Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS06645

Experiment: 4-Hydroxybenzoic Acid (C) and Ammonium chloride (N); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Hydroxybenzoic Acid (C) and Ammonium chloride (N); with MOPS
1,481,834	-		PFLU_RS06640	0.20	-0.1
1,481,845	-		PFLU_RS06640	0.21	-2.5
1,481,894	+		PFLU_RS06640	0.27	+0.1
1,481,895	-		PFLU_RS06640	0.27	-3.0
1,482,001	+		PFLU_RS06640	0.38	-0.4
1,482,001	+		PFLU_RS06640	0.38	+2.7
1,482,001	+		PFLU_RS06640	0.38	-0.2
1,482,001	+		PFLU_RS06640	0.38	-2.5
1,482,001	+		PFLU_RS06640	0.38	+0.7
1,482,001	+		PFLU_RS06640	0.38	-2.5
1,482,001	+		PFLU_RS06640	0.38	-0.6
1,482,001	+		PFLU_RS06640	0.38	-1.9
1,482,001	+		PFLU_RS06640	0.38	-1.3
1,482,001	+		PFLU_RS06640	0.38	-1.4
1,482,001	+		PFLU_RS06640	0.38	-2.6
1,482,001	+		PFLU_RS06640	0.38	-1.8
1,482,001	+		PFLU_RS06640	0.38	-0.6
1,482,001	+		PFLU_RS06640	0.38	-1.6
1,482,001	+		PFLU_RS06640	0.38	-1.5
1,482,001	+		PFLU_RS06640	0.38	-3.6
1,482,001	+		PFLU_RS06640	0.38	-2.7
1,482,001	+		PFLU_RS06640	0.38	-2.0
1,482,001	+		PFLU_RS06640	0.38	-2.2
1,482,001	+		PFLU_RS06640	0.38	-1.6
1,482,002	-		PFLU_RS06640	0.38	-1.9
1,482,002	-		PFLU_RS06640	0.38	-2.9
1,482,002	-		PFLU_RS06640	0.38	-2.0
1,482,002	-		PFLU_RS06640	0.38	-0.4
1,482,002	-		PFLU_RS06640	0.38	-1.3
1,482,002	-		PFLU_RS06640	0.38	-1.5
1,482,002	-		PFLU_RS06640	0.38	-1.3
1,482,002	-		PFLU_RS06640	0.38	-0.1
1,482,002	-		PFLU_RS06640	0.38	-2.3
1,482,002	-		PFLU_RS06640	0.38	+1.7
1,482,002	-		PFLU_RS06640	0.38	-2.1
1,482,002	-		PFLU_RS06640	0.38	-2.2
1,482,002	-		PFLU_RS06640	0.38	-2.2
1,482,110	+		PFLU_RS06640	0.50	-1.0
1,482,110	+		PFLU_RS06640	0.50	-1.3
1,482,110	+		PFLU_RS06640	0.50	-1.0
1,482,110	+		PFLU_RS06640	0.50	-1.4
1,482,110	+		PFLU_RS06640	0.50	-1.9
1,482,110	+		PFLU_RS06640	0.50	+1.7
1,482,110	+		PFLU_RS06640	0.50	-2.5
1,482,111	-		PFLU_RS06640	0.50	-0.1
1,482,111	-		PFLU_RS06640	0.50	+0.1
1,482,111	-		PFLU_RS06640	0.50	-1.9
1,482,183	+		PFLU_RS06640	0.58	+0.3
1,482,183	+		PFLU_RS06640	0.58	-0.9
1,482,184	-		PFLU_RS06640	0.58	+0.5
1,482,184	-		PFLU_RS06640	0.58	-0.5
1,482,208	+		PFLU_RS06640	0.61	-0.3
1,482,208	+		PFLU_RS06640	0.61	-0.9
1,482,208	+		PFLU_RS06640	0.61	-0.9
