Experiment: 4-Hydroxybenzoic Acid (C) and Ammonium chloride (N); with MOPS
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS14765 and PFLU_RS14770 are separated by 9 nucleotides PFLU_RS14770 and PFLU_RS14775 are separated by 11 nucleotides PFLU_RS14775 and PFLU_RS14780 are separated by 95 nucleotides
PFLU_RS14765: PFLU_RS14765 - acetyl-CoA C-acyltransferase, at 3,302,770 to 3,303,954
_RS14765
PFLU_RS14770: PFLU_RS14770 - acyl-CoA dehydrogenase, at 3,303,964 to 3,305,091
_RS14770
PFLU_RS14775: PFLU_RS14775 - enoyl-CoA hydratase, at 3,305,103 to 3,305,876
_RS14775
PFLU_RS14780: PFLU_RS14780 - acyl-CoA dehydrogenase, at 3,305,972 to 3,307,120
_RS14780
Position (kb) 3303
3304
3305
3306 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 3303.139 kb on + strand, within PFLU_RS14765 at 3303.139 kb on + strand, within PFLU_RS14765 at 3303.139 kb on + strand, within PFLU_RS14765 at 3303.139 kb on + strand, within PFLU_RS14765 at 3303.139 kb on + strand, within PFLU_RS14765 at 3303.139 kb on + strand, within PFLU_RS14765 at 3303.139 kb on + strand, within PFLU_RS14765 at 3303.140 kb on - strand, within PFLU_RS14765 at 3303.140 kb on - strand, within PFLU_RS14765 at 3303.140 kb on - strand, within PFLU_RS14765 at 3303.140 kb on - strand, within PFLU_RS14765 at 3303.140 kb on - strand, within PFLU_RS14765 at 3303.198 kb on + strand, within PFLU_RS14765 at 3303.198 kb on + strand, within PFLU_RS14765 at 3303.198 kb on + strand, within PFLU_RS14765 at 3303.198 kb on + strand, within PFLU_RS14765 at 3303.198 kb on + strand, within PFLU_RS14765 at 3303.198 kb on + strand, within PFLU_RS14765 at 3303.198 kb on + strand, within PFLU_RS14765 at 3303.198 kb on + strand, within PFLU_RS14765 at 3303.198 kb on + strand, within PFLU_RS14765 at 3303.198 kb on + strand, within PFLU_RS14765 at 3303.198 kb on + strand, within PFLU_RS14765 at 3303.198 kb on + strand, within PFLU_RS14765 at 3303.198 kb on + strand, within PFLU_RS14765 at 3303.198 kb on + strand, within PFLU_RS14765 at 3303.198 kb on + strand, within PFLU_RS14765 at 3303.198 kb on + strand, within PFLU_RS14765 at 3303.198 kb on + strand, within PFLU_RS14765 at 3303.198 kb on + strand, within PFLU_RS14765 at 3303.198 kb on + strand, within PFLU_RS14765 at 3303.198 kb on + strand, within PFLU_RS14765 at 3303.198 kb on + strand, within PFLU_RS14765 at 3303.198 kb on + strand, within PFLU_RS14765 at 3303.198 kb on + strand, within PFLU_RS14765 at 3303.198 kb on + strand, within PFLU_RS14765 at 3303.198 kb on + strand, within PFLU_RS14765 at 3303.198 kb on + strand, within PFLU_RS14765 at 3303.198 kb on + strand, within PFLU_RS14765 at 3303.198 kb on + strand, within PFLU_RS14765 at 3303.198 kb on + strand, within PFLU_RS14765 at 3303.198 kb on + strand, within PFLU_RS14765 at 3303.198 kb on + strand, within PFLU_RS14765 at 3303.198 kb on + strand, within PFLU_RS14765 at 3303.198 kb on + strand, within PFLU_RS14765 at 3303.198 kb on + strand, within PFLU_RS14765 at 3303.199 kb on - strand, within PFLU_RS14765 at 3303.199 kb on - strand, within PFLU_RS14765 at 3303.199 kb on - strand, within PFLU_RS14765 at 3303.199 kb on - strand, within PFLU_RS14765 at 3303.199 kb on - strand, within PFLU_RS14765 at 3303.199 kb on - strand, within PFLU_RS14765 at 3303.199 kb on - strand, within PFLU_RS14765 at 3303.199 kb on - strand, within PFLU_RS14765 at 3303.199 kb on - strand, within PFLU_RS14765 at 3303.199 kb on - strand, within PFLU_RS14765 at 3303.199 kb on - strand, within PFLU_RS14765 at 3303.199 kb on - strand, within PFLU_RS14765 at 3303.199 kb on - strand, within PFLU_RS14765 at 3303.199 kb on - strand, within PFLU_RS14765 at 3303.199 kb on - strand, within PFLU_RS14765 at 3303.199 kb on - strand, within PFLU_RS14765 at 3303.199 kb on - strand, within PFLU_RS14765 at 3303.199 kb on - strand, within PFLU_RS14765 at 3303.199 kb on - strand, within PFLU_RS14765 at 3303.199 kb on - strand, within PFLU_RS14765 at 3303.199 kb on - strand, within PFLU_RS14765 at 3303.199 kb on - strand, within PFLU_RS14765 at 3303.199 kb on - strand, within PFLU_RS14765 at 3303.199 kb on - strand, within PFLU_RS14765 at 3303.199 kb on - strand, within PFLU_RS14765 at 3303.199 kb on - strand, within PFLU_RS14765 at 3303.199 kb on - strand, within PFLU_RS14765 at 3303.199 kb on - strand, within PFLU_RS14765 at 3303.199 kb on - strand, within PFLU_RS14765 at 3303.226 kb on + strand, within PFLU_RS14765 at 3303.226 kb on + strand, within PFLU_RS14765 at 3303.226 kb on + strand, within PFLU_RS14765 at 3303.226 kb on + strand, within PFLU_RS14765 at 3303.227 kb on - strand, within PFLU_RS14765 at 3303.346 kb on - strand, within PFLU_RS14765 at 3303.949 kb on + strand at 3303.949 kb on + strand at 3303.949 kb on + strand at 3303.949 kb on + strand at 3303.950 kb on - strand at 3303.950 kb on - strand at 3303.950 kb on - strand at 3303.950 kb on - strand at 3303.950 kb on - strand at 3303.952 kb on + strand at 3303.952 kb on + strand at 3303.952 kb on + strand at 3303.952 kb on + strand at 3303.952 kb on + strand at 3303.952 kb on + strand at 3303.952 kb on + strand at 3303.953 kb on - strand at 3303.953 kb on - strand at 3303.953 kb on - strand at 3303.953 kb on - strand at 3303.953 kb on - strand at 3303.953 kb on - strand at 3304.162 kb on + strand, within PFLU_RS14770 at 3304.163 kb on - strand, within PFLU_RS14770 at 3304.163 kb on - strand, within PFLU_RS14770 at 3304.399 kb on + strand, within PFLU_RS14770 at 3304.399 kb on + strand, within PFLU_RS14770 at 