Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_19550

Experiment: Anaerobic, acetate donor; nitrate and iron

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Anaerobic, acetate donor; nitrate and iron
4,282,859	+		AO353_19540	0.11	+0.0
4,282,859	+		AO353_19540	0.11	-1.2
4,282,860	-		AO353_19540	0.11	-0.2
4,282,860	-		AO353_19540	0.11	+1.8
4,282,886	-		AO353_19540	0.18	-1.5
4,282,886	-		AO353_19540	0.18	+1.6
4,282,913	+		AO353_19540	0.24	+1.6
4,282,913	+		AO353_19540	0.24	+0.5
4,282,913	+		AO353_19540	0.24	+0.8
4,282,913	+		AO353_19540	0.24	-2.0
4,282,914	-		AO353_19540	0.25	+2.3
4,282,914	-		AO353_19540	0.25	-1.9
4,282,914	-		AO353_19540	0.25	-1.0
4,282,914	-		AO353_19540	0.25	+1.2
4,283,020	-		AO353_19540	0.52	-1.1
4,283,020	-		AO353_19540	0.52	+0.5
4,283,060	+		AO353_19540	0.62	+0.6
4,283,060	+		AO353_19540	0.62	-0.7
4,283,060	+		AO353_19540	0.62	-2.8
4,283,060	+		AO353_19540	0.62	-2.1
4,283,060	+		AO353_19540	0.62	-1.0
4,283,061	-		AO353_19540	0.62	-1.2
4,283,061	-		AO353_19540	0.62	+2.0
4,283,061	-		AO353_19540	0.62	+1.6
4,283,061	-		AO353_19540	0.62	+1.2
4,283,061	-		AO353_19540	0.62	-1.4
4,283,093	+		AO353_19540	0.70	-1.0
4,283,093	+		AO353_19540	0.70	-2.0
4,283,093	+		AO353_19540	0.70	+0.1
4,283,093	+		AO353_19540	0.70	-0.7
4,283,094	-		AO353_19540	0.70	-1.7
4,283,121	+		AO353_19540	0.77	-0.5
4,283,121	+		AO353_19540	0.77	+3.0
4,283,121	+		AO353_19540	0.77	+3.6
4,283,121	+		AO353_19540	0.77	+1.3
4,283,121	+		AO353_19540	0.77	-1.8
4,283,121	+		AO353_19540	0.77	-0.7
4,283,121	+		AO353_19540	0.77	-0.8
4,283,121	+		AO353_19540	0.77	-0.0
4,283,122	-		AO353_19540	0.77	-0.2
4,283,122	-		AO353_19540	0.77	+0.6
4,283,122	-				-1.6
4,283,293	+				+1.3
4,283,293	+				+1.2
4,283,294	-				-0.6
4,283,294	-				-1.8
4,283,294	-				-1.8
4,283,294	-				+0.9
4,283,294	-				-1.5
4,283,294	-				-2.6
4,283,294	-				-2.3
4,283,321	-				-1.4
4,283,409	+		AO353_19545	0.30	-0.8
4,283,409	+		AO353_19545	0.30	-1.0
4,283,409	+		AO353_19545	0.30	-2.9
4,283,409	+		AO353_19545	0.30	-1.4
4,283,409	+		AO353_19545	0.30	-2.5
4,283,409	+		AO353_19545	0.30	-2.5
4,283,409	+		AO353_19545	0.30	+1.2
4,283,409	+		AO353_19545	0.30	+2.5
4,283,409	+		AO353_19545	0.30	+0.9
4,283,409	+		AO353_19545	0.30	+0.6
4,283,410	-		AO353_19545	0.30	+0.5
4,283,410	-		AO353_19545	0.30	+0.0
4,283,410	-		AO353_19545	0.30	-2.4
4,283,410	-		AO353_19545	0.30	-1.0
4,283,410	-		AO353_19545	0.30	-1.5
4,283,410	-		AO353_19545	0.30	-0.8
4,283,410	-		AO353_19545	0.30	+0.3
4,283,410	-		AO353_19545	0.30	+1.6
4,283,410	-		AO353_19545	0.30	-1.1
4,283,410	-		AO353_19545	0.30	-1.0
4,283,410	-		AO353_19545	0.30	+0.6
