Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_06830

Experiment: Anaerobic, acetate donor; nitrate and iron

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Anaerobic, acetate donor; nitrate and iron
1,516,852	+		AO353_06815	0.90	-0.1
1,516,852	+		AO353_06815	0.90	+2.8
1,516,852	+				+0.2
1,516,852	+		AO353_06815	0.90	+0.7
1,516,853	-				-1.2
1,516,853	-				-1.3
1,516,853	-				-0.8
1,516,853	-				+1.2
1,516,866	+				+1.2
1,516,866	+				+0.7
1,516,894	+				-0.1
1,516,894	+				+0.9
1,516,894	+				+1.5
1,516,894	+				-1.6
1,516,894	+				+0.8
1,516,895	-				+3.1
1,516,895	-				-1.3
1,516,895	-				-1.1
1,516,895	-				-1.6
1,516,895	-				-1.5
1,516,895	-				+0.2
1,516,907	+				+0.2
1,516,944	-				-0.6
1,516,944	-				+2.7
1,517,002	+				-3.0
1,517,002	+				-1.1
1,517,003	-				-0.1
1,517,003	-				-0.6
1,517,010	+		AO353_06820	0.13	-0.6
1,517,010	+		AO353_06820	0.13	+2.4
1,517,010	+		AO353_06820	0.13	-1.9
1,517,010	+		AO353_06820	0.13	+3.5
1,517,010	+		AO353_06820	0.13	-1.9
1,517,010	+		AO353_06820	0.13	-0.7
1,517,010	+		AO353_06820	0.13	+0.7
1,517,010	+		AO353_06820	0.13	-0.9
1,517,010	+		AO353_06820	0.13	-0.8
1,517,011	-		AO353_06820	0.13	+1.8
1,517,011	-		AO353_06820	0.13	-2.2
1,517,011	-		AO353_06820	0.13	-1.6
1,517,011	-		AO353_06820	0.13	-0.3
1,517,011	-		AO353_06820	0.13	+2.7
1,517,011	-		AO353_06820	0.13	+2.6
1,517,011	-		AO353_06820	0.13	-1.5
1,517,011	-		AO353_06820	0.13	-0.3
1,517,011	-		AO353_06820	0.13	-1.8
1,517,011	-		AO353_06820	0.13	+1.6
1,517,011	-		AO353_06820	0.13	+0.9
1,517,011	-		AO353_06820	0.13	+0.7
1,517,068	+		AO353_06820	0.40	+0.7
1,517,110	+		AO353_06820	0.60	-1.1
1,517,110	+		AO353_06820	0.60	-3.5
1,517,111	-		AO353_06820	0.60	+1.2
1,517,134	+		AO353_06820	0.71	+1.2
1,517,134	+		AO353_06820	0.71	-0.1
1,517,135	-		AO353_06820	0.71	-0.7
1,517,168	-		AO353_06820	0.87	-0.3
1,517,292	+		AO353_06825	0.17	-0.3
1,517,292	+		AO353_06825	0.17	+1.2
1,517,292	+		AO353_06825	0.17	+0.1
1,517,401	+		AO353_06825	0.34	-0.6
1,517,402	-		AO353_06825	0.34	-1.3
1,517,404	+		AO353_06825	0.34	+0.2
1,517,404	+		AO353_06825	0.34	+1.6
1,517,404	+		AO353_06825	0.34	+2.2
1,517,404	+		AO353_06825	0.34	+0.2
1,517,404	+		AO353_06825	0.34	-1.6
1,517,404	+		AO353_06825	0.34	+2.1
1,517,404	+		AO353_06825	0.34	+1.8
1,517,404	+		AO353_06825	0.34	+1.2
1,517,404	+		AO353_06825	0.34	-0.9
1,517,404	+		AO353_06825	0.34	-1.3
1,517,404	+		AO353_06825	0.34	-0.8
1,517,404	+		AO353_06825	0.34	+0.1
1,517,404	+		AO353_06825	0.34	+1.2
1,517,404	+		AO353_06825	0.34	+0.2
1,517,405	-		AO353_06825	0.34	-0.1
1,517,405	-		AO353_06825	0.34	-0.6
1,517,405	-		AO353_06825	0.34	-0.3
1,517,405	-		AO353_06825	0.34	+1.2
1,517,405	-		AO353_06825	0.34	+1.7
1,517,405	-		AO353_06825	0.34	+3.7
1,517,405	-		AO353_06825	0.34	+1.8
1,517,405	-		AO353_06825	0.34	-0.8
1,517,405	-				+1.2
1,517,405	-		AO353_06825	0.34	+1.4
1,517,405	-		AO353_06825	0.34	+0.2
