039,767	+				+1.1
5,039,767	+				-1.5
5,039,767	+				+0.4
5,039,767	+				+4.8
5,039,767	+				-0.4
5,039,768	-				+1.5
5,039,768	-				-2.7
5,039,768	-				+0.5
5,039,836	+				-2.8
5,039,836	+				-2.4
5,039,836	+				+0.6
5,039,836	+				-0.6
5,039,836	+				+0.4
5,039,836	+				+1.3
5,039,837	-				+0.5
5,039,837	-				-0.2
5,039,851	+				-0.8
5,039,851	+				+0.7
5,039,851	+				-1.4
5,039,852	-				+1.9
5,039,852	-				-2.7
5,039,867	+				-0.4
5,039,989	+		PFLU_RS22415	0.23	-1.4
5,039,989	+		PFLU_RS22415	0.23	-0.2
5,039,989	+		PFLU_RS22415	0.23	+0.4
5,039,989	+		PFLU_RS22415	0.23	+0.6
5,039,989	+		PFLU_RS22415	0.23	-2.4
5,039,989	+		PFLU_RS22415	0.23	+1.3
5,039,989	+		PFLU_RS22415	0.23	+1.2
5,039,989	+		PFLU_RS22415	0.23	-0.5
5,039,989	+		PFLU_RS22415	0.23	+0.6
5,039,989	+		PFLU_RS22415	0.23	-1.5
5,039,989	+		PFLU_RS22415	0.23	-0.2
5,039,989	+		PFLU_RS22415	0.23	-2.1
5,039,989	+		PFLU_RS22415	0.23	-1.4
5,039,989	+		PFLU_RS22415	0.23	+1.0
5,039,990	-		PFLU_RS22415	0.23	+0.4
5,039,990	-		PFLU_RS22415	0.23	-1.2
5,039,990	-		PFLU_RS22415	0.23	-0.9
5,039,990	-		PFLU_RS22415	0.23	+1.6
5,039,990	-		PFLU_RS22415	0.23	-0.8
5,039,990	-		PFLU_RS22415	0.23	-1.5
5,039,990	-		PFLU_RS22415	0.23	-0.7
5,039,990	-		PFLU_RS22415	0.23	-2.3
5,039,990	-		PFLU_RS22415	0.23	-0.3
5,039,990	-		PFLU_RS22415	0.23	+0.9
5,040,145	+		PFLU_RS22415	0.49	-1.7
5,040,146	-		PFLU_RS22415	0.49	-2.7
5,040,146	-		PFLU_RS22415	0.49	+1.6
5,040,146	-		PFLU_RS22415	0.49	-0.4
5,040,178	+		PFLU_RS22415	0.54	+1.1
5,040,179	-		PFLU_RS22415	0.55	-0.4
5,040,179	-		PFLU_RS22415	0.55	-0.5
5,040,179	-		PFLU_RS22415	0.55	-1.8
5,040,372	-		PFLU_RS22415	0.87	+0.7
5,040,372	-		PFLU_RS22415	0.87	-0.4
5,040,487	+				-0.1
5,040,488	-				-1.0
5,040,488	-				+0.1
5,040,489	+				-0.0
5,040,489	+				-0.9
5,040,578	-				+1.1