Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_14605

Experiment: Anaerobic, acetate donor; nitrate and iron

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Anaerobic, acetate donor; nitrate and iron
3,235,634	+		AO353_14595	0.59	-0.5
3,235,634	+		AO353_14595	0.59	+0.7
3,235,634	+		AO353_14595	0.59	+1.3
3,235,634	+		AO353_14595	0.59	+0.3
3,235,635	-		AO353_14595	0.59	-0.2
3,235,635	-		AO353_14595	0.59	-1.8
3,235,637	+		AO353_14595	0.59	-2.1
3,235,637	+		AO353_14595	0.59	-2.2
3,235,638	-		AO353_14595	0.59	+1.3
3,235,638	-		AO353_14595	0.59	-2.3
3,235,638	-		AO353_14595	0.59	-0.1
3,235,738	+		AO353_14595	0.75	-0.7
3,235,739	-		AO353_14595	0.75	-0.7
3,235,739	-		AO353_14595	0.75	+1.2
3,235,739	-		AO353_14595	0.75	-1.9
3,235,739	-		AO353_14595	0.75	-0.5
3,235,739	-		AO353_14595	0.75	-1.1
3,235,744	+		AO353_14595	0.76	-1.2
3,235,744	+		AO353_14595	0.76	-1.3
3,235,744	+		AO353_14595	0.76	+0.7
3,235,744	+		AO353_14595	0.76	-0.3
3,235,745	-		AO353_14595	0.76	+1.9
3,235,745	-		AO353_14595	0.76	+2.7
3,235,745	-		AO353_14595	0.76	+0.8
3,235,745	-		AO353_14595	0.76	+2.3
3,235,745	-		AO353_14595	0.76	-0.3
3,235,799	+		AO353_14595	0.84	+1.1
3,235,799	+		AO353_14595	0.84	-0.1
3,235,800	-		AO353_14595	0.84	+0.7
3,235,800	-		AO353_14595	0.84	+4.6
3,235,898	+				-0.1
3,235,898	+				-0.5
3,235,898	+				-2.1
3,235,899	-				-0.7
3,235,899	-				-1.2
3,235,899	-				-0.7
3,235,899	-				+5.1
3,235,921	-				-2.2
3,235,930	+				-1.5
3,235,930	+				-1.5
3,235,930	+				+1.3
3,235,931	-				-0.1
3,235,931	-				-0.1
3,235,931	-				-1.2
3,236,067	+		AO353_14600	0.28	-0.3
3,236,067	+		AO353_14600	0.28	-0.3
3,236,067	+		AO353_14600	0.28	+0.1
3,236,067	+		AO353_14600	0.28	-0.9
3,236,114	+		AO353_14600	0.37	-0.3
3,236,115	-		AO353_14600	0.37	-1.2
3,236,146	+		AO353_14600	0.43	-1.2
3,236,146	+		AO353_14600	0.43	+1.3
3,236,147	-		AO353_14600	0.43	+1.5
3,236,169	-		AO353_14600	0.47	+2.8
3,236,169	-		AO353_14600	0.47	-2.7
3,236,169	-		AO353_14600	0.47	+0.6
3,236,190	+		AO353_14600	0.51	-0.3
3,236,191	-		AO353_14600	0.52	-0.1
3,236,191	-		AO353_14600	0.52	+2.3
3,236,191	-		AO353_14600	0.52	-0.5
3,236,222	-		AO353_14600	0.57	-1.4
3,236,222	-		AO353_14600	0.57	-1.4
3,236,266	+		AO353_14600	0.66	+1.0
3,236,266	+		AO353_14600	0.66	+0.4
3,236,266	+		AO353_14600	0.66	+0.3
3,236,266	+		AO353_14600	0.66	+1.3
3,236,266	+		AO353_14600	0.66	-0.1
3,236,267	-		AO353_14600	0.66	+0.8
