Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_16370

Experiment: Anaerobic, acetate donor; nitrate and iron

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Anaerobic, acetate donor; nitrate and iron
3,633,164	+		AO353_16365	0.78	+0.3
3,633,164	+		AO353_16365	0.78	-0.3
3,633,165	-		AO353_16365	0.78	-0.0
3,633,165	-		AO353_16365	0.78	-0.5
3,633,165	-		AO353_16365	0.78	-0.5
3,633,165	-		AO353_16365	0.78	+2.3
3,633,184	+		AO353_16365	0.78	+0.3
3,633,184	+		AO353_16365	0.78	+2.0
3,633,184	+		AO353_16365	0.78	+2.3
3,633,184	+		AO353_16365	0.78	-1.5
3,633,184	+		AO353_16365	0.78	+2.4
3,633,184	+		AO353_16365	0.78	+1.1
3,633,233	+		AO353_16365	0.80	+0.7
3,633,233	+		AO353_16365	0.80	+1.7
3,633,233	+		AO353_16365	0.80	+2.3
3,633,233	+		AO353_16365	0.80	+0.7
3,633,233	+		AO353_16365	0.80	+0.3
3,633,233	+		AO353_16365	0.80	-0.3
3,633,233	+		AO353_16365	0.80	+0.3
3,633,233	+		AO353_16365	0.80	+2.3
3,633,233	+		AO353_16365	0.80	-0.7
3,633,234	-		AO353_16365	0.80	+0.3
3,633,234	-		AO353_16365	0.80	-1.5
3,633,234	-		AO353_16365	0.80	+2.7
3,633,234	-		AO353_16365	0.80	+0.3
3,633,234	-		AO353_16365	0.80	+2.6
3,633,234	-		AO353_16365	0.80	+1.8
3,633,314	+		AO353_16365	0.83	-0.9
3,633,315	-		AO353_16365	0.83	+1.3
3,633,315	-		AO353_16365	0.83	+1.8
3,633,339	+		AO353_16365	0.83	-0.9
3,633,339	+		AO353_16365	0.83	+0.7
3,633,339	+		AO353_16365	0.83	-1.0
3,633,340	-		AO353_16365	0.83	-0.7
3,633,340	-		AO353_16365	0.83	+0.3
3,633,340	-		AO353_16365	0.83	-0.9
3,633,402	+		AO353_16365	0.85	-0.3
3,633,402	+		AO353_16365	0.85	+1.6
3,633,402	+		AO353_16365	0.85	+1.0
3,633,402	+		AO353_16365	0.85	-0.7
3,633,402	+		AO353_16365	0.85	+1.3
3,633,402	+		AO353_16365	0.85	+0.7
3,633,402	+		AO353_16365	0.85	-1.0
3,633,402	+		AO353_16365	0.85	-0.7
3,633,402	+		AO353_16365	0.85	-1.2
3,633,402	+		AO353_16365	0.85	+1.2
3,633,403	-		AO353_16365	0.85	-1.0
3,633,403	-		AO353_16365	0.85	+0.3
3,633,403	-		AO353_16365	0.85	-1.8
3,633,403	-		AO353_16365	0.85	+1.0
3,633,403	-		AO353_16365	0.85	+1.6
3,633,403	-		AO353_16365	0.85	-0.3
3,633,403	-		AO353_16365	0.85	+2.3
3,633,571	+				-0.5
3,633,571	+				+3.0
3,633,572	-				-1.0
3,633,572	-				+0.7
3,633,572	-				+0.7
3,633,572	-				+3.7
3,633,572	-				-0.0
3,633,572	-				-1.7
3,633,670	+				-0.9
3,633,671	-				+0.3
3,633,809	+				+0.7
3,633,810	-				-0.5
3,633,810	-				-1.2
3,633,810	-				-0.3
