Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS18955

Experiment: 4-Hydroxybenzoic Acid (C) and Ammonium chloride (N); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Hydroxybenzoic Acid (C) and Ammonium chloride (N); with MOPS
4,285,971	+		PFLU_RS18945	0.61	-0.9
4,285,971	+		PFLU_RS18945	0.61	-0.4
4,285,971	+		PFLU_RS18945	0.61	+1.4
4,285,971	+		PFLU_RS18945	0.61	-0.9
4,285,971	+		PFLU_RS18945	0.61	+1.0
4,285,971	+		PFLU_RS18945	0.61	-0.4
4,285,972	-		PFLU_RS18945	0.61	-0.1
4,285,988	+		PFLU_RS18945	0.63	+0.8
4,285,989	-		PFLU_RS18945	0.63	+0.5
4,285,989	-		PFLU_RS18945	0.63	-1.3
4,285,994	+		PFLU_RS18945	0.64	-1.4
4,285,994	+		PFLU_RS18945	0.64	+1.2
4,285,994	+		PFLU_RS18945	0.64	-0.3
4,285,995	-		PFLU_RS18945	0.64	-1.2
4,285,995	-		PFLU_RS18945	0.64	+1.4
4,285,995	-		PFLU_RS18945	0.64	+0.8
4,285,995	-		PFLU_RS18945	0.64	-1.2
4,285,995	-		PFLU_RS18945	0.64	+0.3
4,285,995	-		PFLU_RS18945	0.64	-0.7
4,285,995	-		PFLU_RS18945	0.64	-0.1
4,286,085	+		PFLU_RS18945	0.73	-0.5
4,286,085	+		PFLU_RS18945	0.73	-2.5
4,286,085	+		PFLU_RS18945	0.73	+0.2
4,286,085	+		PFLU_RS18945	0.73	-1.6
4,286,086	-		PFLU_RS18945	0.74	-2.3
4,286,086	-		PFLU_RS18945	0.74	+0.4
4,286,086	-		PFLU_RS18945	0.74	-1.3
4,286,086	-		PFLU_RS18945	0.74	-0.9
4,286,086	-		PFLU_RS18945	0.74	-0.6
4,286,086	-		PFLU_RS18945	0.74	-0.6
4,286,086	-		PFLU_RS18945	0.74	-2.2
4,286,086	-		PFLU_RS18945	0.74	-0.6
4,286,217	+		PFLU_RS18945	0.88	-1.5
4,286,217	+		PFLU_RS18945	0.88	+0.8
4,286,218	-		PFLU_RS18945	0.88	-0.2
4,286,218	-		PFLU_RS18945	0.88	+1.8
4,286,332	-				-1.0
4,286,332	-				+0.8
4,286,339	-				+0.6
4,286,339	-				-1.1
4,286,339	-				+0.3
4,286,339	-				-0.3
4,286,339	-				-2.5
4,286,379	+				+0.5
4,286,405	+				-1.4
4,286,406	-				+1.4
4,286,406	-				+0.5
4,286,406	-				+0.8
4,286,466	+				+0.0
4,286,466	+				+0.2
4,286,466	+				+1.6
4,286,466	+				-1.0
4,286,466	+				-0.6
4,286,466	+				+0.8
4,286,466	+				+0.5
4,286,466	+				+1.3
4,286,506	+				-0.9
4,286,506	+				+0.2
4,286,506	+				-1.4
4,286,506	+				-2.4
4,286,507	-				+0.6
4,286,507	-				-0.6
4,286,507	-				-1.8
4,286,507	-				+0.5
4,286,507	-				+1.4
4,286,511	+				+1.2
4,286,511	+				+1.2
4,286,538	+				+0.2
4,286,538	+				+0.8
4,286,538	+				-1.4
4,286,538	+				+0.4
4,286,538	+				+1.3
4,286,539	-				-0.4
4,286,539	-				+0.3
4,286,539	-				-0.6
4,286,539	-				-2.1
4,286,554	+				+0.7
4,286,554	+				-0.4
4,286,554	+				+1.4
4,286,554	+				+0.4
4,286,555	-				+0.6
4,286,555	-				+1.0
4,286,555	-				-1.3
4,286,555	-				+0.6
4,286,611	+		PFLU_RS18950	0.18	+0.2
4,286,611	+		PFLU_RS18950	0.18	+1.2
4,286,612	-		PFLU_RS18950	0.18	+3.7
4,286,612	-		PFLU_RS18950	0.18	-0.3
4,286,612	-		PFLU_RS18950	0.18	+0.4
4,286,612	-		PFLU_RS18950	0.18	-0.6