4,283,507	+		AO353_19545	0.55	+0.3
4,283,508	-		AO353_19545	0.55	-0.8
4,283,508	-		AO353_19545	0.55	+0.8
4,283,591	+		AO353_19545	0.77	-1.1
4,283,638	+		AO353_19545	0.89	+0.3
4,283,638	+		AO353_19545	0.89	+0.3
4,283,638	+		AO353_19545	0.89	+1.3
4,283,639	-		AO353_19545	0.89	-1.1
4,283,639	-		AO353_19545	0.89	-1.4
4,283,639	-		AO353_19545	0.89	+2.3
4,283,720	+				+1.3
4,283,720	+				-2.2
4,283,720	+				+0.8
4,283,721	-				-1.6
4,283,743	-				-0.7
4,283,743	-				-2.2
4,283,879	+				-1.8
4,283,880	-				-1.4
4,283,880	-				-0.5
4,283,880	-				-0.2
4,283,880	-				-3.5
4,283,880	-				+1.3
4,283,897	+				-2.2
4,283,897	+				-1.7
4,283,897	+				-1.1
4,283,897	+				-1.1
4,283,898	-				+1.4
4,283,898	-				-1.8
4,283,973	+				-2.4
4,283,973	+				-2.9
4,283,973	+				+0.3
4,283,974	-				-0.8
4,283,974	-				-1.7
4,283,974	-				+0.5
4,284,030	+		AO353_19550	0.13	-0.2
4,284,030	+		AO353_19550	0.13	+1.7
4,284,030	+		AO353_19550	0.13	-0.8
4,284,030	+		AO353_19550	0.13	-1.8
4,284,030	+		AO353_19550	0.13	+0.1
4,284,030	+		AO353_19550	0.13	+2.7
4,284,030	+		AO353_19550	0.13	-1.6
4,284,030	+		AO353_19550	0.13	+0.1
4,284,031	-		AO353_19550	0.13	-2.6
4,284,031	-		AO353_19550	0.13	+2.5
4,284,031	-		AO353_19550	0.13	-1.9
4,284,031	-		AO353_19550	0.13	-1.7
4,284,033	+		AO353_19550	0.13	-1.5
4,284,033	+		AO353_19550	0.13	+0.8
4,284,033	+		AO353_19550	0.13	-2.7
4,284,033	+		AO353_19550	0.13	+0.8
4,284,033	+		AO353_19550	0.13	-1.2
4,284,033	+		AO353_19550	0.13	-0.1
4,284,034	-		AO353_19550	0.13	-1.1
4,284,034	-		AO353_19550	0.13	-0.8
4,284,034	-		AO353_19550	0.13	-1.0
4,284,034	-		AO353_19550	0.13	+1.2
4,284,034	-		AO353_19550	0.13	-2.1
4,284,091	-		AO353_19550	0.17	-1.2
4,284,091	-		AO353_19550	0.17	-0.2
4,284,100	-		AO353_19550	0.18	+1.3
4,284,100	-		AO353_19550	0.18	+1.1
4,284,126	+		AO353_19550	0.20	+1.3
4,284,126	+		AO353_19550	0.20	-0.2
4,284,126	+		AO353_19550	0.20	+1.3
4,284,126	+		AO353_19550	0.20	+0.5
4,284,126	+		AO353_19550	0.20	-2.8
4,284,126	+		AO353_19550	0.20	+1.7
4,284,127	-		AO353_19550	0.20	-2.7
4,284,252	+		AO353_19550	0.29	-0.6
4,284,252	+		AO353_19550	0.29	+1.2
4,284,252	+		AO353_19550	0.29	+1.5
4,284,252	+		AO353_19550	0.29	+1.0
4,284,252	+		AO353_19550	0.29	+0.3
4,284,252	+		AO353_19550	0.29	-1.6
4,284,252	+		AO353_19550	0.29	-1.1
4,284,252	+		AO353_19550	0.29	-1.1
4,284,252	+		AO353_19550	0.29	-1.8
4,284,252	+		AO353_19550	0.29	-0.8
4,284,253	-		AO353_19550	0.29	-1.2
4,284,253	-		AO353_19550	0.29	-1.5
4,284,253	-		AO353_19550	0.29	-0.5
4,284,253	-		AO353_19550	0.29	-0.5
4,284,253	-		AO353_19550	0.29	+1.3
4,284,253	-		AO353_19550	0.29	-0.8
4,284,253	-		AO353_19550	0.29	-1.8