3,633,859	+				-1.8
3,633,860	-				-1.8
3,633,942	-				-2.8
3,633,942	-				+1.4
3,633,947	+				-0.9
3,633,947	+				-1.3
3,633,985	+				-1.6
3,633,985	+				-0.3
3,633,985	+				-0.3
3,633,985	+				+1.7
3,633,986	-				+0.3
3,633,986	-				-1.0
3,633,992	+				-2.1
3,633,999	-				-0.7
3,634,033	+				-1.3
3,634,033	+				-2.3
3,634,034	-				+1.4
3,634,034	-				+0.7
3,634,034	-				-0.3
3,634,051	+				-0.5
3,634,052	-				-0.0
3,634,052	-				+0.7
3,634,052	-				+2.9
3,634,111	-				+1.6
3,634,149	+				+0.7
3,634,150	-				+2.1
3,634,150	-				-0.5
3,634,242	+		AO353_16370	0.16	-2.5
3,634,242	+		AO353_16370	0.16	-1.4
3,634,242	+		AO353_16370	0.16	-2.1
3,634,242	+		AO353_16370	0.16	+0.4
3,634,242	+		AO353_16370	0.16	-2.4
3,634,242	+		AO353_16370	0.16	+0.0
3,634,242	+		AO353_16370	0.16	-1.5
3,634,242	+		AO353_16370	0.16	-0.7
3,634,242	+		AO353_16370	0.16	-0.3
3,634,243	-		AO353_16370	0.16	+2.6
3,634,243	-		AO353_16370	0.16	+1.4
3,634,243	-		AO353_16370	0.16	-0.5
3,634,243	-		AO353_16370	0.16	-0.3
3,634,243	-		AO353_16370	0.16	+1.3
3,634,243	-		AO353_16370	0.16	-0.5
3,634,243	-		AO353_16370	0.16	-0.9
3,634,243	-		AO353_16370	0.16	+1.4
3,634,243	-		AO353_16370	0.16	+1.1
3,634,359	+		AO353_16370	0.24	+0.6
3,634,359	+		AO353_16370	0.24	-2.2
3,634,359	+		AO353_16370	0.24	+2.0
3,634,359	+		AO353_16370	0.24	+1.7
3,634,359	+		AO353_16370	0.24	-1.6
3,634,359	+		AO353_16370	0.24	+1.2
3,634,359	+		AO353_16370	0.24	+1.2
3,634,360	-		AO353_16370	0.24	+0.7
3,634,360	-		AO353_16370	0.24	-0.1
3,634,360	-		AO353_16370	0.24	+0.3
3,634,360	-		AO353_16370	0.24	-1.2
3,634,360	-		AO353_16370	0.24	+1.6
3,634,360	-		AO353_16370	0.24	-0.2
3,634,373	+		AO353_16370	0.25	-0.7
3,634,374	-		AO353_16370	0.25	-0.0
3,634,398	+		AO353_16370	0.27	-0.7
3,634,399	-		AO353_16370	0.27	+1.2
3,634,399	-		AO353_16370	0.27	-0.9
3,634,399	-		AO353_16370	0.27	-0.9
3,634,399	-		AO353_16370	0.27	+0.6
3,634,399	-		AO353_16370	0.27	-0.9
3,634,542	+		AO353_16370	0.38	-2.1
3,634,542	+		AO353_16370	0.38	-0.5
3,634,542	+		AO353_16370	0.38	+1.6
3,634,542	+		AO353_16370	0.38	-2.9
3,634,542	+		AO353_16370	0.38	+0.6
3,634,647	+		AO353_16370	0.45	+1.0
3,634,647	+		AO353_16370	0.45	-1.4
3,634,648	-		AO353_16370	0.46	-0.7
3,634,648	-		AO353_16370	0.46	-0.5
3,634,715	+		AO353_16370	0.50	+1.2
3,634,715	+		AO353_16370	0.50	-1.8
3,634,715	+		AO353_16370	0.50	+1.3
3,634,715	+		AO353_16370	0.50	-2.5