4,286,658	+		PFLU_RS18950	0.30	+1.9
4,286,658	+		PFLU_RS18950	0.30	+1.9
4,286,658	+		PFLU_RS18950	0.30	-0.2
4,286,659	-		PFLU_RS18950	0.30	+1.2
4,286,659	-		PFLU_RS18950	0.30	+1.8
4,286,659	-		PFLU_RS18950	0.30	-0.2
4,286,659	-		PFLU_RS18950	0.30	+1.3
4,286,662	+		PFLU_RS18950	0.31	-1.0
4,286,662	+		PFLU_RS18950	0.31	-1.1
4,286,662	+		PFLU_RS18950	0.31	-0.7
4,286,662	+		PFLU_RS18950	0.31	-0.2
4,286,663	-		PFLU_RS18950	0.31	+0.6
4,286,663	-		PFLU_RS18950	0.31	+0.4
4,286,663	-		PFLU_RS18950	0.31	+2.4
4,286,663	-		PFLU_RS18950	0.31	+0.9
4,286,755	+		PFLU_RS18950	0.54	+0.2
4,286,756	-		PFLU_RS18950	0.54	+1.1
4,286,756	-		PFLU_RS18950	0.54	+1.2
4,286,756	-		PFLU_RS18950	0.54	-1.2
4,286,943	+				-3.4
4,286,943	+				+0.7
4,286,943	+				-0.8
4,286,944	-				+0.4
4,286,944	-				+0.2
4,286,970	+				-0.9
4,286,970	+				-1.4
4,286,970	+				+0.4
4,286,970	+				-1.8
4,286,970	+				+0.4
4,286,970	+				+1.4
4,286,970	+				-1.6
4,286,970	+				-0.6
4,286,970	+				-1.2
4,286,970	+				-2.2
4,286,971	-				-1.8
4,286,971	-				-1.2
4,286,971	-				-0.6
4,286,971	-				+2.1
4,286,971	-				-1.2
4,286,971	-				-1.2
4,286,971	-				-0.2
4,286,971	-				-0.4
4,286,971	-				+1.4
4,286,971	-				+2.4
4,287,022	+				-0.6
4,287,022	+				-2.2
4,287,022	+				-0.2
4,287,023	-				-0.9
4,287,023	-				-0.6
4,287,080	+		PFLU_RS18955	0.14	+0.9
4,287,080	+		PFLU_RS18955	0.14	-0.2
4,287,080	+		PFLU_RS18955	0.14	+0.4
4,287,080	+		PFLU_RS18955	0.14	+1.9
4,287,080	+		PFLU_RS18955	0.14	-1.2
4,287,080	+		PFLU_RS18955	0.14	+1.4
4,287,080	+		PFLU_RS18955	0.14	+0.4
4,287,080	+		PFLU_RS18955	0.14	-0.3
4,287,080	+		PFLU_RS18955	0.14	-0.6
4,287,080	+		PFLU_RS18955	0.14	-0.2
4,287,080	+		PFLU_RS18955	0.14	-0.2
4,287,081	-		PFLU_RS18955	0.14	+1.4
4,287,081	-		PFLU_RS18955	0.14	-0.9
4,287,081	-		PFLU_RS18955	0.14	-1.8
4,287,081	-		PFLU_RS18955	0.14	-1.6
4,287,081	-		PFLU_RS18955	0.14	+3.0
4,287,081	-		PFLU_RS18955	0.14	-0.8
4,287,083	-		PFLU_RS18955	0.15	-1.2
4,287,083	-		PFLU_RS18955	0.15	-0.6
4,287,145	-		PFLU_RS18955	0.22	+0.2
4,287,145	-		PFLU_RS18955	0.22	-2.3
4,287,145	-		PFLU_RS18955	0.22	-0.6
4,287,179	+		PFLU_RS18955	0.25	-0.9
4,287,179	+		PFLU_RS18955	0.25	+0.8
4,287,179	+		PFLU_RS18955	0.25	-2.7
4,287,179	+		PFLU_RS18955	0.25	-1.2
4,287,179	+		PFLU_RS18955	0.25	-1.6
4,287,179	+		PFLU_RS18955	0.25	+0.8
4,287,180	-		PFLU_RS18955	0.25	-1.9
4,287,180	-		PFLU_RS18955	0.25	+0.1
4,287,180	-		PFLU_RS18955	0.25	+1.8
4,287,180	-		PFLU_RS18955	0.25	-1.2
4,287,180	-		PFLU_RS18955	0.25	-0.2
4,287,180	-		PFLU_RS18955	0.25	+1.0
4,287,180	-		PFLU_RS18955	0.25	-1.8
4,287,180	-		PFLU_RS18955	0.25	-0.2
4,287,286	+		PFLU_RS18955	0.37	-0.9
4,287,286	+		PFLU_RS18955	0.37	-0.4
4,287,287	-		PFLU_RS18955	0.37	-1.4