4,284,253	-		AO353_19550	0.29	+1.3
4,284,253	-		AO353_19550	0.29	-2.2
4,284,253	-		AO353_19550	0.29	+1.2
4,284,253	-		AO353_19550	0.29	-1.8
4,284,253	-		AO353_19550	0.29	-2.1
4,284,253	-		AO353_19550	0.29	-3.0
4,284,253	-		AO353_19550	0.29	-1.0
4,284,292	-		AO353_19550	0.32	-2.3
4,284,372	+		AO353_19550	0.38	+0.4
4,284,426	+		AO353_19550	0.42	+0.3
4,284,426	+		AO353_19550	0.42	-2.4
4,284,426	+		AO353_19550	0.42	-1.1
4,284,427	-		AO353_19550	0.42	-2.7
4,284,427	-		AO353_19550	0.42	-1.5
4,284,427	-		AO353_19550	0.42	+1.5
4,284,427	-		AO353_19550	0.42	-1.2
4,284,427	-		AO353_19550	0.42	+0.3
4,284,427	-		AO353_19550	0.42	+2.3
4,284,630	+		AO353_19550	0.57	-1.8
4,284,630	+		AO353_19550	0.57	+1.9
4,284,630	+		AO353_19550	0.57	-1.4
4,284,630	+				-0.2
4,284,630	+		AO353_19550	0.57	-0.2
4,284,631	-		AO353_19550	0.57	-0.5
4,284,631	-		AO353_19550	0.57	-1.0
4,284,631	-		AO353_19550	0.57	-0.1
4,284,631	-		AO353_19550	0.57	-1.0
4,284,631	-		AO353_19550	0.57	+0.6
4,284,631	-		AO353_19550	0.57	-2.1
4,284,631	-		AO353_19550	0.57	+0.3
4,284,648	+		AO353_19550	0.58	+0.7
4,284,648	+		AO353_19550	0.58	-1.7
4,284,648	+		AO353_19550	0.58	-1.7
4,284,648	+		AO353_19550	0.58	-2.2
4,284,648	+		AO353_19550	0.58	+1.2
4,284,648	+		AO353_19550	0.58	-1.0
4,284,648	+		AO353_19550	0.58	+1.1
4,284,648	+		AO353_19550	0.58	+0.8
4,284,648	+		AO353_19550	0.58	-2.0
4,284,649	-		AO353_19550	0.58	-1.8
4,284,649	-		AO353_19550	0.58	-1.6
4,284,649	-		AO353_19550	0.58	+1.7
4,284,649	-		AO353_19550	0.58	+1.2
4,284,819	+		AO353_19550	0.71	-2.5
4,284,819	+		AO353_19550	0.71	-0.5
4,284,820	-		AO353_19550	0.71	-0.6
4,284,820	-		AO353_19550	0.71	-2.7
4,284,820	-		AO353_19550	0.71	-0.1
4,284,820	-		AO353_19550	0.71	-1.9
4,284,897	+		AO353_19550	0.76	-1.4
4,284,897	+		AO353_19550	0.76	-2.5
4,284,898	-		AO353_19550	0.77	-2.8
4,284,898	-		AO353_19550	0.77	+0.3
4,284,898	-		AO353_19550	0.77	-1.8
4,284,927	+		AO353_19550	0.79	+0.3
4,285,001	+		AO353_19550	0.84	+2.2
4,285,002	-		AO353_19550	0.84	-1.0
4,285,020	+		AO353_19550	0.85	-0.5
4,285,020	+		AO353_19550	0.85	-1.9
4,285,020	+		AO353_19550	0.85	+2.1
4,285,020	+				+2.8
4,285,020	+		AO353_19550	0.85	-0.7
4,285,021	-		AO353_19550	0.86	-2.2
4,285,021	-		AO353_19550	0.86	-1.8
4,285,021	-		AO353_19550	0.86	-1.0
4,285,122	+				+0.0
4,285,278	-				-1.6
4,285,278	-				-0.6
4,285,278	-				-1.7
4,285,392	+				-0.7
4,285,392	+				+0.1
4,285,392	+				-2.0
4,285,392	+				+1.2
4,285,393	-				+2.5
4,285,393	-				+1.0
4,285,393	-				-2.4
4,285,393	-				-2.2
4,285,393	-				+0.9
4,285,494	+		AO353_19555	0.18	-0.2
4,285,494	+		AO353_19555	0.18	-0.2
4,285,494	+		AO353_19555	0.18	-2.1
