Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3968

Experiment: Nitrate reduction, replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate B
4,613,617	-		Pf6N2E2_3967	0.57	+0.3
4,613,838	+		Pf6N2E2_3967	0.68	+0.7
4,613,838	+		Pf6N2E2_3967	0.68	-0.9
4,613,838	+		Pf6N2E2_3967	0.68	+1.0
4,613,838	+		Pf6N2E2_3967	0.68	+0.0
4,613,838	+		Pf6N2E2_3967	0.68	-0.3
4,613,839	-		Pf6N2E2_3967	0.68	+0.3
4,613,839	-		Pf6N2E2_3967	0.68	+0.4
4,613,839	-		Pf6N2E2_3967	0.68	-0.7
4,613,839	-		Pf6N2E2_3967	0.68	-1.5
4,614,162	+		Pf6N2E2_3967	0.83	-1.2
4,614,162	+		Pf6N2E2_3967	0.83	+1.1
4,614,162	+		Pf6N2E2_3967	0.83	-0.9
4,614,163	-		Pf6N2E2_3967	0.83	-0.3
4,614,163	-		Pf6N2E2_3967	0.83	+0.9
4,614,163	-		Pf6N2E2_3967	0.83	+0.3
4,614,219	+		Pf6N2E2_3967	0.86	-0.1
4,614,219	+		Pf6N2E2_3967	0.86	-0.8
4,614,219	+		Pf6N2E2_3967	0.86	+0.1
4,614,219	+		Pf6N2E2_3967	0.86	-0.6
4,614,219	+		Pf6N2E2_3967	0.86	-0.2
4,614,219	+		Pf6N2E2_3967	0.86	+1.1
4,614,409	-				-0.1
4,614,514	+				+0.1
4,614,514	+				-0.1
4,614,515	-				-1.1
4,614,522	+				+0.3
4,614,523	-				-0.2
4,614,523	-				+0.1
4,614,523	-				-0.3
4,614,563	-				+1.8
4,614,563	-				+0.3
4,614,803	+		Pf6N2E2_3968	0.22	+1.4
4,614,894	+		Pf6N2E2_3968	0.29	+0.6
4,614,894	+		Pf6N2E2_3968	0.29	+1.2
4,614,895	-		Pf6N2E2_3968	0.29	+1.7
4,614,895	-		Pf6N2E2_3968	0.29	-0.7
4,614,895	-		Pf6N2E2_3968	0.29	-1.4
4,614,895	-		Pf6N2E2_3968	0.29	+0.5
4,614,952	+		Pf6N2E2_3968	0.33	+0.1
4,614,952	+		Pf6N2E2_3968	0.33	-0.1
4,614,952	+		Pf6N2E2_3968	0.33	+0.8
4,614,952	+		Pf6N2E2_3968	0.33	-0.4
4,614,953	-		Pf6N2E2_3968	0.33	-0.4
4,615,369	+		Pf6N2E2_3968	0.65	-0.2
4,615,370	-		Pf6N2E2_3968	0.65	+0.4
4,615,370	-		Pf6N2E2_3968	0.65	+0.2
4,615,370	-		Pf6N2E2_3968	0.65	+0.0
4,615,370	-		Pf6N2E2_3968	0.65	-0.4
4,615,370	-		Pf6N2E2_3968	0.65	+0.0
4,615,370	-		Pf6N2E2_3968	0.65	+0.6
4,615,370	-		Pf6N2E2_3968	0.65	+0.3
4,615,370	-		Pf6N2E2_3968	0.65	+0.6
4,615,370	-		Pf6N2E2_3968	0.65	-0.2
4,615,437	+		Pf6N2E2_3968	0.70	+0.4
4,615,437	+		Pf6N2E2_3968	0.70	+0.9
4,615,437	+		Pf6N2E2_3968	0.70	+0.4
4,615,438	-		Pf6N2E2_3968	0.70	+1.4
4,615,732	+				+0.1
4,615,732	+				-0.0
4,615,751	+				-0.8
4,615,855	+				+0.0
4,615,856	-				+0.3
4,616,112	+		Pf6N2E2_3969	0.44	+2.4
4,616,188	-		Pf6N2E2_3969	0.56	+0.5
4,616,567	+				-0.6
4,616,568	-				-0.5
4,616,593	+				-0.1
4,616,594	-				+0.1
4,616,594	-				-0.2
4,616,616	-				-0.4
4,616,640	+				-0.4
4,616,640	+				-0.5
4,616,640	+				+1.4
4,616,641	-				-0.4
4,616,641	-				+1.4
4,616,652	-				+0.4
4,616,655	+				+0.2
4,616,656	-				+0.2
4,616,656	-				+0.2
4,616,743	+				+0.1
4,616,743	+				+0.5
4,616,753	+				-0.7
4,616,754	-				-0.2
4,616,754	-				+2.6
4,616,764	-				+1.4
4,616,764	-				-0.4
4,616,764	-				-0.3
4,616,827	-				+0.1