4,287,287	-		PFLU_RS18955	0.37	-1.4
4,287,371	+		PFLU_RS18955	0.47	+0.8
4,287,371	+		PFLU_RS18955	0.47	-0.2
4,287,372	-		PFLU_RS18955	0.47	-2.4
4,287,372	-		PFLU_RS18955	0.47	-0.4
4,287,372	-		PFLU_RS18955	0.47	-0.2
4,287,372	-		PFLU_RS18955	0.47	-0.9
4,287,372	-		PFLU_RS18955	0.47	+2.2
4,287,372	-		PFLU_RS18955	0.47	+2.0
4,287,449	+		PFLU_RS18955	0.55	-1.3
4,287,449	+		PFLU_RS18955	0.55	-0.6
4,287,449	+		PFLU_RS18955	0.55	+1.4
4,287,449	+		PFLU_RS18955	0.55	-1.4
4,287,449	+		PFLU_RS18955	0.55	+0.4
4,287,450	-		PFLU_RS18955	0.55	-1.4
4,287,450	-		PFLU_RS18955	0.55	+1.8
4,287,450	-		PFLU_RS18955	0.55	-1.2
4,287,450	-		PFLU_RS18955	0.55	-1.4
4,287,450	-		PFLU_RS18955	0.55	+0.4
4,287,450	-		PFLU_RS18955	0.55	+0.4
4,287,450	-		PFLU_RS18955	0.55	+0.4
4,287,450	-		PFLU_RS18955	0.55	+1.4
4,287,450	-		PFLU_RS18955	0.55	-1.4
4,287,450	-		PFLU_RS18955	0.55	-0.6
4,287,450	-		PFLU_RS18955	0.55	+1.4
4,287,464	+		PFLU_RS18955	0.57	-1.8
4,287,464	+		PFLU_RS18955	0.57	-2.0
4,287,465	-		PFLU_RS18955	0.57	+1.7
4,287,465	-		PFLU_RS18955	0.57	-0.9
4,287,465	-		PFLU_RS18955	0.57	+0.8
4,287,465	-		PFLU_RS18955	0.57	-2.2
4,287,465	-		PFLU_RS18955	0.57	-1.6
4,287,581	-		PFLU_RS18955	0.70	-0.9
4,287,581	-		PFLU_RS18955	0.70	-3.0
4,287,581	-		PFLU_RS18955	0.70	-2.4
4,287,581	-		PFLU_RS18955	0.70	-0.6
4,287,584	+		PFLU_RS18955	0.70	+0.3
4,287,584	+		PFLU_RS18955	0.70	-1.2
4,287,584	+		PFLU_RS18955	0.70	+0.4
4,287,584	+		PFLU_RS18955	0.70	-0.2
4,287,584	+		PFLU_RS18955	0.70	-1.6
4,287,584	+		PFLU_RS18955	0.70	-0.2
4,287,584	+		PFLU_RS18955	0.70	-1.2
4,287,584	+		PFLU_RS18955	0.70	+0.8
4,287,584	+		PFLU_RS18955	0.70	+0.1
4,287,584	+		PFLU_RS18955	0.70	-0.9
4,287,584	+		PFLU_RS18955	0.70	-1.2
4,287,585	-		PFLU_RS18955	0.70	-1.4
4,287,585	-		PFLU_RS18955	0.70	+1.5
4,287,585	-		PFLU_RS18955	0.70	+0.3
4,287,585	-		PFLU_RS18955	0.70	-1.8
4,287,585	-		PFLU_RS18955	0.70	+0.4
4,287,585	-		PFLU_RS18955	0.70	-0.0
4,287,585	-		PFLU_RS18955	0.70	-0.2
4,287,585	-		PFLU_RS18955	0.70	-0.9
4,287,585	-		PFLU_RS18955	0.70	-0.5
4,287,585	-		PFLU_RS18955	0.70	-1.0
4,287,585	-		PFLU_RS18955	0.70	-2.1
4,287,585	-		PFLU_RS18955	0.70	+1.4
4,287,585	-		PFLU_RS18955	0.70	-1.9
4,287,585	-		PFLU_RS18955	0.70	+0.2
4,287,585	-		PFLU_RS18955	0.70	-2.6
4,287,604	+		PFLU_RS18955	0.73	+0.4
4,287,604	+		PFLU_RS18955	0.73	-0.0
4,287,608	+		PFLU_RS18955	0.73	-1.0
4,287,608	+		PFLU_RS18955	0.73	-1.6
4,287,608	+		PFLU_RS18955	0.73	+1.4
4,287,609	-		PFLU_RS18955	0.73	+0.2
4,287,609	-		PFLU_RS18955	0.73	+3.6
4,287,649	+		PFLU_RS18955	0.78	+1.6
4,287,674	+		PFLU_RS18955	0.80	-0.6
4,287,719	+		PFLU_RS18955	0.85	-1.4
4,287,719	+		PFLU_RS18955	0.85	+0.4
4,287,720	-		PFLU_RS18955	0.85	+1.4
4,287,852	+				-0.8
4,287,853	-				-1.6
