Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS19375

Experiment: 4-Hydroxybenzoic Acid (C) and Ammonium chloride (N); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Hydroxybenzoic Acid (C) and Ammonium chloride (N); with MOPS
4,381,175	+		PFLU_RS19370	0.46	-2.1
4,381,175	+		PFLU_RS19370	0.46	+2.5
4,381,175	+		PFLU_RS19370	0.46	+0.8
4,381,175	+		PFLU_RS19370	0.46	+0.6
4,381,176	-		PFLU_RS19370	0.46	+0.2
4,381,281	+		PFLU_RS19370	0.53	+0.4
4,381,281	+		PFLU_RS19370	0.53	+0.3
4,381,282	-		PFLU_RS19370	0.53	-0.2
4,381,282	-		PFLU_RS19370	0.53	-0.6
4,381,282	-		PFLU_RS19370	0.53	-0.2
4,381,282	-		PFLU_RS19370	0.53	+0.9
4,381,282	-		PFLU_RS19370	0.53	-0.2
4,381,282	-		PFLU_RS19370	0.53	-0.7
4,381,282	-		PFLU_RS19370	0.53	-0.4
4,381,282	-		PFLU_RS19370	0.53	-2.1
4,381,282	-		PFLU_RS19370	0.53	-0.5
4,381,534	+		PFLU_RS19370	0.72	+0.3
4,381,535	-		PFLU_RS19370	0.72	-0.6
4,381,580	-		PFLU_RS19370	0.75	+0.4
4,381,580	-		PFLU_RS19370	0.75	-0.9
4,381,713	+		PFLU_RS19370	0.85	+0.8
4,382,022	+				+1.2
4,382,022	+				+0.9
4,382,022	+				-0.2
4,382,022	+				-0.2
4,382,023	-				-0.1
4,382,023	-				-0.6
4,382,023	-				+0.1
4,382,023	-				-1.2
4,382,075	+				-1.2
4,382,075	+				+1.4
4,382,075	+				+0.8
4,382,075	+				-1.2
4,382,075	+				+0.5
4,382,075	+				+1.4
4,382,075	+				-1.7
4,382,076	-				-2.6
4,382,076	-				-2.7
4,382,076	-				-1.8
4,382,076	-				-0.2
4,382,076	-				-1.8
4,382,076	-				-3.6
4,382,076	-				-2.5
4,382,118	+				-2.4
4,382,118	+				-2.2
4,382,119	-				-1.2
4,382,119	-				-3.3
4,382,119	-				-0.6
4,382,119	-				-1.2
4,382,119	-				-1.9
4,382,171	+				-2.2
4,382,171	+				-2.5
4,382,171	+				-2.3
4,382,171	+				-2.7
4,382,171	+				+0.4
4,382,172	-				-3.8
4,382,172	-				-0.6
4,382,172	-				-2.5
4,382,172	-				-0.2
4,382,172	-				-2.1
4,382,285	+		PFLU_RS19375	0.15	-2.9
4,382,285	+		PFLU_RS19375	0.15	-2.1
4,382,285	+		PFLU_RS19375	0.15	-2.9
4,382,286	-		PFLU_RS19375	0.15	-2.7
4,382,286	-		PFLU_RS19375	0.15	-3.1
4,382,286	-		PFLU_RS19375	0.15	-3.4
4,382,481	-		PFLU_RS19375	0.35	-3.2
4,382,501	+		PFLU_RS19375	0.36	-2.9
4,382,501	+		PFLU_RS19375	0.36	-2.9
4,382,501	+		PFLU_RS19375	0.36	-2.6
4,382,501	+		PFLU_RS19375	0.36	-0.9
4,382,502	-		PFLU_RS19375	0.37	-2.8
4,382,597	+		PFLU_RS19375	0.46	-0.6
4,382,597	+		PFLU_RS19375	0.46	-3.8
4,382,597	+		PFLU_RS19375	0.46	-0.6
4,382,597	+		PFLU_RS19375	0.46	-1.2
4,382,598	-		PFLU_RS19375	0.46	-1.4
4,382,617	-		PFLU_RS19375	0.48	-0.9
4,382,693	+		PFLU_RS19375	0.55	-1.4
4,382,693	+		PFLU_RS19375	0.55	-3.2
4,382,693	+		PFLU_RS19375	0.55	-1.6
4,382,693	+		PFLU_RS19375	0.55	-3.2
4,382,693	+		PFLU_RS19375	0.55	-1.6
4,382,693	+		PFLU_RS19375	0.55	-1.9
4,382,693	+		PFLU_RS19375	0.55	-1.8
4,382,694	-		PFLU_RS19375	0.55	-1.6
4,382,694	-		PFLU_RS19375	0.55	-0.2
4,382,694	-		PFLU_RS19375	0.55	-2.5
4,382,694	-		PFLU_RS19375	0.55	-2.7
4,382,694	-		PFLU_RS19375	0.55	-2.2
4,382,694	-		PFLU_RS19375	0.55	-4.2
4,382,753	+		PFLU_RS19375	0.61	-3.0
4,382,754	-		PFLU_RS19375	0.61	-2.1
4,382,754	-		PFLU_RS19375	0.61	-2.2
4,382,827	+		PFLU_RS19375	0.68	-2.5
4,382,827	+		PFLU_RS19375	0.68	-3.4
