Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_16780

Experiment: Anaerobic, acetate donor; nitrate and iron

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Anaerobic, acetate donor; nitrate and iron
3,717,152	+		AO353_16775	0.12	-1.2
3,717,152	+		AO353_16775	0.12	+1.3
3,717,152	+		AO353_16775	0.12	-2.8
3,717,152	+		AO353_16775	0.12	-1.0
3,717,153	-		AO353_16775	0.12	-1.2
3,717,158	+		AO353_16775	0.13	-2.6
3,717,158	+		AO353_16775	0.13	-0.9
3,717,159	-		AO353_16775	0.13	+0.3
3,717,251	-		AO353_16775	0.22	-0.9
3,717,350	+		AO353_16775	0.31	-0.5
3,717,350	+		AO353_16775	0.31	-1.0
3,717,350	+		AO353_16775	0.31	+0.5
3,717,351	-		AO353_16775	0.32	+1.3
3,717,351	-		AO353_16775	0.32	-0.7
3,717,609	-		AO353_16775	0.56	-2.7
3,717,665	+		AO353_16775	0.62	-1.7
3,717,665	+		AO353_16775	0.62	-1.5
3,717,665	+		AO353_16775	0.62	-2.1
3,717,665	+		AO353_16775	0.62	+4.9
3,717,665	+		AO353_16775	0.62	-0.5
3,717,665	+		AO353_16775	0.62	-1.2
3,717,665	+		AO353_16775	0.62	+0.9
3,717,665	+		AO353_16775	0.62	-1.6
3,717,666	-		AO353_16775	0.62	-0.7
3,717,666	-		AO353_16775	0.62	+1.2
3,717,666	-		AO353_16775	0.62	+1.2
3,717,758	+		AO353_16775	0.71	+0.7
3,717,758	+		AO353_16775	0.71	-0.3
3,717,758	+		AO353_16775	0.71	-0.8
3,717,758	+		AO353_16775	0.71	-0.4
3,717,758	+		AO353_16775	0.71	-0.3
3,717,758	+		AO353_16775	0.71	+1.1
3,717,758	+		AO353_16775	0.71	-1.7
3,717,758	+		AO353_16775	0.71	-0.5
3,717,758	+		AO353_16775	0.71	-2.9
3,717,758	+		AO353_16775	0.71	+3.9
3,717,758	+		AO353_16775	0.71	-0.8
3,717,758	+		AO353_16775	0.71	+0.5
3,717,758	+		AO353_16775	0.71	-0.7
3,717,759	-		AO353_16775	0.71	+1.3
3,717,759	-		AO353_16775	0.71	+1.9
3,717,759	-		AO353_16775	0.71	-0.7
3,717,759	-		AO353_16775	0.71	-1.7
3,717,759	-		AO353_16775	0.71	-1.3
3,717,759	-		AO353_16775	0.71	-0.5
3,717,759	-		AO353_16775	0.71	-1.3
3,717,759	-		AO353_16775	0.71	-0.7
3,717,759	-		AO353_16775	0.71	+0.3
3,717,759	-		AO353_16775	0.71	-0.3
3,717,827	+		AO353_16775	0.77	-1.8
3,717,827	+		AO353_16775	0.77	-0.3
3,717,827	+		AO353_16775	0.77	-0.3
3,717,828	-		AO353_16775	0.77	-1.0
3,717,828	-		AO353_16775	0.77	-2.1
3,718,051	-				-0.1
3,718,061	+				-0.2
3,718,062	-				-0.6
3,718,062	-				+1.7
3,718,062	-				-2.0
3,718,078	+				-0.7
3,718,078	+				-0.9
3,718,079	-				-0.3
3,718,329	-		AO353_16780	0.46	+0.3
3,718,369	+		AO353_16780	0.53	-0.5
3,718,369	+		AO353_16780	0.53	+1.3
3,718,369	+		AO353_16780	0.53	+4.5
3,718,370	-		AO353_16780	0.53	-1.4
3,718,370	-		AO353_16780	0.53	-2.5
3,718,370	-		AO353_16780	0.53	-0.0
3,718,370	-		AO353_16780	0.53	-0.7
3,718,370	-		AO353_16780	0.53	+0.7
3,718,370	-		AO353_16780	0.53	-0.0
3,718,370	-		AO353_16780	0.53	-2.8
3,718,473	+		AO353_16780	0.70	-2.5
3,718,473	+		AO353_16780	0.70	-2.0
3,718,474	-		AO353_16780	0.70	-2.2
3,718,491	+		AO353_16780	0.73	-1.9
3,718,491	+		AO353_16780	0.73	-1.5
3,718,491	+		AO353_16780	0.73	-2.2
3,718,492	-		AO353_16780	0.73	+0.7
3,718,492	-		AO353_16780	0.73	-0.7
3,718,492	-		AO353_16780	0.73	+0.1
3,718,503	+		AO353_16780	0.75	-0.7
3,718,504	-		AO353_16780	0.76	-1.9
3,718,504	-		AO353_16780	0.76	-1.4
3,718,504	-		AO353_16780	0.76	-0.2
3,718,550	-		AO353_16780	0.83	-0.3
3,718,550	-		AO353_16780	0.83	-0.0
3,718,601	+				+0.7