1,482,208	+		PFLU_RS06640	0.61	+1.7
1,482,208	+		PFLU_RS06640	0.61	-1.5
1,482,208	+		PFLU_RS06640	0.61	-1.3
1,482,208	+		PFLU_RS06640	0.61	-0.3
1,482,208	+		PFLU_RS06640	0.61	-3.5
1,482,208	+		PFLU_RS06640	0.61	-1.6
1,482,209	-		PFLU_RS06640	0.61	+0.1
1,482,209	-		PFLU_RS06640	0.61	-3.4
1,482,209	-		PFLU_RS06640	0.61	-3.4
1,482,209	-		PFLU_RS06640	0.61	-3.0
1,482,288	-		PFLU_RS06640	0.69	-1.5
1,482,303	+		PFLU_RS06640	0.71	-1.5
1,482,304	-		PFLU_RS06640	0.71	-2.0
1,482,308	+		PFLU_RS06640	0.72	-2.2
1,482,308	+		PFLU_RS06640	0.72	-1.9
1,482,308	+		PFLU_RS06640	0.72	-0.3
1,482,309	-		PFLU_RS06640	0.72	-1.8
1,482,309	-		PFLU_RS06640	0.72	-0.8
1,482,309	-		PFLU_RS06640	0.72	-1.3
1,482,309	-		PFLU_RS06640	0.72	-0.3
1,482,314	+		PFLU_RS06640	0.72	-1.5
1,482,314	+		PFLU_RS06640	0.72	-1.8
1,482,314	+		PFLU_RS06640	0.72	-1.9
1,482,314	+		PFLU_RS06640	0.72	-1.8
1,482,314	+		PFLU_RS06640	0.72	+1.4
1,482,314	+		PFLU_RS06640	0.72	-1.3
1,482,314	+		PFLU_RS06640	0.72	-0.3
1,482,315	-		PFLU_RS06640	0.72	-2.0
1,482,315	-		PFLU_RS06640	0.72	-0.9
1,482,325	+		PFLU_RS06640	0.73	-1.8
1,482,326	-		PFLU_RS06640	0.73	-1.5
1,482,326	-		PFLU_RS06640	0.73	+1.0
1,482,419	+		PFLU_RS06640	0.84	-2.2
1,482,419	+		PFLU_RS06640	0.84	-2.1
1,482,419	+		PFLU_RS06640	0.84	-2.8
1,482,419	+		PFLU_RS06640	0.84	-1.5
1,482,419	+		PFLU_RS06640	0.84	-1.2
1,482,419	+		PFLU_RS06640	0.84	-2.5
1,482,419	+		PFLU_RS06640	0.84	-0.8
1,482,419	+		PFLU_RS06640	0.84	-3.8
1,482,420	-		PFLU_RS06640	0.84	+1.0
1,482,420	-		PFLU_RS06640	0.84	-0.6
1,482,420	-		PFLU_RS06640	0.84	+0.1
1,482,420	-		PFLU_RS06640	0.84	-0.4
1,482,420	-		PFLU_RS06640	0.84	-1.9
1,482,420	-		PFLU_RS06640	0.84	-0.6
1,482,420	-		PFLU_RS06640	0.84	-2.2
1,482,420	-		PFLU_RS06640	0.84	+0.4
1,482,420	-		PFLU_RS06640	0.84	-2.0
1,482,434	+		PFLU_RS06640	0.85	-1.0
1,482,434	+		PFLU_RS06640	0.85	-2.2
1,482,434	+		PFLU_RS06640	0.85	-1.0
1,482,434	+		PFLU_RS06640	0.85	+0.3
1,482,434	+		PFLU_RS06640	0.85	-0.0
1,482,434	+		PFLU_RS06640	0.85	-1.1
1,482,434	+		PFLU_RS06640	0.85	-0.2
1,482,434	+		PFLU_RS06640	0.85	-1.8
1,482,434	+		PFLU_RS06640	0.85	-0.3
1,482,434	+		PFLU_RS06640	0.85	-2.8
1,482,434	+		PFLU_RS06640	0.85	-1.5