1,517,405	-		AO353_06825	0.34	+0.5
1,517,405	-		AO353_06825	0.34	-2.0
1,517,405	-		AO353_06825	0.34	+0.2
1,517,439	+		AO353_06825	0.39	-0.6
1,517,439	+		AO353_06825	0.39	-0.3
1,517,439	+		AO353_06825	0.39	+0.9
1,517,439	+		AO353_06825	0.39	-0.8
1,517,439	+		AO353_06825	0.39	-1.8
1,517,440	-		AO353_06825	0.40	-0.8
1,517,440	-		AO353_06825	0.40	-1.2
1,517,440	-		AO353_06825	0.40	-2.3
1,517,440	-		AO353_06825	0.40	-0.2
1,517,488	+		AO353_06825	0.47	-2.1
1,517,489	-		AO353_06825	0.47	-0.7
1,517,489	-		AO353_06825	0.47	+0.2
1,517,497	+		AO353_06825	0.48	+2.5
1,517,497	+		AO353_06825	0.48	-1.2
1,517,497	+		AO353_06825	0.48	-0.6
1,517,497	+		AO353_06825	0.48	-1.9
1,517,497	+		AO353_06825	0.48	+2.7
1,517,497	+		AO353_06825	0.48	+0.7
1,517,497	+		AO353_06825	0.48	-1.1
1,517,498	-		AO353_06825	0.49	+2.2
1,517,498	-		AO353_06825	0.49	+0.1
1,517,498	-		AO353_06825	0.49	+1.1
1,517,498	-		AO353_06825	0.49	-2.2
1,517,498	-		AO353_06825	0.49	-0.3
1,517,498	-		AO353_06825	0.49	-0.3
1,517,498	-		AO353_06825	0.49	-2.5
1,517,498	-		AO353_06825	0.49	-0.9
1,517,498	-		AO353_06825	0.49	+2.2
1,517,498	-		AO353_06825	0.49	+0.2
1,517,498	-		AO353_06825	0.49	-0.3
1,517,498	-		AO353_06825	0.49	+2.2
1,517,498	-		AO353_06825	0.49	-0.7
1,517,569	+		AO353_06825	0.59	-2.3
1,517,569	+		AO353_06825	0.59	-1.8
1,517,569	+		AO353_06825	0.59	+0.2
1,517,569	+		AO353_06825	0.59	+0.7
1,517,569	+		AO353_06825	0.59	-0.3
1,517,570	-		AO353_06825	0.60	-1.1
1,517,570	-		AO353_06825	0.60	+1.4
1,517,570	-		AO353_06825	0.60	+0.2
1,517,570	-		AO353_06825	0.60	+0.4
1,517,570	-		AO353_06825	0.60	-0.3
1,517,570	-		AO353_06825	0.60	-0.3
1,517,570	-		AO353_06825	0.60	-0.6
1,517,570	-		AO353_06825	0.60	+1.6
1,517,570	-		AO353_06825	0.60	-0.8
1,517,671	+		AO353_06825	0.75	+1.4
1,517,671	+		AO353_06825	0.75	-0.2
1,517,672	-		AO353_06825	0.75	-2.3
1,517,672	-		AO353_06825	0.75	-2.5
1,517,672	-		AO353_06825	0.75	+1.1
1,517,699	-		AO353_06825	0.79	+0.7
1,517,699	-		AO353_06825	0.79	+1.2
1,517,797	-				+3.7
1,517,806	+				-1.7
1,517,806	+				-0.1
1,517,807	-				-1.1
1,517,807	-				+2.6
1,517,807	-				-0.9
1,517,807	-				-1.7
1,517,807	-				-2.6
1,517,807	-				-0.8
1,517,807	-				-0.9
1,517,823	+				-0.6
1,517,823	+				-1.1
1,517,823	+				-2.2
1,517,823	+				+1.4
1,517,824	-				-2.1
1,517,824	-				+1.0
1,517,824	-				-0.6
1,517,824	-				+0.6
1,517,830	+				-1.8
1,517,830	+				-0.8
1,517,831	-				+0.2
1,517,850	+				+1.2
1,517,850	+				-1.2
1,517,850	+				+0.7
1,517,850	+				+1.4
1,517,850	+				-1.1
1,517,851	-				-1.2
1,517,851	-				+0.0
1,517,851	-				+5.2
1,517,903	+		AO353_06830	0.13	+2.2
1,517,903	+		AO353_06830	0.13	-0.9
1,517,903	+		AO353_06830	0.13	-3.3
1,517,903	+		AO353_06830	0.13	-1.6
1,517,903	+		AO353_06830	0.13	-2.3
1,517,903	+		AO353_06830	0.13	+0.7
1,517,903	+		AO353_06830	0.13	-1.5
1,517,904	-		AO353_06830	0.14	-2.6
1,517,904	-		AO353_06830	0.14	-0.6
