Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS20695

Experiment: 4-Hydroxybenzoic Acid (C) and Ammonium chloride (N); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Hydroxybenzoic Acid (C) and Ammonium chloride (N); with MOPS
4,659,174	-		PFLU_RS20685	0.45	+0.4
4,659,174	-		PFLU_RS20685	0.45	-0.7
4,659,174	-		PFLU_RS20685	0.45	-0.3
4,659,253	-		PFLU_RS20685	0.52	-0.3
4,659,253	-		PFLU_RS20685	0.52	+0.8
4,659,283	+		PFLU_RS20685	0.54	-0.3
4,659,283	+		PFLU_RS20685	0.54	+0.3
4,659,283	+		PFLU_RS20685	0.54	-1.1
4,659,283	+		PFLU_RS20685	0.54	+1.2
4,659,283	+		PFLU_RS20685	0.54	+0.5
4,659,283	+		PFLU_RS20685	0.54	-0.8
4,659,283	+		PFLU_RS20685	0.54	-1.6
4,659,283	+		PFLU_RS20685	0.54	-0.8
4,659,284	-		PFLU_RS20685	0.54	+0.1
4,659,284	-		PFLU_RS20685	0.54	+0.3
4,659,284	-		PFLU_RS20685	0.54	-1.1
4,659,284	-		PFLU_RS20685	0.54	+0.3
4,659,332	+		PFLU_RS20685	0.58	-2.2
4,659,333	-		PFLU_RS20685	0.58	-2.5
4,659,333	-		PFLU_RS20685	0.58	-1.5
4,659,333	-		PFLU_RS20685	0.58	-1.3
4,659,333	-		PFLU_RS20685	0.58	+0.1
4,659,344	+		PFLU_RS20685	0.59	-0.5
4,659,344	+		PFLU_RS20685	0.59	-0.1
4,659,345	-		PFLU_RS20685	0.59	+0.4
4,659,345	-		PFLU_RS20685	0.59	-0.1
4,659,434	+		PFLU_RS20685	0.67	-1.5
4,659,434	+		PFLU_RS20685	0.67	+0.3
4,659,434	+		PFLU_RS20685	0.67	+0.4
4,659,434	+		PFLU_RS20685	0.67	-0.2
4,659,435	-		PFLU_RS20685	0.67	+1.8
4,659,435	-		PFLU_RS20685	0.67	+0.2
4,659,435	-		PFLU_RS20685	0.67	+0.4
4,659,605	+		PFLU_RS20685	0.81	-1.5
4,659,605	+		PFLU_RS20685	0.81	-0.1
4,659,605	+		PFLU_RS20685	0.81	+0.5
4,659,605	+		PFLU_RS20685	0.81	-0.2
4,659,605	+		PFLU_RS20685	0.81	+0.4
4,659,605	+		PFLU_RS20685	0.81	+1.1
4,659,605	+		PFLU_RS20685	0.81	+0.3
4,659,605	+		PFLU_RS20685	0.81	+0.0
4,659,605	+		PFLU_RS20685	0.81	-2.6
4,659,605	+		PFLU_RS20685	0.81	-0.5
4,659,605	+		PFLU_RS20685	0.81	-0.5
4,659,605	+		PFLU_RS20685	0.81	+1.5
4,659,606	-		PFLU_RS20685	0.81	+0.3
4,659,606	-		PFLU_RS20685	0.81	-0.8
4,659,606	-		PFLU_RS20685	0.81	-0.8
4,659,606	-		PFLU_RS20685	0.81	-0.1
4,659,606	-		PFLU_RS20685	0.81	+0.3
4,659,606	-		PFLU_RS20685	0.81	+1.1
4,659,606	-		PFLU_RS20685	0.81	-0.9
4,659,606	-		PFLU_RS20685	0.81	-0.5
4,659,606	-		PFLU_RS20685	0.81	+1.5
4,659,606	-		PFLU_RS20685	0.81	-0.3
4,659,606	-		PFLU_RS20685	0.81	-0.1