1,482,434	+		PFLU_RS06640	0.85	+0.7
1,482,434	+		PFLU_RS06640	0.85	-2.6
1,482,434	+		PFLU_RS06640	0.85	-0.3
1,482,434	+		PFLU_RS06640	0.85	+0.7
1,482,434	+		PFLU_RS06640	0.85	+0.4
1,482,434	+		PFLU_RS06640	0.85	-0.1
1,482,434	+		PFLU_RS06640	0.85	+0.0
1,482,434	+		PFLU_RS06640	0.85	-3.5
1,482,435	-		PFLU_RS06640	0.85	-2.0
1,482,435	-		PFLU_RS06640	0.85	+0.3
1,482,435	-		PFLU_RS06640	0.85	+0.2
1,482,435	-		PFLU_RS06640	0.85	+0.1
1,482,435	-		PFLU_RS06640	0.85	-0.9
1,482,435	-		PFLU_RS06640	0.85	-2.5
1,482,435	-		PFLU_RS06640	0.85	-0.1
1,482,435	-		PFLU_RS06640	0.85	-0.3
1,482,435	-		PFLU_RS06640	0.85	-0.0
1,482,435	-		PFLU_RS06640	0.85	+0.5
1,482,435	-		PFLU_RS06640	0.85	-1.8
1,482,435	-		PFLU_RS06640	0.85	-1.2
1,482,435	-		PFLU_RS06640	0.85	-3.1
1,482,435	-		PFLU_RS06640	0.85	-2.8
1,482,435	-		PFLU_RS06640	0.85	-2.4
1,482,435	-		PFLU_RS06640	0.85	-1.7
1,482,435	-		PFLU_RS06640	0.85	-0.6
1,482,435	-		PFLU_RS06640	0.85	-1.5
1,482,435	-		PFLU_RS06640	0.85	-1.6
1,482,435	-		PFLU_RS06640	0.85	-0.8
1,482,435	-		PFLU_RS06640	0.85	-2.3
1,482,476	+		PFLU_RS06640	0.90	-0.6
1,482,476	+		PFLU_RS06640	0.90	-2.9
1,482,477	-		PFLU_RS06640	0.90	-1.3
1,482,477	-		PFLU_RS06640	0.90	-1.2
1,482,488	+				-1.5
1,482,488	+				-0.8
1,482,489	-				+0.7
1,482,509	+				-2.1
1,482,509	+				-2.3
1,482,509	+				-1.8
1,482,509	+				-1.1
1,482,509	+				-2.8
1,482,509	+				-1.3
1,482,509	+				-0.9
1,482,509	+				-1.6
1,482,509	+				-1.4
1,482,509	+				-3.1
1,482,509	+				-1.5
1,482,509	+				-0.9
1,482,509	+				-1.6
1,482,509	+				-2.1
1,482,509	+				-1.0
1,482,510	-				-2.9
1,482,510	-				-1.2
1,482,510	-				-2.0
1,482,510	-				-0.3
1,482,510	-				-0.6
1,482,510	-				-1.2
1,482,510	-				-2.5
1,482,510	-				-2.3
1,482,510	-				-1.5
1,482,510	-				-0.3
1,482,510	-				-2.0
1,482,510	-				-2.9
1,482,510	-				-1.6
1,482,510	-				-1.1
1,482,510	-				-2.5
1,482,510	-				+1.0
1,482,510	-				-2.8
1,482,510	-				-2.8
1,482,510	-				+0.1
1,482,557	+				-0.3
1,482,557	+				+2.0
1,482,557	+				+0.7
1,482,558	-				-2.3
1,482,558	-				-1.0
1,482,558	-				+1.0
1,482,558	-				-1.8
1,482,558	-				-2.4
1,482,571	+				-1.5
1,482,571	+				-0.6
1,482,571	+				-1.7
1,482,572	-				+2.3
1,482,572	-				-1.5
