Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS06415

Experiment: 4-Hydroxybenzoic Acid (C) and Ammonium chloride (N); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Hydroxybenzoic Acid (C) and Ammonium chloride (N); with MOPS
1,436,037	+				-1.3
1,436,072	+		PFLU_RS06410	0.13	-2.3
1,436,097	+		PFLU_RS06410	0.15	-0.5
1,436,158	+		PFLU_RS06410	0.21	+0.0
1,436,158	+		PFLU_RS06410	0.21	-2.9
1,436,158	+		PFLU_RS06410	0.21	-0.6
1,436,158	+		PFLU_RS06410	0.21	+1.3
1,436,158	+		PFLU_RS06410	0.21	+1.3
1,436,158	+		PFLU_RS06410	0.21	+1.7
1,436,158	+		PFLU_RS06410	0.21	+1.1
1,436,159	-		PFLU_RS06410	0.21	+1.7
1,436,159	-		PFLU_RS06410	0.21	+0.1
1,436,159	-		PFLU_RS06410	0.21	+1.3
1,436,159	-		PFLU_RS06410	0.21	-3.0
1,436,159	-		PFLU_RS06410	0.21	-1.6
1,436,213	+		PFLU_RS06410	0.26	+0.2
1,436,213	+		PFLU_RS06410	0.26	+2.6
1,436,413	+		PFLU_RS06410	0.45	+1.5
1,436,413	+		PFLU_RS06410	0.45	-1.7
1,436,413	+		PFLU_RS06410	0.45	-1.4
1,436,413	+		PFLU_RS06410	0.45	+1.0
1,436,413	+		PFLU_RS06410	0.45	+0.4
1,436,414	-		PFLU_RS06410	0.45	-1.1
1,436,414	-		PFLU_RS06410	0.45	-1.3
1,436,414	-		PFLU_RS06410	0.45	+0.9
1,436,414	-		PFLU_RS06410	0.45	+0.2
1,436,539	+		PFLU_RS06410	0.57	+0.4
1,436,539	+		PFLU_RS06410	0.57	+0.3
1,436,539	+		PFLU_RS06410	0.57	+2.7
1,436,540	-		PFLU_RS06410	0.57	-0.1
1,436,540	-		PFLU_RS06410	0.57	+0.3
1,436,540	-		PFLU_RS06410	0.57	-1.5
1,436,540	-		PFLU_RS06410	0.57	+0.4
1,436,540	-		PFLU_RS06410	0.57	+0.3
1,436,540	-		PFLU_RS06410	0.57	+0.5
1,436,866	+		PFLU_RS06410	0.88	+0.3
1,436,866	+		PFLU_RS06410	0.88	-1.0
1,436,867	-		PFLU_RS06410	0.88	-0.5
1,436,984	+				+0.5
1,436,984	+				-2.0
1,436,984	+				-0.3
1,436,984	+				-0.8
1,436,984	+				-1.0
1,436,984	+				+0.7
1,436,984	+				-0.1
1,436,985	-				+0.0
1,436,985	-				-0.1
1,436,985	-				-1.5
1,436,985	-				-1.0
1,437,036	+				-1.6
1,437,036	+				+0.7
1,437,036	+				-0.4
1,437,036	+				-2.6
1,437,036	+				+0.7
1,437,036	+				-1.3
1,437,037	-				-1.3
1,437,037	-				-0.1
1,437,037	-				-0.6
1,437,037	-				-1.3
1,437,037	-				-0.9
1,437,037	-				-0.6
1,437,037	-				-2.2
1,437,037	-				+0.1
1,437,037	-				+0.4
1,437,037	-				+0.4
1,437,037	-				-0.9
1,437,037	-				-1.0
1,437,037	-				-1.9
1,437,037	-				-2.2
1,437,054	+		PFLU_RS06415	0.10	-1.7
1,437,055	-		PFLU_RS06415	0.10	-0.8
1,437,158	+		PFLU_RS06415	0.24	-2.3
1,437,158	+		PFLU_RS06415	0.24	-0.2
1,437,282	+		PFLU_RS06415	0.40	-0.9
1,437,282	+		PFLU_RS06415	0.40	-1.3
1,437,283	-		PFLU_RS06415	0.41	-0.9
1,437,283	-		PFLU_RS06415	0.41	-1.0
1,437,283	-		PFLU_RS06415	0.41	-1.9
1,437,387	+		PFLU_RS06415	0.54	+0.2
1,437,387	+		PFLU_RS06415	0.54	-1.3
1,437,388	-		PFLU_RS06415	0.55	-2.1
1,437,388	-		PFLU_RS06415	0.55	-0.7
1,437,388	-		PFLU_RS06415	0.55	-1.4