3,236,267	-		AO353_14600	0.66	-0.3
3,236,267	-		AO353_14600	0.66	+0.4
3,236,267	-		AO353_14600	0.66	-1.1
3,236,267	-		AO353_14600	0.66	+3.1
3,236,267	-		AO353_14600	0.66	+0.3
3,236,267	-		AO353_14600	0.66	-1.6
3,236,283	+		AO353_14600	0.69	-2.4
3,236,283	+		AO353_14600	0.69	+1.7
3,236,283	+		AO353_14600	0.69	-0.7
3,236,284	-		AO353_14600	0.69	-0.7
3,236,284	-		AO353_14600	0.69	-2.7
3,236,284	-		AO353_14600	0.69	+1.4
3,236,333	-		AO353_14600	0.79	-0.2
3,236,333	-		AO353_14600	0.79	-1.2
3,236,413	+				-1.7
3,236,413	+				-0.3
3,236,413	+				+1.2
3,236,413	+				+0.2
3,236,413	+				-1.2
3,236,413	+				-1.3
3,236,413	+				+0.7
3,236,413	+				-1.3
3,236,413	+				-0.9
3,236,413	+				+1.3
3,236,413	+				+0.9
3,236,413	+				-0.2
3,236,413	+				+1.1
3,236,414	-				+0.7
3,236,414	-				+0.9
3,236,414	-				+0.8
3,236,414	-				-2.3
3,236,414	-				-1.4
3,236,414	-				-0.5
3,236,414	-				-0.5
3,236,515	-				-1.1
3,236,520	+				-2.4
3,236,550	+				+0.3
3,236,550	+				-2.1
3,236,550	+				-0.5
3,236,550	+				+1.3
3,236,550	+				+1.4
3,236,550	+				+1.9
3,236,550	+				-1.1
3,236,551	-				-0.9
3,236,551	-				-1.1
3,236,599	-				+3.0
3,236,599	-				+0.3
3,236,599	-				+1.9
3,236,599	-				-0.7
3,236,602	+				+0.1
3,236,602	+				-1.6
3,236,602	+				-0.3
3,236,602	+				-2.1
3,236,602	+				-1.3
3,236,602	+				-1.7
3,236,603	-				+0.3
3,236,603	-				-0.3
3,236,603	-				-1.1
3,236,603	-				+0.3
3,236,603	-				+2.3
3,236,603	-				-0.5
3,236,603	-				-0.1
3,236,603	-				-3.0
3,236,603	-				-1.9
3,236,603	-				+1.6
3,236,603	-				-1.5
3,236,627	+				+1.8
3,236,627	+				-1.2
3,236,628	-				-0.9
3,236,628	-				+0.6
3,236,628	-				+0.3
3,236,640	+				+0.7
3,236,640	+				+0.8
3,236,640	+				-1.1
3,236,640	+				+2.1
3,236,640	+				-0.2
3,236,641	-				-2.7
3,236,641	-				+2.7
3,236,641	-				-0.5
3,236,641	-				-0.2
3,236,641	-				+0.8
3,236,641	-				-0.5
3,236,641	-				+2.0
3,236,659	+				+1.6
3,236,659	+				-0.3
3,236,747	+		AO353_14605	0.10	-1.8
3,236,747	+		AO353_14605	0.10	+0.1
3,236,747	+		AO353_14605	0.10	+1.5
3,236,747	+		AO353_14605	0.10	+1.6
3,236,747	+		AO353_14605	0.10	+1.8
3,236,747	+		AO353_14605	0.10	+2.5
3,236,748	-		AO353_14605	0.10	-0.7
3,236,748	-		AO353_14605	0.10	+1.7
3,236,927	+		AO353_14605	0.26	+1.4
3,236,928	-		AO353_14605	0.26	-0.5
3,236,957	+		AO353_14605	0.28	+2.7
3,236,957	+		AO353_14605	0.28	-0.1
3,236,957	+		AO353_14605	0.28	+2.1