4,382,827	+		PFLU_RS19375	0.68	-2.2
4,382,827	+		PFLU_RS19375	0.68	-3.7
4,382,827	+		PFLU_RS19375	0.68	-3.1
4,382,827	+		PFLU_RS19375	0.68	-2.5
4,382,827	+		PFLU_RS19375	0.68	-3.1
4,382,827	+		PFLU_RS19375	0.68	-2.3
4,382,828	-		PFLU_RS19375	0.69	-3.1
4,382,828	-		PFLU_RS19375	0.69	-0.6
4,382,828	-		PFLU_RS19375	0.69	-1.3
4,382,828	-		PFLU_RS19375	0.69	-2.6
4,382,828	-		PFLU_RS19375	0.69	-2.4
4,382,828	-		PFLU_RS19375	0.69	-2.4
4,382,828	-		PFLU_RS19375	0.69	-3.0
4,382,981	-		PFLU_RS19375	0.84	-2.2
4,383,017	+		PFLU_RS19375	0.87	-2.4
4,383,017	+		PFLU_RS19375	0.87	-3.3
4,383,018	-		PFLU_RS19375	0.87	-2.9
4,383,018	-		PFLU_RS19375	0.87	-2.4
4,383,018	-		PFLU_RS19375	0.87	-2.2
4,383,018	-		PFLU_RS19375	0.87	-3.5
4,383,080	+				-3.7
4,383,081	-				-1.6
4,383,146	+				+1.0
4,383,146	+				+0.1
4,383,147	-				-0.4
4,383,147	-				-1.9
4,383,161	+				-0.4
4,383,162	-				+0.1
4,383,162	-				-0.2
4,383,162	-				-1.4
4,383,191	-				-1.2
4,383,191	-				+0.7
4,383,238	+				-0.6
4,383,262	+				-1.2
4,383,262	+				-0.2
4,383,286	-				+2.1
4,383,300	+				-0.3
4,383,389	+		PFLU_RS30920	0.19	+1.4
4,383,444	+		PFLU_RS30920	0.25	+0.7
4,383,444	+		PFLU_RS30920	0.25	-1.6
4,383,444	+		PFLU_RS30920	0.25	-1.6
4,383,444	+		PFLU_RS30920	0.25	-0.9
4,383,469	-		PFLU_RS30920	0.28	-0.2
4,383,469	-		PFLU_RS30920	0.28	-0.3
4,383,469	-		PFLU_RS30920	0.28	-1.1
4,383,547	+		PFLU_RS30920	0.36	+0.5
4,383,547	+		PFLU_RS30920	0.36	-0.6
4,383,572	-		PFLU_RS30920	0.39	-0.6
4,383,606	-		PFLU_RS30920	0.43	-1.2
4,383,606	-		PFLU_RS30920	0.43	+0.6
4,383,691	+		PFLU_RS30920	0.53	-0.9
4,383,691	+		PFLU_RS30920	0.53	-0.1
4,383,691	+		PFLU_RS30920	0.53	-1.2
4,383,691	+		PFLU_RS30920	0.53	+0.5
4,383,691	+		PFLU_RS30920	0.53	-0.0
4,383,691	+		PFLU_RS30920	0.53	+0.5
4,383,691	+		PFLU_RS30920	0.53	-0.2
4,383,691	+		PFLU_RS30920	0.53	-1.4
4,383,691	+		PFLU_RS30920	0.53	-0.3
4,383,691	+		PFLU_RS30920	0.53	-0.7
4,383,692	-		PFLU_RS30920	0.53	-2.0
4,383,692	-		PFLU_RS30920	0.53	-1.9
4,383,692	-		PFLU_RS30920	0.53	+0.4
4,383,692	-		PFLU_RS30920	0.53	+0.4
4,383,692	-		PFLU_RS30920	0.53	+1.0
4,383,709	-		PFLU_RS30920	0.55	+0.3
4,383,709	-		PFLU_RS30920	0.55	-0.2
4,383,724	+		PFLU_RS30920	0.56	+0.4
4,383,724	+		PFLU_RS30920	0.56	+1.1
4,383,724	+		PFLU_RS30920	0.56	-2.2
4,383,725	-		PFLU_RS30920	0.56	+0.5
4,383,725	-		PFLU_RS30920	0.56	+3.5
4,383,725	-		PFLU_RS30920	0.56	+1.7
4,383,725	-		PFLU_RS30920	0.56	+0.1
4,383,744	+		PFLU_RS30920	0.59	+0.5
4,383,745	-		PFLU_RS30920	0.59	+0.5
4,383,745	-		PFLU_RS30920	0.59	-0.2
4,383,745	-		PFLU_RS30920	0.59	-1.9
4,383,745	-		PFLU_RS30920	0.59	+0.4
4,383,988	+		PFLU_RS30920	0.86	-0.5
4,383,988	+		PFLU_RS30920	0.86	+0.5
4,383,989	-		PFLU_RS30920	0.86	+0.5
4,383,989	-		PFLU_RS30920	0.86	+0.1
4,383,989	-		PFLU_RS30920	0.86	-1.9
4,383,989	-		PFLU_RS30920	0.86	+0.7
4,384,033	+				-0.0
4,384,033	+				-2.6
4,384,033	+				+1.9
4,384,033	+				-0.9
4,384,033	+				-1.4
4,384,033	+				+0.8
4,384,033	+				-1.2
4,384,034	-				+2.5
4,384,034	-				+0.5
4,384,034	-				+0.5
4,384,096	+				-2.2
4,384,097	-				-2.1
4,384,109	-				+0.4