1,482,572	-				-2.9
1,482,572	-				-0.6
1,482,572	-				+1.3
1,482,572	-				-1.8
1,482,572	-				-1.6
1,482,572	-				-0.3
1,482,572	-				-2.5
1,482,572	-				-2.9
1,482,582	+				-2.2
1,482,582	+				-1.1
1,482,583	-				-1.2
1,482,583	-				-0.8
1,482,593	+				-2.7
1,482,691	-				-0.6
1,482,691	-				-0.5
1,482,737	+				-3.1
1,482,738	-				-0.3
1,482,738	-				-0.4
1,482,738	-				+1.2
1,482,801	+				-2.6
1,482,801	+				-1.5
1,482,802	-				+1.0
1,482,802	-				-0.6
1,482,802	-				+0.6
1,482,802	-				+1.1
1,482,846	+				-3.1
1,482,846	+				-2.5
1,482,846	+				-0.8
1,482,847	-				+0.5
1,482,847	-				-2.5
1,482,847	-				+0.4
1,482,847	-				-0.3
1,482,847	-				-1.7
1,482,847	-				-1.8
1,482,847	-				-0.3
1,482,847	-				-3.0
1,482,847	-				-0.3
1,482,904	+				-1.3
1,482,905	-				-1.5
1,483,005	+		PFLU_RS06645	0.18	-1.8
1,483,006	-		PFLU_RS06645	0.18	-1.5
1,483,242	+		PFLU_RS06645	0.39	-2.1
1,483,251	+		PFLU_RS06645	0.40	-3.5
1,483,251	+		PFLU_RS06645	0.40	-1.4
1,483,251	+		PFLU_RS06645	0.40	-1.9
1,483,251	+		PFLU_RS06645	0.40	-1.9
1,483,252	-		PFLU_RS06645	0.40	-0.9
1,483,252	-		PFLU_RS06645	0.40	-1.5
1,483,252	-		PFLU_RS06645	0.40	-1.6
1,483,252	-		PFLU_RS06645	0.40	-0.4
1,483,254	+		PFLU_RS06645	0.40	-1.1
1,483,254	+		PFLU_RS06645	0.40	-2.5
1,483,255	-		PFLU_RS06645	0.40	+1.7
1,483,255	-		PFLU_RS06645	0.40	-1.8
1,483,398	+		PFLU_RS06645	0.53	-1.6
1,483,398	+		PFLU_RS06645	0.53	-0.5
1,483,398	+		PFLU_RS06645	0.53	-1.1
1,483,398	+		PFLU_RS06645	0.53	-2.4
1,483,398	+		PFLU_RS06645	0.53	-2.9
1,483,399	-		PFLU_RS06645	0.53	-2.3
1,483,399	-		PFLU_RS06645	0.53	+0.8
1,483,399	-		PFLU_RS06645	0.53	-2.2
1,483,399	-		PFLU_RS06645	0.53	+0.1
1,483,399	-		PFLU_RS06645	0.53	-0.4
1,483,399	-		PFLU_RS06645	0.53	-0.9
1,483,455	+		PFLU_RS06645	0.58	+1.1
1,483,455	+		PFLU_RS06645	0.58	-0.5
1,483,455	+		PFLU_RS06645	0.58	-0.6
1,483,455	+		PFLU_RS06645	0.58	-1.9
1,483,455	+		PFLU_RS06645	0.58	-0.7
1,483,455	+		PFLU_RS06645	0.58	-3.0
1,483,455	+		PFLU_RS06645	0.58	-1.8
1,483,455	+		PFLU_RS06645	0.58	-1.2
1,483,455	+		PFLU_RS06645	0.58	-1.9
1,483,455	+		PFLU_RS06645	0.58	-4.2
1,483,455	+		PFLU_RS06645	0.58	+0.6
1,483,456	-		PFLU_RS06645	0.58	-0.3
1,483,456	-		PFLU_RS06645	0.58	+0.1