3,634,715	+		AO353_16370	0.50	+1.5
3,634,715	+		AO353_16370	0.50	-1.0
3,634,715	+		AO353_16370	0.50	-1.0
3,634,715	+		AO353_16370	0.50	-1.4
3,634,715	+		AO353_16370	0.50	-1.0
3,634,715	+		AO353_16370	0.50	-0.5
3,634,715	+		AO353_16370	0.50	+0.2
3,634,715	+		AO353_16370	0.50	-0.9
3,634,716	-		AO353_16370	0.51	+1.2
3,634,716	-		AO353_16370	0.51	-1.5
3,634,716	-		AO353_16370	0.51	+2.6
3,634,716	-		AO353_16370	0.51	+1.1
3,634,716	-		AO353_16370	0.51	+1.2
3,634,796	-		AO353_16370	0.56	-0.3
3,634,806	+		AO353_16370	0.57	+1.3
3,634,806	+		AO353_16370	0.57	-0.0
3,634,806	+		AO353_16370	0.57	-0.0
3,634,806	+		AO353_16370	0.57	+0.3
3,634,806	+		AO353_16370	0.57	+2.9
3,634,806	+		AO353_16370	0.57	+2.7
3,634,806	+		AO353_16370	0.57	+1.1
3,634,806	+		AO353_16370	0.57	+1.8
3,634,806	+		AO353_16370	0.57	+0.7
3,634,807	-		AO353_16370	0.57	+1.7
3,634,807	-		AO353_16370	0.57	-2.2
3,634,807	-		AO353_16370	0.57	-0.0
3,634,807	-		AO353_16370	0.57	+2.3
3,634,807	-		AO353_16370	0.57	-0.5
3,634,807	-		AO353_16370	0.57	-1.6
3,634,807	-		AO353_16370	0.57	-0.9
3,634,807	-		AO353_16370	0.57	-0.3
3,634,807	-		AO353_16370	0.57	+0.3
3,634,905	+		AO353_16370	0.65	+1.3
3,634,906	-		AO353_16370	0.65	+1.2
3,634,906	-		AO353_16370	0.65	-1.0
3,634,906	-		AO353_16370	0.65	-1.7
3,634,944	+		AO353_16370	0.67	+1.8
3,634,945	-		AO353_16370	0.67	+1.5
3,634,945	-		AO353_16370	0.67	-0.9
3,634,986	+		AO353_16370	0.71	+1.6
3,634,986	+		AO353_16370	0.71	-2.5
3,634,986	+		AO353_16370	0.71	+1.5
3,634,987	-		AO353_16370	0.71	-0.3
3,634,987	-		AO353_16370	0.71	+0.9
3,634,987	-		AO353_16370	0.71	+0.2
3,634,998	+		AO353_16370	0.71	+0.7
3,634,998	+		AO353_16370	0.71	+1.7
3,634,998	+		AO353_16370	0.71	-0.9
3,634,998	+		AO353_16370	0.71	+0.4
3,634,998	+		AO353_16370	0.71	-1.5
3,634,998	+		AO353_16370	0.71	+2.3
3,634,998	+		AO353_16370	0.71	+0.5
3,634,998	+		AO353_16370	0.71	-1.0
3,634,998	+		AO353_16370	0.71	+1.6
3,634,998	+		AO353_16370	0.71	+0.9
3,634,998	+		AO353_16370	0.71	+1.0
3,634,999	-		AO353_16370	0.71	-1.0
3,634,999	-		AO353_16370	0.71	+1.4
3,634,999	-		AO353_16370	0.71	-0.9
3,634,999	-		AO353_16370	0.71	-0.3
3,634,999	-		AO353_16370	0.71	-1.1
3,634,999	-		AO353_16370	0.71	-2.2
3,634,999	-		AO353_16370	0.71	-0.3
3,634,999	-		AO353_16370	0.71	+0.3
3,634,999	-		AO353_16370	0.71	-2.2
3,634,999	-		AO353_16370	0.71	+2.1
3,634,999	-		AO353_16370	0.71	-0.7