4,287,886	-				-3.3
4,287,886	-				-0.8
4,287,909	+				-0.0
4,287,909	+				-1.6
4,287,909	+				-0.4
4,287,909	+				-0.2
4,287,909	+				-0.5
4,287,909	+				+0.5
4,287,909	+				-1.0
4,287,909	+				-0.9
4,287,909	+				-1.6
4,287,910	-				-1.4
4,287,910	-				-2.6
4,287,910	-				+1.0
4,287,910	-				-0.2
4,287,910	-				+0.4
4,287,910	-				+0.6
4,287,910	-				-0.4
4,287,910	-				-1.3
4,287,910	-				-2.4
4,287,910	-				+0.4
4,287,910	-				-0.6
4,287,919	+				-1.3
4,287,919	+				-0.4
4,287,919	+				-1.2
4,287,920	-				-1.0
4,287,999	-				-1.1
4,287,999	-				-2.2
4,288,011	+				+0.2
4,288,012	-				-2.0
4,288,020	+				-0.9
4,288,037	-				-0.4
4,288,037	-				-2.3
4,288,066	+				-0.2
4,288,066	+				+0.4
4,288,066	+				-1.3
4,288,066	+				-1.0
4,288,066	+				-0.6
4,288,066	+				+1.4
4,288,067	-				+2.2
4,288,095	+				-0.4
4,288,096	-				+1.1
4,288,096	-				-1.4
4,288,132	-				+1.6
4,288,132	-				-0.6
4,288,169	-				-1.4
4,288,174	+				+1.4
4,288,174	+				+0.4
4,288,174	+				-1.8
4,288,174	+				+0.2
4,288,174	+				-0.2
4,288,174	+				+0.4
4,288,175	-				-1.2
4,288,175	-				-1.2
4,288,175	-				-0.8
4,288,175	-				-1.8
4,288,175	-				-1.4
4,288,175	-				-3.7
4,288,183	+				+2.2
4,288,183	+				-2.4
4,288,183	+				-0.2
4,288,183	+				-0.1
4,288,183	+				-0.8
4,288,183	+				+0.6
4,288,183	+				-1.8
4,288,183	+				-0.9
4,288,183	+				-0.4
4,288,183	+				-0.3
4,288,184	-				-0.9
4,288,184	-				-0.0
4,288,184	-				-0.9
4,288,184	-				-1.4
4,288,184	-				-0.3
4,288,184	-				-2.8
4,288,184	-				-2.7
4,288,187	+				+0.1
4,288,187	+				-3.2
4,288,281	+				+0.4
4,288,310	+				+0.6
4,288,310	+				-2.7
4,288,310	+				-1.7
4,288,310	+				-1.8
4,288,310	+				+0.5
4,288,310	+				+2.8
4,288,310	+				-2.8
4,288,310	+				-0.6
4,288,310	+				+0.6
4,288,310	+				+0.4
4,288,311	-				+1.0
4,288,311	-				-1.8
4,288,311	-				-0.2
4,288,311	-				+1.4
4,288,311	-				+1.4
4,288,311	-				+1.7
4,288,311	-				+1.2
4,288,311	-				-1.8
4,288,311	-				+3.0
4,288,311	-				-2.5
4,288,311	-				+0.6
4,288,325	+				-2.4
4,288,325	+				-2.0
4,288,326	-				+0.4
4,288,326	-				-1.2
4,288,326	-				-1.8
4,288,326	-				-1.8
4,288,328	+				+0.1
4,288,328	+				-0.6
4,288,329	-				-1.9
4,288,354	+				-0.9
4,288,355	-				-0.6
4,288,465	+				-2.3
4,288,567	+				+1.2
4,288,567	+				-1.6
4,288,567	+				-2.0
4,288,567	+				+1.6
4,288,567	+				-0.6
4,288,567	+				+1.1
4,288,567	+				+0.6
4,288,567	+				+0.7
4,288,568	-				+0.8
4,288,568	-				-0.1
4,288,568	-				-0.1
4,288,568	-				-2.3
4,288,679	-		PFLU_RS18960	0.13	-0.2
4,288,759	+		PFLU_RS18960	0.18	+1.0
4,288,816	+		PFLU_RS18960	0.21	-0.2
4,288,816	+		PFLU_RS18960	0.21	-1.2
4,288,817	-		PFLU_RS18960	0.22	+0.3
4,288,817	-		PFLU_RS18960	0.22	-1.2
4,288,817	-		PFLU_RS18960	0.22	-0.8