3,236,957	+		AO353_14605	0.28	+2.3
3,236,957	+		AO353_14605	0.28	+0.9
3,236,958	-		AO353_14605	0.28	-0.5
3,236,970	+		AO353_14605	0.29	-0.0
3,236,970	+		AO353_14605	0.29	-0.3
3,236,970	+		AO353_14605	0.29	+2.6
3,236,971	-		AO353_14605	0.30	+0.8
3,237,047	+		AO353_14605	0.36	-1.7
3,237,047	+		AO353_14605	0.36	-0.7
3,237,048	-		AO353_14605	0.36	+1.0
3,237,162	-		AO353_14605	0.46	+3.6
3,237,237	-		AO353_14605	0.52	+3.3
3,237,237	-		AO353_14605	0.52	-0.5
3,237,277	+		AO353_14605	0.56	+0.8
3,237,277	+		AO353_14605	0.56	+0.7
3,237,278	-		AO353_14605	0.56	-0.4
3,237,314	+		AO353_14605	0.59	-0.3
3,237,314	+		AO353_14605	0.59	+0.2
3,237,314	+		AO353_14605	0.59	+1.5
3,237,314	+		AO353_14605	0.59	-2.0
3,237,314	+		AO353_14605	0.59	+2.6
3,237,314	+		AO353_14605	0.59	+2.4
3,237,314	+		AO353_14605	0.59	+2.4
3,237,314	+		AO353_14605	0.59	+1.7
3,237,314	+		AO353_14605	0.59	+1.0
3,237,314	+		AO353_14605	0.59	+1.3
3,237,315	-		AO353_14605	0.59	+2.1
3,237,338	+		AO353_14605	0.61	+0.6
3,237,339	-		AO353_14605	0.61	+1.4
3,237,339	-		AO353_14605	0.61	+0.3
3,237,339	-		AO353_14605	0.61	+1.4
3,237,339	-		AO353_14605	0.61	+0.6
3,237,339	-		AO353_14605	0.61	-0.1
3,237,411	-		AO353_14605	0.67	-0.1
3,237,419	+		AO353_14605	0.68	+4.6
3,237,419	+		AO353_14605	0.68	+2.0
3,237,419	+		AO353_14605	0.68	+2.7
3,237,419	+		AO353_14605	0.68	+1.3
3,237,419	+		AO353_14605	0.68	+1.1
3,237,419	+		AO353_14605	0.68	+3.1
3,237,419	+		AO353_14605	0.68	+0.8
3,237,420	-		AO353_14605	0.68	+1.6
3,237,420	-		AO353_14605	0.68	-0.5
3,237,420	-		AO353_14605	0.68	+1.8
3,237,420	-		AO353_14605	0.68	+1.3
3,237,420	-		AO353_14605	0.68	+0.8
3,237,420	-		AO353_14605	0.68	+1.3
3,237,420	-		AO353_14605	0.68	-1.4
3,237,420	-		AO353_14605	0.68	-0.3
3,237,536	+		AO353_14605	0.78	-0.1
3,237,559	+		AO353_14605	0.80	+0.5
3,237,559	+		AO353_14605	0.80	-1.6
3,237,560	-		AO353_14605	0.80	+1.9
3,237,560	-		AO353_14605	0.80	-0.3
3,237,581	+		AO353_14605	0.82	-0.3
3,237,611	+		AO353_14605	0.84	+1.1
3,237,611	+		AO353_14605	0.84	-1.8
3,237,611	+		AO353_14605	0.84	-0.1
3,237,612	-		AO353_14605	0.84	+0.7
3,237,612	-		AO353_14605	0.84	-0.3
3,237,612	-		AO353_14605	0.84	+2.7
3,237,750	+				+2.1
3,237,751	-				-3.5
3,237,751	-				+0.7
3,237,836	+				-0.1
3,237,836	+				+2.1
3,237,836	+				-0.3
3,237,836	+				+1.1
3,237,836	+				+3.5
3,237,837	-				-0.7
3,237,837	-				+0.5
3,237,840	+				-0.7
3,237,840	+				+3.8
3,237,840	+				+4.5