4,659,606	-		PFLU_RS20685	0.81	-0.2
4,659,650	+		PFLU_RS20685	0.85	-0.5
4,659,650	+		PFLU_RS20685	0.85	+1.3
4,659,650	+		PFLU_RS20685	0.85	-0.9
4,659,650	+		PFLU_RS20685	0.85	+0.9
4,659,650	+		PFLU_RS20685	0.85	+2.0
4,659,650	+		PFLU_RS20685	0.85	+0.5
4,659,650	+		PFLU_RS20685	0.85	-1.6
4,659,650	+		PFLU_RS20685	0.85	+2.1
4,659,650	+		PFLU_RS20685	0.85	-0.2
4,659,650	+		PFLU_RS20685	0.85	+1.4
4,659,650	+		PFLU_RS20685	0.85	+1.3
4,659,650	+		PFLU_RS20685	0.85	-0.0
4,659,651	-		PFLU_RS20685	0.85	-1.3
4,659,651	-		PFLU_RS20685	0.85	-0.5
4,659,651	-		PFLU_RS20685	0.85	+1.9
4,659,651	-		PFLU_RS20685	0.85	+1.1
4,659,651	-		PFLU_RS20685	0.85	+0.8
4,659,651	-		PFLU_RS20685	0.85	+1.0
4,659,651	-		PFLU_RS20685	0.85	+1.6
4,659,651	-		PFLU_RS20685	0.85	-0.8
4,659,651	-		PFLU_RS20685	0.85	+0.1
4,659,651	-		PFLU_RS20685	0.85	-2.5
4,659,651	-		PFLU_RS20685	0.85	+0.7
4,659,651	-		PFLU_RS20685	0.85	-0.4
4,659,651	-		PFLU_RS20685	0.85	-1.3
4,659,651	-		PFLU_RS20685	0.85	-0.8
4,659,651	-		PFLU_RS20685	0.85	+0.6
4,659,651	-		PFLU_RS20685	0.85	+0.1
4,659,653	+		PFLU_RS20685	0.85	-0.0
4,659,653	+		PFLU_RS20685	0.85	+1.8
4,659,654	-		PFLU_RS20685	0.85	+2.5
4,659,654	-		PFLU_RS20685	0.85	-2.5
4,659,654	-		PFLU_RS20685	0.85	-0.0
4,659,746	+				+1.3
4,659,746	+				+0.3
4,659,746	+				-0.5
4,659,746	+				-0.1
4,659,746	+				-0.0
4,659,746	+				-0.0
4,659,746	+				-1.3
4,659,785	+				+2.5
4,659,786	-				+0.7
4,659,847	+				+0.2
4,659,848	-				-2.5
4,659,951	+		PFLU_RS20690	0.38	-1.3
4,659,951	+		PFLU_RS20690	0.38	-0.9
4,659,951	+		PFLU_RS20690	0.38	-1.4
4,659,952	-		PFLU_RS20690	0.38	-0.8
4,659,952	-		PFLU_RS20690	0.38	-0.9
4,659,952	-		PFLU_RS20690	0.38	-2.1
4,660,024	+		PFLU_RS20690	0.61	-1.7
4,660,025	-		PFLU_RS20690	0.62	-0.2
4,660,079	-		PFLU_RS20690	0.79	+0.7
4,660,105	-		PFLU_RS20690	0.88	+1.0
4,660,223	+				+1.7
4,660,244	+				+1.9
4,660,244	+				+0.5
4,660,244	+				-2.3
4,660,244	+				+2.1
4,660,244	+				+2.3
4,660,244	+				+2.2
4,660,244	+				-1.5
4,660,244	+				+2.3
4,660,244	+				+1.7
4,660,244	+				+1.1
4,660,244	+				-2.4
4,660,244	+				-0.6
4,660,245	-				+0.4
4,660,245	-				-1.0
4,660,245	-				+3.4
4,660,245	-				-1.5
4,660,245	-				+3.9
4,660,245	-				+0.1
4,660,245	-				+1.0
4,660,245	-				+3.2
4,660,245	-				+3.9
