Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_77

Experiment: Nitrate reduction, replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate B
118,680	-		Pf6N2E2_76	0.46	+1.5
119,481	+				-0.3
119,482	-				-1.9
119,482	-				-3.2
119,676	+		Pf6N2E2_77	0.10	-1.5
119,687	-		Pf6N2E2_77	0.11	-1.9
119,687	-		Pf6N2E2_77	0.11	-0.8
119,687	-		Pf6N2E2_77	0.11	-3.4
119,944	+		Pf6N2E2_77	0.32	+0.5
119,945	-		Pf6N2E2_77	0.33	-1.9
119,974	+		Pf6N2E2_77	0.35	-0.8
120,024	+		Pf6N2E2_77	0.39	-2.5
120,439	+		Pf6N2E2_77	0.73	-2.4
121,092	+		Pf6N2E2_78	0.43	-1.2
121,159	-		Pf6N2E2_78	0.52	-0.2
121,236	+		Pf6N2E2_78	0.62	-0.2
121,236	+		Pf6N2E2_78	0.62	-0.1
121,237	-		Pf6N2E2_78	0.62	+0.1
121,237	-		Pf6N2E2_78	0.62	-0.3
121,412	-		Pf6N2E2_78	0.84	+0.3
121,421	-		Pf6N2E2_78	0.86	-0.9
121,524	+				+1.3
121,524	+				+0.9
121,525	-				+0.5
121,525	-				+0.1
121,525	-				-0.5
121,572	+				-0.8
121,572	+				+1.1
121,573	-				+1.5
121,598	+				-0.1
121,599	-				+1.5
121,658	-				+0.4
121,734	+		Pf6N2E2_6100	0.45	+0.8
121,734	+		Pf6N2E2_6100	0.45	-1.8