3,237,840	+				-0.3
3,237,840	+				+0.3
3,237,841	-				+1.4
3,237,841	-				-0.3
3,237,841	-				-1.2
3,237,841	-				-3.2
3,237,841	-				-0.5
3,237,841	-				+2.5
3,237,861	+				+3.2
3,237,861	+				+2.4
3,237,861	+				-1.5
3,237,861	+				+3.7
3,237,861	+				+3.3
3,237,861	+				+2.2
3,237,861	+				+1.9
3,237,861	+				+0.7
3,237,862	-				-0.2
3,237,862	-				-0.5
3,237,862	-				+3.3
3,237,862	-				-1.1
3,237,862	-				-0.5
3,237,867	+				+2.6
3,237,867	+				+2.5
3,237,867	+				+0.2
3,237,867	+				-1.5
3,237,867	+				+1.8
3,237,867	+				+0.3
3,237,867	+				-0.9
3,237,867	+				+1.0
3,237,867	+				+0.4
3,237,867	+				-0.5
3,237,868	-				-0.1
3,237,868	-				+2.8
3,237,868	-				+2.2
3,237,868	-				-0.1
3,237,868	-				-1.4
3,237,868	-				+0.8
3,237,868	-				+2.8
3,237,868	-				-2.2
3,237,868	-				+2.7
3,237,868	-				+0.7
3,237,868	-				-1.4
3,237,870	+				+1.0
3,237,871	-				-0.9
3,238,026	-				+2.3
3,238,050	+				+0.7
3,238,050	+				+1.3
3,238,050	+				+0.8
3,238,051	-				-0.5
3,238,070	-				+2.1
3,238,070	-				+0.8
3,238,187	+		AO353_14610	0.17	-0.7
3,238,246	+		AO353_14610	0.20	-0.1
3,238,275	+		AO353_14610	0.22	+0.5
3,238,311	+		AO353_14610	0.24	-1.6
3,238,311	+		AO353_14610	0.24	-1.9
3,238,311	+		AO353_14610	0.24	-0.6
3,238,312	-		AO353_14610	0.24	-0.9
3,238,312	-		AO353_14610	0.24	-0.3
3,238,312	-		AO353_14610	0.24	+0.3
3,238,312	-		AO353_14610	0.24	-1.5
3,238,312	-		AO353_14610	0.24	-1.4
3,238,405	+		AO353_14610	0.29	-1.3
3,238,405	+		AO353_14610	0.29	+1.3
3,238,446	+		AO353_14610	0.32	-0.1
3,238,446	+		AO353_14610	0.32	+0.6
3,238,446	+		AO353_14610	0.32	+0.6
3,238,446	+		AO353_14610	0.32	+2.7
3,238,446	+		AO353_14610	0.32	-1.8
3,238,446	+		AO353_14610	0.32	-0.5
3,238,446	+		AO353_14610	0.32	-0.9
3,238,446	+		AO353_14610	0.32	-0.5
3,238,446	+		AO353_14610	0.32	+2.8
3,238,446	+		AO353_14610	0.32	-1.3
3,238,446	+		AO353_14610	0.32	+1.0
3,238,446	+		AO353_14610	0.32	-1.3
3,238,447	-		AO353_14610	0.32	+0.8
3,238,447	-		AO353_14610	0.32	-1.2
3,238,447	-		AO353_14610	0.32	+1.0
3,238,447	-		AO353_14610	0.32	+1.3
3,238,467	+		AO353_14610	0.33	+1.0
3,238,468	-		AO353_14610	0.33	+1.7
3,238,619	+		AO353_14610	0.42	-2.0
3,238,619	+		AO353_14610	0.42	+1.9
3,238,620	-		AO353_14610	0.42	+0.3
3,238,620	-		AO353_14610	0.42	-0.1
3,238,620	-		AO353_14610	0.42	-2.3
3,238,620	-		AO353_14610	0.42	-1.1
3,238,635	+		AO353_14610	0.43	-0.3
3,238,635	+		AO353_14610	0.43	-2.0