4,660,245	-				-0.0
4,660,248	+				+1.6
4,660,248	+				+3.4
4,660,249	-				+5.1
4,660,249	-				+0.5
4,660,249	-				-1.3
4,660,249	-				+0.7
4,660,249	-				+2.2
4,660,249	-				+1.7
4,660,249	-				+5.2
4,660,310	+		PFLU_RS20695	0.15	+6.0
4,660,310	+		PFLU_RS20695	0.15	+0.5
4,660,367	+		PFLU_RS20695	0.20	+1.0
4,660,368	-		PFLU_RS20695	0.20	-1.0
4,660,398	+		PFLU_RS20695	0.23	+2.4
4,660,399	-		PFLU_RS20695	0.23	-1.9
4,660,399	-		PFLU_RS20695	0.23	+1.4
4,660,399	-		PFLU_RS20695	0.23	-1.8
4,660,399	-		PFLU_RS20695	0.23	-2.4
4,660,399	-		PFLU_RS20695	0.23	+2.9
4,660,421	+		PFLU_RS20695	0.25	+2.4
4,660,421	+		PFLU_RS20695	0.25	+2.7
4,660,421	+		PFLU_RS20695	0.25	+0.7
4,660,421	+		PFLU_RS20695	0.25	-1.0
4,660,422	-		PFLU_RS20695	0.25	+0.1
4,660,422	-		PFLU_RS20695	0.25	-1.0
4,660,422	-		PFLU_RS20695	0.25	+2.3
4,660,422	-		PFLU_RS20695	0.25	-3.0
4,660,422	-		PFLU_RS20695	0.25	+0.2
4,660,422	-		PFLU_RS20695	0.25	-0.2
4,660,422	-		PFLU_RS20695	0.25	+2.0
4,660,422	-		PFLU_RS20695	0.25	-0.7
4,660,595	+		PFLU_RS20695	0.41	+1.7
4,660,595	+		PFLU_RS20695	0.41	+3.2
4,660,595	+		PFLU_RS20695	0.41	+0.7
4,660,596	-		PFLU_RS20695	0.41	-0.2
4,660,596	-		PFLU_RS20695	0.41	+1.9
4,660,596	-		PFLU_RS20695	0.41	+2.7
4,660,596	-		PFLU_RS20695	0.41	+1.5
4,660,661	+		PFLU_RS20695	0.48	+2.7
4,660,661	+		PFLU_RS20695	0.48	-0.5
4,660,661	+		PFLU_RS20695	0.48	+1.6
4,660,661	+		PFLU_RS20695	0.48	+0.9
4,660,661	+		PFLU_RS20695	0.48	+2.0
4,660,661	+		PFLU_RS20695	0.48	+2.5
4,660,661	+		PFLU_RS20695	0.48	+2.2
4,660,661	+		PFLU_RS20695	0.48	+1.5
4,660,662	-		PFLU_RS20695	0.48	+2.1
4,660,662	-		PFLU_RS20695	0.48	+2.5
4,660,662	-		PFLU_RS20695	0.48	+2.0
4,660,662	-		PFLU_RS20695	0.48	-0.3
4,660,662	-		PFLU_RS20695	0.48	+2.4
4,660,662	-		PFLU_RS20695	0.48	+3.7
4,660,662	-		PFLU_RS20695	0.48	-1.4
4,660,662	-		PFLU_RS20695	0.48	+2.4
4,660,662	-		PFLU_RS20695	0.48	+0.4
4,660,802	+		PFLU_RS20695	0.61	+0.5
4,660,802	+		PFLU_RS20695	0.61	+1.2
4,660,802	+		PFLU_RS20695	0.61	+2.1
4,660,802	+		PFLU_RS20695	0.61	+2.2
4,660,802	+		PFLU_RS20695	0.61	+1.9
4,660,802	+		PFLU_RS20695	0.61	+2.0
4,660,802	+		PFLU_RS20695	0.61	+0.7
4,660,802	+		PFLU_RS20695	0.61	+0.7
4,660,803	-		PFLU_RS20695	0.61	+2.6
4,660,803	-		PFLU_RS20695	0.61	+1.1
4,660,803	-		PFLU_RS20695	0.61	+1.4