1,437,388	-		PFLU_RS06415	0.55	-1.9
1,437,388	-		PFLU_RS06415	0.55	+0.3
1,437,482	+		PFLU_RS06415	0.67	-0.6
1,437,482	+		PFLU_RS06415	0.67	-0.0
1,437,483	-		PFLU_RS06415	0.67	-1.1
1,437,483	-		PFLU_RS06415	0.67	-1.3
1,437,544	+		PFLU_RS06415	0.75	+0.0
1,437,545	-		PFLU_RS06415	0.75	-1.1
1,437,545	-		PFLU_RS06415	0.75	-0.3
1,437,570	+		PFLU_RS06415	0.79	-1.1
1,437,570	+		PFLU_RS06415	0.79	-1.3
1,437,570	+		PFLU_RS06415	0.79	+0.3
1,437,571	-		PFLU_RS06415	0.79	+0.7
1,437,571	-		PFLU_RS06415	0.79	-1.0
1,437,642	+		PFLU_RS06415	0.88	+2.7
1,437,642	+		PFLU_RS06415	0.88	-0.0
1,437,642	+		PFLU_RS06415	0.88	+0.7
1,437,642	+		PFLU_RS06415	0.88	+0.1
1,437,642	+		PFLU_RS06415	0.88	-0.3
1,437,642	+		PFLU_RS06415	0.88	-2.7
1,437,642	+		PFLU_RS06415	0.88	+0.8
1,437,642	+		PFLU_RS06415	0.88	-1.0
1,437,642	+		PFLU_RS06415	0.88	-2.4
1,437,642	+		PFLU_RS06415	0.88	+1.3
1,437,642	+		PFLU_RS06415	0.88	-2.9
1,437,642	+		PFLU_RS06415	0.88	-1.9
1,437,642	+		PFLU_RS06415	0.88	-2.4
1,437,642	+		PFLU_RS06415	0.88	-2.2
1,437,643	-		PFLU_RS06415	0.89	-1.1
1,437,643	-		PFLU_RS06415	0.89	+1.0
1,437,643	-		PFLU_RS06415	0.89	-2.7
1,437,643	-		PFLU_RS06415	0.89	-2.1
1,437,643	-		PFLU_RS06415	0.89	-0.2
1,437,643	-		PFLU_RS06415	0.89	-0.1
1,437,643	-		PFLU_RS06415	0.89	-1.0
1,437,643	-		PFLU_RS06415	0.89	+0.0
1,437,653	+		PFLU_RS06415	0.90	+0.8
1,437,653	+		PFLU_RS06415	0.90	-1.6
1,437,653	+		PFLU_RS06415	0.90	-1.7
1,437,653	+		PFLU_RS06415	0.90	-1.3
1,437,654	-				-1.1
1,437,812	+		PFLU_RS06420	0.12	-1.6
1,437,812	+		PFLU_RS06420	0.12	-0.6
1,437,812	+		PFLU_RS06420	0.12	-0.2
1,437,812	+		PFLU_RS06420	0.12	-1.9
1,437,812	+		PFLU_RS06420	0.12	-2.3
1,437,812	+		PFLU_RS06420	0.12	+0.9
1,437,812	+		PFLU_RS06420	0.12	-1.4
1,437,812	+		PFLU_RS06420	0.12	-1.4
1,437,813	-		PFLU_RS06420	0.13	-1.7
1,437,813	-		PFLU_RS06420	0.13	-0.5
1,437,813	-		PFLU_RS06420	0.13	-0.6
1,437,813	-		PFLU_RS06420	0.13	-1.7
1,437,813	-		PFLU_RS06420	0.13	-2.7
1,437,859	+		PFLU_RS06420	0.19	-0.6
1,437,859	+		PFLU_RS06420	0.19	+0.2
1,437,905	+		PFLU_RS06420	0.26	-0.6
1,437,905	+		PFLU_RS06420	0.26	+1.7
1,437,905	+		PFLU_RS06420	0.26	-2.0
1,437,906	-		PFLU_RS06420	0.26	+1.1
1,437,906	-		PFLU_RS06420	0.26	+0.1
1,437,956	+		PFLU_RS06420	0.34	+1.1
1,437,956	+		PFLU_RS06420	0.34	-0.3
1,437,956	+		PFLU_RS06420	0.34	+0.1
1,437,956	+		PFLU_RS06420	0.34	+0.3
1,437,956	+		PFLU_RS06420	0.34	-3.2
1,437,956	+		PFLU_RS06420	0.34	+0.4
1,437,956	+		PFLU_RS06420	0.34	+0.4
1,437,956	+		PFLU_RS06420	0.34	-1.9
1,437,956	+		PFLU_RS06420	0.34	-0.9
1,437,956	+		PFLU_RS06420	0.34	-0.1
1,437,956	+		PFLU_RS06420	0.34	-1.3
1,437,956	+		PFLU_RS06420	0.34	-0.9
1,437,956	+		PFLU_RS06420	0.34	-2.2
1,437,957	-		PFLU_RS06420	0.34	-1.1