3,718,601	+				+0.3
3,718,602	-				-2.4
3,718,602	-				-0.9
3,718,602	-				-0.7
3,718,623	+				-1.2
3,718,623	+				-0.0
3,718,623	+				-2.2
3,718,623	+				+0.7
3,718,623	+				-0.0
3,718,623	+				-0.9
3,718,624	-				+2.0
3,718,642	+				-1.9
3,718,642	+				+0.7
3,718,642	+				-1.5
3,718,642	+				-2.5
3,718,643	-				+0.1
3,718,643	-				+1.1
3,718,643	-				-1.4
3,718,643	-				-1.2
3,718,643	-				-1.0
3,718,643	-				-2.2
3,718,648	+				-1.7
3,718,649	-				-0.0
3,718,655	+				+2.1
3,718,655	+				+0.3
3,718,691	-				-1.3
3,718,691	-				+2.0
3,718,699	+				+1.3
3,718,700	-				+1.3
3,718,700	-				-0.3
3,718,700	-				-1.0
3,718,754	-				+0.7
3,718,779	-				-2.0
3,718,890	+				-1.3
3,718,890	+				-2.4
3,718,891	-				+3.3
3,718,891	-				+1.3
3,718,891	-				-0.7
3,718,920	+		AO353_16785	0.12	+0.3
3,718,920	+		AO353_16785	0.12	-0.9
3,718,921	-		AO353_16785	0.12	-1.6
3,718,921	-		AO353_16785	0.12	-0.9
3,718,921	-		AO353_16785	0.12	+1.0
3,718,932	+		AO353_16785	0.13	-2.6
3,718,932	+		AO353_16785	0.13	+0.9
3,718,932	+		AO353_16785	0.13	+3.5
3,718,932	+		AO353_16785	0.13	-1.0
3,718,933	-		AO353_16785	0.13	+0.3
3,718,933	-		AO353_16785	0.13	-1.7
3,718,933	-		AO353_16785	0.13	+0.3
3,718,933	-		AO353_16785	0.13	+0.8
3,718,933	-		AO353_16785	0.13	-1.2
3,718,933	-		AO353_16785	0.13	+2.3
3,718,933	-		AO353_16785	0.13	-1.8
3,718,933	-		AO353_16785	0.13	+0.3
3,719,009	+		AO353_16785	0.21	-1.3
3,719,060	+		AO353_16785	0.26	-1.4
3,719,061	-		AO353_16785	0.26	-0.9
3,719,187	-		AO353_16785	0.38	-0.0
3,719,206	+		AO353_16785	0.40	-1.5
3,719,207	-		AO353_16785	0.40	+0.3
3,719,207	-		AO353_16785	0.40	-0.9
3,719,271	+		AO353_16785	0.47	+1.3
3,719,271	+		AO353_16785	0.47	-1.2
3,719,271	+		AO353_16785	0.47	-0.3
3,719,271	+		AO353_16785	0.47	-0.5
3,719,272	-		AO353_16785	0.47	-0.9
3,719,315	+		AO353_16785	0.51	+0.4
3,719,324	+		AO353_16785	0.52	-1.2
3,719,325	-		AO353_16785	0.52	+2.3
3,719,325	-		AO353_16785	0.52	+0.3
3,719,325	-		AO353_16785	0.52	+0.5
3,719,362	+		AO353_16785	0.56	-0.9
3,719,362	+		AO353_16785	0.56	-0.0
3,719,363	-		AO353_16785	0.56	-0.3
3,719,363	-		AO353_16785	0.56	-1.2
3,719,414	+		AO353_16785	0.61	+2.0
3,719,471	+		AO353_16785	0.66	-0.8
3,719,471	+		AO353_16785	0.66	-0.3
3,719,471	+		AO353_16785	0.66	-2.2
3,719,477	+		AO353_16785	0.67	+0.2
3,719,477	+		AO353_16785	0.67	-3.0
3,719,477	+		AO353_16785	0.67	-0.7
3,719,477	+		AO353_16785	0.67	-2.5
3,719,477	+		AO353_16785	0.67	-1.8
3,719,477	+		AO353_16785	0.67	-0.3
3,719,478	-		AO353_16785	0.67	+1.3
3,719,478	-		AO353_16785	0.67	+0.7
3,719,478	-		AO353_16785	0.67	+3.3
3,719,478	-		AO353_16785	0.67	-1.4
3,719,478	-		AO353_16785	0.67	+0.7
3,719,484	-		AO353_16785	0.68	-3.0
3,719,562	+		AO353_16785	0.75	-1.5
3,719,563	-		AO353_16785	0.76	+1.1
3,719,563	-		AO353_16785	0.76	+2.2
3,719,563	-		AO353_16785	0.76	-1.9
3,719,622	+		AO353_16785	0.81	-0.3
3,719,622	+		AO353_16785	0.81	-1.8
3,719,622	+		AO353_16785	0.81	+1.7
3,719,622	+		AO353_16785	0.81	+1.3
3,719,622	+		AO353_16785	0.81	-0.9
3,719,622	+		AO353_16785	0.81	+0.5
3,719,623	-		AO353_16785	0.81	+2.6
3,719,623	-		AO353_16785	0.81	-0.6
3,719,623	-		AO353_16785	0.81	-1.0
3,719,623	-		AO353_16785	0.81	+1.1
3,719,624	+		AO353_16785	0.82	-0.7