4,660,860	+		PFLU_RS20695	0.66	+0.8
4,660,860	+		PFLU_RS20695	0.66	-1.3
4,660,860	+		PFLU_RS20695	0.66	+2.8
4,660,860	+		PFLU_RS20695	0.66	+3.5
4,660,861	-		PFLU_RS20695	0.66	+1.9
4,660,861	-		PFLU_RS20695	0.66	+1.5
4,660,910	+		PFLU_RS20695	0.71	+3.1
4,660,910	+		PFLU_RS20695	0.71	-0.4
4,660,910	+		PFLU_RS20695	0.71	+4.1
4,660,910	+		PFLU_RS20695	0.71	+0.8
4,660,910	+		PFLU_RS20695	0.71	+2.8
4,660,911	-		PFLU_RS20695	0.71	+0.3
4,660,911	-		PFLU_RS20695	0.71	-0.1
4,660,911	-		PFLU_RS20695	0.71	+2.6
4,660,911	-		PFLU_RS20695	0.71	+0.5
4,660,911	-		PFLU_RS20695	0.71	-0.5
4,660,911	-		PFLU_RS20695	0.71	+1.7
4,660,911	-		PFLU_RS20695	0.71	+2.6
4,661,000	+		PFLU_RS20695	0.79	-2.0
4,661,000	+		PFLU_RS20695	0.79	+0.7
4,661,000	+		PFLU_RS20695	0.79	+0.2
4,661,145	+				+1.0
4,661,145	+				+0.8
4,661,146	-				+1.0
4,661,146	-				+2.7
4,661,146	-				+0.9
4,661,146	-				+0.2
4,661,146	-				+1.5
4,661,168	+				+3.1
4,661,168	+				-0.9
4,661,169	-				+1.5
4,661,169	-				+1.0
4,661,235	+				-1.3
4,661,235	+				-1.5
4,661,235	+				+2.0
4,661,235	+				-0.7
4,661,235	+				-1.8
4,661,235	+				+0.7
4,661,235	+				+2.0
4,661,235	+				-0.6
4,661,235	+				+0.4
4,661,236	-				-1.5
4,661,236	-				+0.5
4,661,236	-				-2.2
4,661,236	-				-0.7
4,661,236	-				-2.3
4,661,236	-				+2.7
4,661,304	+				+1.2
4,661,309	+				-0.9
4,661,309	+				-1.5
4,661,309	+				-0.2
4,661,309	+				+1.3
4,661,309	+				-0.5
4,661,309	+				-0.0
4,661,309	+				-1.2
4,661,309	+				+0.5
4,661,309	+				-0.3
4,661,309	+				-1.0
4,661,309	+				+0.8
4,661,309	+				-2.5
4,661,310	-				+0.4
4,661,310	-				+1.0
4,661,310	-				+0.7
4,661,310	-				+0.5
4,661,310	-				-1.6
4,661,310	-				-1.5
4,661,310	-				-0.7
4,661,310	-				-0.0
4,661,310	-				-0.7
4,661,310	-				+0.8
4,661,310	-				-1.2
4,661,310	-				+0.3
4,661,310	-				+1.9
4,661,310	-				+1.0
4,661,310	-				-0.9
4,661,310	-				+1.2
4,661,310	-				+1.5
4,661,310	-				-0.0
4,661,310	-				-1.5
4,661,310	-				-3.2
4,661,310	-				-1.4
4,661,310	-				-1.0
4,661,310	-				-0.5
4,661,310	-				-0.0
4,661,341	+				-0.3
4,661,341	+				+2.0
4,661,341	+				-1.2
4,661,341	+				-1.2
4,661,342	-				+3.4
4,661,357	+				-0.8
4,661,586	+		PFLU_RS20700	0.26	-2.5
4,661,586	+		PFLU_RS20700	0.26	+2.4
4,661,586	+		PFLU_RS20700	0.26	-0.7