1,483,456	-		PFLU_RS06645	0.58	-1.8
1,483,456	-		PFLU_RS06645	0.58	+0.7
1,483,456	-		PFLU_RS06645	0.58	-2.2
1,483,456	-		PFLU_RS06645	0.58	-0.9
1,483,456	-		PFLU_RS06645	0.58	+0.7
1,483,456	-		PFLU_RS06645	0.58	-0.3
1,483,456	-		PFLU_RS06645	0.58	-0.6
1,483,456	-		PFLU_RS06645	0.58	-0.4
1,483,456	-		PFLU_RS06645	0.58	-2.0
1,483,456	-		PFLU_RS06645	0.58	-2.9
1,483,456	-		PFLU_RS06645	0.58	-1.6
1,483,456	-		PFLU_RS06645	0.58	-1.4
1,483,456	-		PFLU_RS06645	0.58	-0.9
1,483,456	-		PFLU_RS06645	0.58	-2.0
1,483,456	-		PFLU_RS06645	0.58	-2.9
1,483,515	+		PFLU_RS06645	0.63	-0.6
1,483,515	+		PFLU_RS06645	0.63	+2.7
1,483,515	+		PFLU_RS06645	0.63	-0.7
1,483,516	-		PFLU_RS06645	0.63	+0.7
1,483,516	-		PFLU_RS06645	0.63	-1.9
1,483,516	-		PFLU_RS06645	0.63	+0.1
1,483,516	-		PFLU_RS06645	0.63	-1.1
1,483,556	-		PFLU_RS06645	0.67	-1.8
1,483,556	-		PFLU_RS06645	0.67	-1.3
1,483,556	-		PFLU_RS06645	0.67	-0.4
1,483,581	+		PFLU_RS06645	0.69	-1.3
1,483,581	+		PFLU_RS06645	0.69	-1.5
1,483,581	+		PFLU_RS06645	0.69	-0.4
1,483,581	+		PFLU_RS06645	0.69	-1.9
1,483,581	+		PFLU_RS06645	0.69	-0.9
1,483,581	+		PFLU_RS06645	0.69	-1.6
1,483,581	+		PFLU_RS06645	0.69	-1.3
1,483,581	+		PFLU_RS06645	0.69	-0.9
1,483,581	+		PFLU_RS06645	0.69	-3.1
1,483,581	+		PFLU_RS06645	0.69	-1.1
1,483,581	+		PFLU_RS06645	0.69	-3.2
1,483,581	+		PFLU_RS06645	0.69	-1.9
1,483,581	+		PFLU_RS06645	0.69	-1.3
1,483,581	+		PFLU_RS06645	0.69	-1.2
1,483,581	+		PFLU_RS06645	0.69	-1.9
1,483,581	+		PFLU_RS06645	0.69	+0.7
1,483,581	+		PFLU_RS06645	0.69	-2.4
1,483,581	+		PFLU_RS06645	0.69	-2.0
1,483,581	+		PFLU_RS06645	0.69	-0.6
1,483,582	-		PFLU_RS06645	0.69	-1.5
1,483,582	-		PFLU_RS06645	0.69	-2.3
1,483,582	-		PFLU_RS06645	0.69	+2.2
1,483,582	-		PFLU_RS06645	0.69	-2.3
1,483,582	-		PFLU_RS06645	0.69	-2.4
1,483,582	-		PFLU_RS06645	0.69	-2.3
1,483,582	-		PFLU_RS06645	0.69	+1.7
1,483,582	-		PFLU_RS06645	0.69	-1.7
1,483,582	-		PFLU_RS06645	0.69	-0.8
1,483,582	-		PFLU_RS06645	0.69	-1.8
1,483,582	-		PFLU_RS06645	0.69	-0.9
1,483,582	-		PFLU_RS06645	0.69	-0.9
1,483,582	-		PFLU_RS06645	0.69	+0.3
1,483,582	-		PFLU_RS06645	0.69	-2.5
1,483,582	-		PFLU_RS06645	0.69	-2.9
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