1,437,957	-		PFLU_RS06420	0.34	+0.2
1,437,957	-		PFLU_RS06420	0.34	-2.2
1,437,957	-		PFLU_RS06420	0.34	-0.9
1,437,957	-		PFLU_RS06420	0.34	-0.6
1,437,957	-		PFLU_RS06420	0.34	-0.4
1,437,957	-		PFLU_RS06420	0.34	-1.4
1,437,957	-		PFLU_RS06420	0.34	+0.1
1,437,957	-		PFLU_RS06420	0.34	-0.9
1,437,957	-		PFLU_RS06420	0.34	-2.1
1,437,957	-		PFLU_RS06420	0.34	-0.9
1,438,199	+		PFLU_RS06420	0.69	-1.1
1,438,199	+		PFLU_RS06420	0.69	-2.0
1,438,199	+		PFLU_RS06420	0.69	-0.6
1,438,199	+		PFLU_RS06420	0.69	+0.4
1,438,199	+		PFLU_RS06420	0.69	-0.0
1,438,199	+		PFLU_RS06420	0.69	+0.1
1,438,199	+		PFLU_RS06420	0.69	-1.3
1,438,199	+		PFLU_RS06420	0.69	-2.0
1,438,199	+		PFLU_RS06420	0.69	-1.9
1,438,199	+		PFLU_RS06420	0.69	-0.2
1,438,199	+		PFLU_RS06420	0.69	-2.2
1,438,199	+		PFLU_RS06420	0.69	-1.2
1,438,200	-		PFLU_RS06420	0.70	-2.0
1,438,200	-		PFLU_RS06420	0.70	-1.3
1,438,200	-		PFLU_RS06420	0.70	-1.6
1,438,200	-		PFLU_RS06420	0.70	-1.4
1,438,200	-		PFLU_RS06420	0.70	-0.9
1,438,200	-		PFLU_RS06420	0.70	-1.4
1,438,200	-		PFLU_RS06420	0.70	-2.2
1,438,200	-		PFLU_RS06420	0.70	-1.4
1,438,200	-		PFLU_RS06420	0.70	+0.1
1,438,200	-		PFLU_RS06420	0.70	-2.7
1,438,200	-		PFLU_RS06420	0.70	+1.3
1,438,200	-		PFLU_RS06420	0.70	+0.1
1,438,200	-		PFLU_RS06420	0.70	-1.9
1,438,200	-		PFLU_RS06420	0.70	-1.2
1,438,200	-		PFLU_RS06420	0.70	+0.5
1,438,324	+		PFLU_RS06420	0.88	-1.3
1,438,324	+		PFLU_RS06420	0.88	+0.6
1,438,325	-		PFLU_RS06420	0.88	-3.0
1,438,325	-		PFLU_RS06420	0.88	+0.6
1,438,449	+				-1.7
1,438,450	-				+1.2
1,438,461	+				-0.0
1,438,461	+				-0.4
1,438,461	+				+0.7
1,438,461	+				+0.7
1,438,461	+				-0.1
1,438,461	+				-3.0
1,438,461	+				+1.4
1,438,462	-				-0.9
1,438,462	-				-1.1
1,438,490	+				+0.3
1,438,491	-				+2.1
1,438,546	+				+2.6
1,438,546	+				-0.8
1,438,546	+				-1.3
1,438,546	+				+0.2
1,438,546	+				-1.1
1,438,546	+				+0.1
1,438,547	-				-0.0
1,438,547	-				-0.6
1,438,547	-				+0.7
1,438,547	-				+0.1
1,438,547	-				+1.1
1,438,547	-				+0.0
1,438,548	+				+1.6
1,438,548	+				+1.1
1,438,548	+				-1.4
1,438,549	-				-0.2
1,438,549	-				-0.4
1,438,549	-				+0.7
1,438,549	-				+0.7
1,438,549	-				-1.6
1,438,549	-				-2.4
1,438,549	-				+0.2
1,438,559	+				+0.4
1,438,560	-				-1.0
1,438,560	-				-2.2
1,438,560	-				-1.3
1,438,560	-				-1.4
1,438,560	-				-1.3
1,438,573	+				-1.1
1,438,573	+				-1.3
1,438,573	+				+0.4
1,438,639	+				-1.1
1,438,639	+				-1.9
1,438,639	+				-0.3
1,438,639	+				-0.1
1,438,639	+				+0.2
1,438,639	+				+0.4
1,438,639	+				-0.9
1,438,639	+				-2.4
1,438,639	+				-1.3
1,438,639	+				-1.1
1,438,639	+				-1.4
1,438,639	+				+0.7
1,438,639	+				+3.0
1,438,639	+				+0.4
1,438,640	-				+2.2
1,438,640	-				-1.4
1,438,640	-				+0.1