4,285,495	-		AO353_19555	0.18	-2.0
4,285,543	-		AO353_19555	0.22	-0.2
4,285,543	-		AO353_19555	0.22	-1.7
4,285,578	+		AO353_19555	0.24	-0.5
4,285,641	+		AO353_19555	0.30	-2.0
4,285,642	-		AO353_19555	0.30	+0.8
4,285,642	-		AO353_19555	0.30	-1.0
4,285,788	+		AO353_19555	0.42	+2.5
4,285,788	+		AO353_19555	0.42	-2.4
4,285,789	-		AO353_19555	0.42	-2.1
4,285,835	-		AO353_19555	0.45	+1.3
4,285,835	-		AO353_19555	0.45	+1.2
4,285,872	+		AO353_19555	0.48	-0.5
4,285,872	+		AO353_19555	0.48	-0.1
4,285,872	+		AO353_19555	0.48	-1.4
4,285,873	-		AO353_19555	0.48	-0.8
4,285,873	-		AO353_19555	0.48	-2.4
4,285,873	-		AO353_19555	0.48	-1.2
4,285,873	-		AO353_19555	0.48	+0.3
4,285,873	-		AO353_19555	0.48	+1.4
4,285,873	-		AO353_19555	0.48	+2.2
4,285,873	-		AO353_19555	0.48	+0.4
4,285,992	+		AO353_19555	0.58	-0.8
4,285,992	+		AO353_19555	0.58	-2.2
4,285,992	+		AO353_19555	0.58	-2.3
4,285,993	-		AO353_19555	0.58	-1.6
4,285,993	-		AO353_19555	0.58	+0.2
4,285,993	-		AO353_19555	0.58	+1.2
4,285,993	-		AO353_19555	0.58	-2.9
4,286,027	+		AO353_19555	0.61	-0.7
4,286,027	+		AO353_19555	0.61	-0.8
4,286,027	+		AO353_19555	0.61	-2.2
4,286,043	+		AO353_19555	0.62	+1.6
4,286,043	+		AO353_19555	0.62	+0.8
4,286,043	+		AO353_19555	0.62	-1.3
4,286,043	+		AO353_19555	0.62	-3.0
4,286,043	+		AO353_19555	0.62	+0.6
4,286,043	+		AO353_19555	0.62	-0.5
4,286,043	+		AO353_19555	0.62	-0.5
4,286,044	-		AO353_19555	0.62	-2.5
4,286,044	-		AO353_19555	0.62	+0.3
4,286,044	-		AO353_19555	0.62	+0.6
4,286,044	-		AO353_19555	0.62	+1.5
4,286,044	-		AO353_19555	0.62	-1.8
4,286,044	-		AO353_19555	0.62	+3.1
4,286,044	-		AO353_19555	0.62	-0.3
4,286,044	-		AO353_19555	0.62	-1.4
4,286,044	-		AO353_19555	0.62	+1.8
4,286,044	-		AO353_19555	0.62	-0.4
4,286,122	-		AO353_19555	0.69	+0.5
4,286,129	+		AO353_19555	0.69	-1.6
4,286,129	+		AO353_19555	0.69	-1.9
4,286,130	-		AO353_19555	0.69	-0.7
4,286,145	+		AO353_19555	0.71	-1.8
4,286,146	-		AO353_19555	0.71	-1.4
4,286,178	+		AO353_19555	0.73	-0.2
4,286,178	+		AO353_19555	0.73	-0.5
4,286,179	-		AO353_19555	0.73	-0.8
4,286,182	+		AO353_19555	0.74	-3.2
4,286,182	+		AO353_19555	0.74	+1.3
4,286,182	+		AO353_19555	0.74	-0.2
4,286,182	+		AO353_19555	0.74	-0.8
4,286,182	+		AO353_19555	0.74	-0.8
4,286,182	+		AO353_19555	0.74	-1.2
4,286,182	+		AO353_19555	0.74	-1.2
4,286,183	-		AO353_19555	0.74	-0.2
4,286,183	-		AO353_19555	0.74	+0.3
4,286,183	-		AO353_19555	0.74	+1.3
4,286,183	-		AO353_19555	0.74	-2.7
4,286,183	-		AO353_19555	0.74	+1.1
4,286,183	-		AO353_19555	0.74	-2.1
4,286,183	-		AO353_19555	0.74	-1.4
4,286,183	-		AO353_19555	0.74	-1.0
4,286,183	-		AO353_19555	0.74	-2.8