3,634,999	-		AO353_16370	0.71	-2.1
3,634,999	-		AO353_16370	0.71	-0.0
3,634,999	-		AO353_16370	0.71	-2.2
3,634,999	-		AO353_16370	0.71	+1.2
3,635,034	+		AO353_16370	0.74	+0.5
3,635,034	+		AO353_16370	0.74	-1.8
3,635,034	+		AO353_16370	0.74	-2.6
3,635,034	+		AO353_16370	0.74	-0.7
3,635,034	+		AO353_16370	0.74	+0.5
3,635,034	+		AO353_16370	0.74	-1.0
3,635,034	+		AO353_16370	0.74	-0.7
3,635,034	+		AO353_16370	0.74	-0.2
3,635,034	+		AO353_16370	0.74	-0.0
3,635,034	+		AO353_16370	0.74	-1.3
3,635,034	+		AO353_16370	0.74	+3.9
3,635,034	+		AO353_16370	0.74	-1.0
3,635,035	-		AO353_16370	0.74	+1.9
3,635,035	-		AO353_16370	0.74	-0.9
3,635,035	-		AO353_16370	0.74	+1.7
3,635,035	-		AO353_16370	0.74	+1.0
3,635,035	-		AO353_16370	0.74	-1.4
3,635,035	-		AO353_16370	0.74	-0.7
3,635,035	-		AO353_16370	0.74	-0.0
3,635,035	-		AO353_16370	0.74	-0.7
3,635,035	-		AO353_16370	0.74	-0.9
3,635,035	-		AO353_16370	0.74	-1.7
3,635,035	-		AO353_16370	0.74	+0.7
3,635,035	-		AO353_16370	0.74	-0.3
3,635,035	-		AO353_16370	0.74	-1.6
3,635,035	-		AO353_16370	0.74	-2.4
3,635,035	-		AO353_16370	0.74	-0.7
3,635,035	-		AO353_16370	0.74	-1.4
3,635,094	+		AO353_16370	0.78	+0.9
3,635,094	+		AO353_16370	0.78	-0.5
3,635,095	-		AO353_16370	0.79	-1.5
3,635,259	+				-2.0
3,635,259	+				-1.9
3,635,259	+				+1.2
3,635,259	+				+1.5
3,635,259	+				-2.7
3,635,260	-				-1.0
3,635,260	-				+0.3
3,635,260	-				+0.2
3,635,260	-				-1.7
3,635,382	+				-0.0
3,635,383	-				-0.3
3,635,383	-				+0.3
3,635,444	+				-0.5
3,635,444	+				-0.7
3,635,444	+				-2.0
3,635,445	-				-0.5
3,635,445	-				-1.7
3,635,445	-				-2.0
3,635,445	-				-0.0
3,635,614	+		AO353_16375	0.46	+0.7
3,635,615	-		AO353_16375	0.46	+3.1
3,635,615	-		AO353_16375	0.46	-1.0
3,635,705	+		AO353_16375	0.70	+1.8
3,635,706	-		AO353_16375	0.70	-1.2
3,635,836	-				-0.0
3,635,836	-				+0.3
3,635,850	+				+1.3
3,635,850	+				-2.0
3,635,867	+				-1.8
3,635,868	-				-1.9
3,636,065	+				-0.4
3,636,065	+				-1.3
3,636,107	+				-0.1
3,636,108	-				+0.4
3,636,114	-				-0.9
3,636,114	-				-3.0
3,636,166	+				-2.2
3,636,166	+				-0.9
3,636,166	+				+1.7
3,636,166	+				-0.9
3,636,167	-				-1.9
3,636,167	-				+0.5
3,636,167	-				+1.7
3,636,167	-				-2.5
3,636,203	+				-1.8
3,636,212	+				-1.9
3,636,236	+				+0.3
3,636,236	+				+1.3
3,636,237	-				-1.6
3,636,237	-				-0.9
3,636,355	+				+0.7
3,636,377	+				+1.5
3,636,378	-				-2.0