4,661,586	+		PFLU_RS20700	0.26	-1.9
4,661,587	-		PFLU_RS20700	0.26	+0.1
4,661,587	-		PFLU_RS20700	0.26	+1.7
4,661,587	-		PFLU_RS20700	0.26	+2.9
4,661,587	-		PFLU_RS20700	0.26	+1.7
4,661,634	+		PFLU_RS20700	0.31	+2.1
4,661,634	+		PFLU_RS20700	0.31	-1.9
4,661,634	+		PFLU_RS20700	0.31	+3.7
4,661,634	+		PFLU_RS20700	0.31	-2.5
4,661,634	+		PFLU_RS20700	0.31	-2.0
4,661,634	+		PFLU_RS20700	0.31	-1.0
4,661,634	+		PFLU_RS20700	0.31	+3.1
4,661,634	+		PFLU_RS20700	0.31	+2.0
4,661,635	-		PFLU_RS20700	0.31	-0.2
4,661,635	-		PFLU_RS20700	0.31	-2.3
4,661,635	-		PFLU_RS20700	0.31	-0.6
4,661,635	-		PFLU_RS20700	0.31	+2.1
4,661,635	-		PFLU_RS20700	0.31	-1.2
4,661,635	-		PFLU_RS20700	0.31	+1.4
4,661,635	-		PFLU_RS20700	0.31	+1.4
4,661,638	+		PFLU_RS20700	0.31	+0.7
4,661,638	+		PFLU_RS20700	0.31	-0.5
4,661,638	+		PFLU_RS20700	0.31	+1.8
4,661,638	+		PFLU_RS20700	0.31	-1.9
4,661,639	-		PFLU_RS20700	0.32	+2.8
4,661,639	-		PFLU_RS20700	0.32	+1.6
4,661,639	-		PFLU_RS20700	0.32	+2.5
4,661,639	-		PFLU_RS20700	0.32	-0.0
4,661,700	+		PFLU_RS20700	0.38	-2.0
4,661,701	-		PFLU_RS20700	0.38	-0.3
4,661,701	-		PFLU_RS20700	0.38	+2.3
4,661,701	-		PFLU_RS20700	0.38	+1.3
4,661,813	+		PFLU_RS20700	0.50	+1.2
4,661,814	-		PFLU_RS20700	0.50	+2.2
4,661,904	+		PFLU_RS20700	0.60	-0.5
4,661,904	+		PFLU_RS20700	0.60	+0.7
4,661,904	+		PFLU_RS20700	0.60	+0.4
4,661,904	+		PFLU_RS20700	0.60	+3.0
4,661,904	+		PFLU_RS20700	0.60	+4.5
4,661,905	-		PFLU_RS20700	0.60	-0.5
4,661,905	-		PFLU_RS20700	0.60	+2.2
4,661,905	-		PFLU_RS20700	0.60	+0.4
4,661,905	-		PFLU_RS20700	0.60	+3.1
4,661,905	-		PFLU_RS20700	0.60	+1.5
4,661,952	-		PFLU_RS20700	0.65	-2.5
4,661,962	+		PFLU_RS20700	0.66	+1.9
4,662,030	+		PFLU_RS20700	0.74	+1.5
4,662,031	-		PFLU_RS20700	0.74	+2.4
4,662,066	+		PFLU_RS20700	0.77	+0.7
4,662,066	+		PFLU_RS20700	0.77	-0.2
4,662,066	+		PFLU_RS20700	0.77	+1.0
4,662,066	+		PFLU_RS20700	0.77	+3.1
4,662,066	+		PFLU_RS20700	0.77	+2.5
4,662,066	+		PFLU_RS20700	0.77	+1.7
4,662,067	-		PFLU_RS20700	0.78	-0.0
4,662,067	-		PFLU_RS20700	0.78	+2.0
4,662,067	-		PFLU_RS20700	0.78	+0.5
4,662,067	-		PFLU_RS20700	0.78	+1.6
4,662,067	-		PFLU_RS20700	0.78	+1.1
4,662,067	-		PFLU_RS20700	0.78	+1.4
4,662,129	+		PFLU_RS20700	0.84	-2.8
4,662,129	+		PFLU_RS20700	0.84	+0.9
4,662,193	-				+2.1
4,662,193	-				-1.0