3304.399 kb on + strand, within PFLU_RS14770 at 3304.399 kb on + strand, within PFLU_RS14770 at 3304.399 kb on + strand, within PFLU_RS14770 at 3304.399 kb on + strand, within PFLU_RS14770 at 3304.400 kb on - strand, within PFLU_RS14770 at 3304.400 kb on - strand, within PFLU_RS14770 at 3304.400 kb on - strand, within PFLU_RS14770 at 3304.400 kb on - strand, within PFLU_RS14770 at 3304.400 kb on - strand, within PFLU_RS14770 at 3304.509 kb on + strand, within PFLU_RS14770 at 3304.509 kb on + strand, within PFLU_RS14770 at 3304.509 kb on + strand, within PFLU_RS14770 at 3304.510 kb on - strand, within PFLU_RS14770 at 3304.534 kb on + strand, within PFLU_RS14770 at 3304.534 kb on + strand, within PFLU_RS14770 at 3304.581 kb on + strand, within PFLU_RS14770 at 3304.582 kb on - strand, within PFLU_RS14770 at 3304.582 kb on - strand, within PFLU_RS14770 at 3304.651 kb on + strand, within PFLU_RS14770 at 3304.651 kb on + strand, within PFLU_RS14770 at 3304.859 kb on - strand, within PFLU_RS14770 at 3305.015 kb on - strand at 3305.041 kb on + strand at 3305.041 kb on + strand at 3305.041 kb on + strand at 3305.042 kb on - strand at 3305.042 kb on - strand at 3305.042 kb on - strand at 3305.089 kb on + strand at 3305.090 kb on - strand at 3305.090 kb on - strand at 3305.100 kb on + strand at 3305.100 kb on + strand at 3305.100 kb on + strand at 3305.100 kb on + strand at 3305.100 kb on + strand at 3305.101 kb on - strand at 3305.101 kb on - strand at 3305.101 kb on - strand at 3305.101 kb on - strand at 3305.101 kb on - strand at 3305.109 kb on + strand at 3305.110 kb on - strand at 3305.110 kb on - strand at 3305.110 kb on - strand at 3305.337 kb on + strand, within PFLU_RS14775 at 3305.337 kb on + strand, within PFLU_RS14775 at 3305.338 kb on - strand, within PFLU_RS14775 at 3305.870 kb on + strand at 3305.870 kb on + strand at 3305.870 kb on + strand at 3305.870 kb on + strand at 3305.871 kb on - strand at 3305.871 kb on - strand at 3305.871 kb on - strand at 3305.871 kb on - strand at 3305.874 kb on + strand at 3305.874 kb on + strand at 3305.875 kb on - strand at 3305.875 kb on - strand at 3305.940 kb on - strand at 3305.940 kb on - strand at 3305.956 kb on - strand at 3305.956 kb on - strand at 3305.956 kb on - strand at 3305.956 kb on - strand at 3305.961 kb on - strand at 3305.973 kb on + strand at 3305.979 kb on + strand at 3305.979 kb on + strand at 3305.979 kb on + strand at 3305.980 kb on - strand at 3306.033 kb on + strand at 3306.033 kb on + strand at 3306.033 kb on + strand at 3306.063 kb on + strand at 3306.064 kb on - strand at 3306.064 kb on - strand at 3306.079 kb on - strand at 3306.090 kb on + strand, within PFLU_RS14780 at 3306.090 kb on + strand, within PFLU_RS14780 at 3306.090 kb on + strand, within PFLU_RS14780