1,517,904	-		AO353_06830	0.14	+0.2
1,517,904	-		AO353_06830	0.14	-1.6
1,517,904	-		AO353_06830	0.14	-1.8
1,517,904	-		AO353_06830	0.14	-0.3
1,517,904	-		AO353_06830	0.14	+2.7
1,517,904	-		AO353_06830	0.14	+0.5
1,517,948	+		AO353_06830	0.24	-1.7
1,517,949	-		AO353_06830	0.24	+0.7
1,517,949	-		AO353_06830	0.24	-1.1
1,518,068	+		AO353_06830	0.52	-1.1
1,518,069	-		AO353_06830	0.52	+0.7
1,518,069	-		AO353_06830	0.52	-1.2
1,518,158	-		AO353_06830	0.73	-0.1
1,518,206	+		AO353_06830	0.84	+0.1
1,518,206	+		AO353_06830	0.84	-0.9
1,518,206	+		AO353_06830	0.84	-0.8
1,518,207	-		AO353_06830	0.84	+1.5
1,518,207	-		AO353_06830	0.84	-0.8
1,518,207	-		AO353_06830	0.84	-2.8
1,518,207	-		AO353_06830	0.84	+1.7
1,518,207	-		AO353_06830	0.84	-1.2
1,518,309	+				-2.0
1,518,309	+				-0.1
1,518,309	+				-1.1
1,518,309	+				+0.7
1,518,309	+				+0.5
1,518,309	+				+0.2
1,518,309	+				-1.6
1,518,309	+				+1.2
1,518,310	-				+0.9
1,518,310	-				-0.3
1,518,310	-				+2.1
1,518,310	-				-0.8
1,518,378	+		AO353_06835	0.12	-1.1
1,518,379	-		AO353_06835	0.12	-0.4
1,518,462	+		AO353_06835	0.23	-2.5
1,518,462	+		AO353_06835	0.23	+1.8
1,518,462	+		AO353_06835	0.23	-0.6
1,518,462	+		AO353_06835	0.23	+3.1
1,518,462	+		AO353_06835	0.23	-0.3
1,518,462	+		AO353_06835	0.23	-1.8
1,518,463	-		AO353_06835	0.23	+0.6
1,518,463	-		AO353_06835	0.23	-0.1
1,518,463	-		AO353_06835	0.23	+2.5
1,518,504	+		AO353_06835	0.29	+0.7
1,518,504	+		AO353_06835	0.29	-1.1
1,518,504	+		AO353_06835	0.29	+1.0
1,518,504	+		AO353_06835	0.29	+1.4
1,518,505	-		AO353_06835	0.29	+1.4
1,518,505	-		AO353_06835	0.29	-1.8
1,518,505	-		AO353_06835	0.29	-1.5
1,518,505	-		AO353_06835	0.29	-1.4
1,518,756	+		AO353_06835	0.63	+2.1
1,518,756	+		AO353_06835	0.63	-0.9
1,518,756	+		AO353_06835	0.63	+2.6
1,518,756	+		AO353_06835	0.63	-1.5
1,518,756	+		AO353_06835	0.63	-0.9
1,518,756	+		AO353_06835	0.63	+0.9
1,518,757	-		AO353_06835	0.64	-1.5
1,518,757	-		AO353_06835	0.64	-0.8
1,518,757	-		AO353_06835	0.64	+1.1
1,518,757	-		AO353_06835	0.64	+1.2
1,518,757	-		AO353_06835	0.64	-0.3
1,518,757	-		AO353_06835	0.64	-2.7
1,518,801	+		AO353_06835	0.70	-2.0
1,518,801	+		AO353_06835	0.70	-0.3
1,518,802	-		AO353_06835	0.70	-2.4
1,518,802	-		AO353_06835	0.70	-0.8
1,518,802	-		AO353_06835	0.70	+2.0
1,518,870	+		AO353_06835	0.79	+1.2
1,518,871	-		AO353_06835	0.79	-0.9
1,518,871	-		AO353_06835	0.79	-2.8
1,518,871	-		AO353_06835	0.79	-2.1
1,518,871	-		AO353_06835	0.79	-0.7
1,518,871	-		AO353_06835	0.79	-0.3
1,518,893	+		AO353_06835	0.82	+0.3
1,518,893	+		AO353_06835	0.82	-0.9
1,518,893	+		AO353_06835	0.82	+3.1
1,518,894	-		AO353_06835	0.82	-1.1
1,518,894	-		AO353_06835	0.82	-1.8
1,518,894	-		AO353_06835	0.82	-0.9
1,518,894	-		AO353_06835	0.82	-2.6
1,518,894	-		AO353_06835	0.82	+2.5
1,519,021	-				-0.6
1,519,143	+				-1.8
1,519,144	-				+2.4
1,519,144	-				-0.3
1,519,146	+				-2.6
1,519,146	+				-0.9
1,519,146	+				-0.1
1,519,147	-				-0.8