Per-strain Table
Position Strand Gene LocusTag Fraction 4-Hydroxybenzoic Acid (C) and Ammonium chloride (N); with MOPS remove 3,303,139 + PFLU_RS14765 0.31 +1.0 3,303,139 + PFLU_RS14765 0.31 +0.6 3,303,139 + PFLU_RS14765 0.31 +1.7 3,303,139 + PFLU_RS14765 0.31 +1.1 3,303,139 + PFLU_RS14765 0.31 +1.8 3,303,139 + PFLU_RS14765 0.31 +2.3 3,303,139 + PFLU_RS14765 0.31 -0.3 3,303,140 - PFLU_RS14765 0.31 +0.9 3,303,140 - PFLU_RS14765 0.31 -0.7 3,303,140 - PFLU_RS14765 0.31 +0.8 3,303,140 - PFLU_RS14765 0.31 +1.3 3,303,140 - PFLU_RS14765 0.31 -0.8 3,303,198 + PFLU_RS14765 0.36 +0.4 3,303,198 + PFLU_RS14765 0.36 -1.6 3,303,198 + PFLU_RS14765 0.36 -0.7 3,303,198 + PFLU_RS14765 0.36 -3.2 3,303,198 + PFLU_RS14765 0.36 -1.9 3,303,198 + PFLU_RS14765 0.36 -1.1 3,303,198 + PFLU_RS14765 0.36 -3.1 3,303,198 + PFLU_RS14765 0.36 -1.1 3,303,198 + PFLU_RS14765 0.36 +0.8 3,303,198 + PFLU_RS14765 0.36 +0.4 3,303,198 + PFLU_RS14765 0.36 +0.4 3,303,198 + PFLU_RS14765 0.36 +0.3 3,303,198 + PFLU_RS14765 0.36 -1.5 3,303,198 + PFLU_RS14765 0.36 +2.4 3,303,198 + PFLU_RS14765 0.36 +0.6 3,303,198 + PFLU_RS14765 0.36 -0.9 3,303,198 + PFLU_RS14765 0.36 -1.2 3,303,198 + PFLU_RS14765 0.36 +1.0 3,303,198 + PFLU_RS14765 0.36 -0.0 3,303,198 + PFLU_RS14765 0.36 +1.9 3,303,198 + PFLU_RS14765 0.36 -1.2 3,303,198 + PFLU_RS14765 0.36 -3.0 3,303,198 + PFLU_RS14765 0.36 -0.4 3,303,198 + PFLU_RS14765 0.36 -2.4 3,303,198 + PFLU_RS14765 0.36 -0.0 3,303,198 + PFLU_RS14765 0.36 -2.9 3,303,198 + PFLU_RS14765 0.36 -1.2 3,303,198 + PFLU_RS14765 0.36 -0.8 3,303,198 + PFLU_RS14765 0.36 -0.8 3,303,198 + PFLU_RS14765 0.36 +0.7 3,303,198 + PFLU_RS14765 0.36 -0.5 3,303,198 + PFLU_RS14765 0.36 -0.5 3,303,198 + PFLU_RS14765 0.36 +1.1 3,303,198 + PFLU_RS14765 0.36 +0.7 3,303,199 - PFLU_RS14765 0.36 -1.9 3,303,199 - PFLU_RS14765 0.36 -1.5 3,303,199 - PFLU_RS14765 0.36 +0.3 3,303,199 - PFLU_RS14765 0.36 +0.3 3,303,199 - PFLU_RS14765 0.36 -0.2 3,303,199 - PFLU_RS14765 0.36 -2.4 3,303,199 - PFLU_RS14765 0.36 +1.1 3,303,199 - PFLU_RS14765 0.36 +0.3 3,303,199 - PFLU_RS14765 0.36 +3.0 3,303,199 - PFLU_RS14765 0.36 +0.1 3,303,199 - PFLU_RS14765 0.36 -2.1 3,303,199 - PFLU_RS14765 0.36 +0.1 3,303,199 - PFLU_RS14765 0.36 +0.4 3,303,199 - PFLU_RS14765 0.36 -1.2 3,303,199 - PFLU_RS14765 0.36 +0.6 3,303,199 - PFLU_RS14765 0.36 +0.2 3,303,199 - PFLU_RS14765 0.36 -3.1 3,303,199 - PFLU_RS14765 0.36 -1.5 3,303,199 - PFLU_RS14765 0.36 -2.1 3,303,199 - PFLU_RS14765 0.36 +0.6 3,303,199 - PFLU_RS14765 0.36 +0.1 3,303,199 - PFLU_RS14765 0.36 +0.1 3,303,199 - PFLU_RS14765 0.36 +0.1 3,303,199 - PFLU_RS14765 0.36 +1.9 3,303,199 - PFLU_RS14765 0.36 -1.6 3,303,199 - PFLU_RS14765 0.36 +0.0 3,303,199 - PFLU_RS14765 0.36 +1.1 3,303,199 - PFLU_RS14765 0.36 -0.6 3,303,199 - PFLU_RS14765 0.36 +1.4 3,303,226 + PFLU_RS14765 0.38 -0.7 3,303,226 + PFLU_RS14765 0.38 +0.5 3,303,226 + PFLU_RS14765 0.38 -1.4 3,303,226 + PFLU_RS14765 0.38 -0.3 3,303,227 - PFLU_RS14765 0.39 -0.5 3,303,346 - PFLU_RS14765 0.49 +0.5 3,303,949 + +2.1 3,303,949 + -2.1 3,303,949 + +0.7 3,303,949 + -2.6 3,303,950 - -2.5 3,303,950 - -0.9 3,303,950 - -0.9 3,303,950 - +0.1 3,303,950 - +1.4 3,303,952 + -1.2 3,303,952 + +0.2 3,303,952 + +0.8 3,303,952 + +1.4 3,303,952 + +0.6 3,303,952 + +0.7 3,303,952 + +0.7 3,303,953 - +1.9 3,303,953 - -2.1 3,303,953 - +0.0 3,303,953 - +1.4 3,303,953 - +0.4 3,303,953 - -0.7 3,304,162 + PFLU_RS14770 0.18 +0.7 3,304,163 - PFLU_RS14770 0.18 -2.7 3,304,163 - PFLU_RS14770 0.18 +0.2 3,304,399 + PFLU_RS14770 0.39 -1.2 3,304,399 + PFLU_RS14770 0.39 +0.9 3,304,399 + PFLU_RS14770 0.39 -1.5 3,304,399 + PFLU_RS14770 0.39 -1.7 3,304,399 + PFLU_RS14770 0.39 +2.1 3,304,399 + PFLU_RS14770 0.39 -0.7 3,304,400 - PFLU_RS14770 0.39 -1.7 3,304,400 - PFLU_RS14770 0.39 -0.8 3,304,400 - PFLU_RS14770 0.39 -2.6 3,304,400 - PFLU_RS14770 0.39 +0.6 3,304,400 - PFLU_RS14770 0.39 -0.9 3,304,509 + PFLU_RS14770 0.48 -1.5 3,304,509 + PFLU_RS14770 0.48 -1.5 3,304,509 + PFLU_RS14770 0.48 -0.1 3,304,510 - PFLU_RS14770 0.48 -1.5 3,304,534 + PFLU_RS14770 0.51 -0.7 3,304,534 + PFLU_RS14770 0.51 -0.8 3,304,581 + PFLU_RS14770 0.55 +0.1 3,304,582 - PFLU_RS14770 0.55 -1.7 3,304,582 - PFLU_RS14770 0.55 +0.1 3,304,651 + PFLU_RS14770 0.61 -0.1 3,304,651 + PFLU_RS14770 0.61 +1.5 3,304,859 - PFLU_RS14770 0.79 +0.8 3,305,015 - +1.3 3,305,041 + +2.6 3,305,041 + +0.2 3,305,041 + -0.9 3,305,042 - +0.5 3,305,042 - +1.7 3,305,042 - -0.1 3,305,089 + -0.6 3,305,090 - +1.5 3,305,090 - -1.2 3,305,100 + -0.8 3,305,100 + +0.1 3,305,100 + -0.3 3,305,100 + +0.1 3,305,100 + +2.1 3,305,101 - -0.5 3,305,101 - +0.2 3,305,101 - -2.7 3,305,101 - -2.2 3,305,101 - -0.5 3,305,109 + -1.7 3,305,110 - +0.2 3,305,110 - -2.8 3,305,110 - -1.2 3,305,337 + PFLU_RS14775 0.30 +0.6 3,305,337 + PFLU_RS14775 0.30 -0.5 3,305,338 - PFLU_RS14775 0.30 +0.1 3,305,870 + +0.5 3,305,870 + -1.6 3,305,870 + +1.3 3,305,870 + +0.1 3,305,871 - -0.9 3,305,871 - -1.7 3,305,871 - -1.9 3,305,871 - -0.9 3,305,874 + +0.9 3,305,874 + +0.4 3,305,875 - -0.0 3,305,875 - -0.9 3,305,940 - +2.2 3,305,940 - +0.4 3,305,956 - +2.3 3,305,956 - -1.2 3,305,956 - -0.2 3,305,956 - -0.5 3,305,961 - -0.5 3,305,973 + +0.1 3,305,979 + -2.1 3,305,979 + -0.5 3,305,979 + +1.0 3,305,980 - +1.9 3,306,033 + +0.9 3,306,033 + +0.8 3,306,033 + -1.2 3,306,063 + +1.4 3,306,064 - -1.2 3,306,064 - -0.2 3,306,079 - -0.4 3,306,090 + PFLU_RS14780 0.10 +1.3 3,306,090 + PFLU_RS14780 0.10 +2.1 3,306,090 + PFLU_RS14780 0.10 -2.4
Or see this region's nucleotide sequence