Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2737

Experiment: Nitrate reduction, replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate B
3,228,050	+		Pf6N2E2_2735	0.72	+0.2
3,228,051	-		Pf6N2E2_2735	0.72	+0.3
3,228,079	+		Pf6N2E2_2735	0.74	+0.3
3,228,131	+		Pf6N2E2_2735	0.76	+1.1
3,228,132	-		Pf6N2E2_2735	0.76	+0.3
3,228,132	-		Pf6N2E2_2735	0.76	-0.9
3,228,132	-		Pf6N2E2_2735	0.76	+0.7
3,228,425	+				+0.7
3,228,426	-				-0.8
3,228,488	+				-1.4
3,228,488	+				-0.4
3,228,488	+				-0.3
3,228,488	+				+0.3
3,228,488	+				+0.5
3,228,489	-				+0.3
3,228,489	-				-0.5
3,228,489	-				+1.5
3,228,707	-		Pf6N2E2_2736	0.21	-3.0
3,228,825	+		Pf6N2E2_2736	0.52	+0.7
3,228,825	+		Pf6N2E2_2736	0.52	-0.6
3,228,826	-		Pf6N2E2_2736	0.52	-0.1
3,228,939	+		Pf6N2E2_2736	0.81	-0.5
3,228,940	-		Pf6N2E2_2736	0.82	-0.5
3,228,940	-		Pf6N2E2_2736	0.82	-1.0
3,229,049	-				-1.4
3,229,196	+		Pf6N2E2_2737	0.27	-0.5
3,229,197	-		Pf6N2E2_2737	0.27	-0.1
3,229,197	-		Pf6N2E2_2737	0.27	+2.5
3,229,210	-		Pf6N2E2_2737	0.29	-0.7
3,229,210	-		Pf6N2E2_2737	0.29	-0.7
3,229,212	+		Pf6N2E2_2737	0.29	-0.4
3,229,212	+		Pf6N2E2_2737	0.29	+0.5
3,229,213	-		Pf6N2E2_2737	0.29	-0.8
3,229,275	+		Pf6N2E2_2737	0.38	-0.1
3,229,276	-		Pf6N2E2_2737	0.38	-0.8
3,229,276	-		Pf6N2E2_2737	0.38	-0.1
3,229,276	-		Pf6N2E2_2737	0.38	-1.0
3,229,377	+		Pf6N2E2_2737	0.52	-0.8
3,229,377	+		Pf6N2E2_2737	0.52	-0.5
3,229,377	+		Pf6N2E2_2737	0.52	-0.2
3,229,377	+		Pf6N2E2_2737	0.52	-0.3
3,229,378	-		Pf6N2E2_2737	0.52	+0.5
3,229,609	+		Pf6N2E2_2737	0.85	-0.1
3,229,665	+				-0.4
3,229,666	-				+0.7
3,229,736	+				-0.5
3,229,736	+				-0.8
3,229,736	+				+1.0
3,229,736	+				-0.6
3,229,736	+				+0.1
3,229,737	-				+0.5
3,229,737	-				-1.0
3,229,781	+				+1.5
3,229,782	-				-1.6
3,229,782	-				-0.1
3,229,782	-				-1.3
3,229,782	-				+2.1
3,229,796	+				+1.5
3,229,796	+				-0.1
3,229,869	-		Pf6N2E2_2738	0.15	+0.5
3,229,882	+		Pf6N2E2_2738	0.17	-0.3
3,229,883	-		Pf6N2E2_2738	0.17	-0.2
3,229,906	+		Pf6N2E2_2738	0.19	+0.7
3,229,907	-		Pf6N2E2_2738	0.19	+0.1
3,229,958	+		Pf6N2E2_2738	0.25	+1.5
3,229,958	+		Pf6N2E2_2738	0.25	+1.5
3,229,958	+		Pf6N2E2_2738	0.25	+0.3
3,229,959	-		Pf6N2E2_2738	0.25	-0.7
3,229,959	-		Pf6N2E2_2738	0.25	-0.2
3,229,959	-		Pf6N2E2_2738	0.25	-0.3
3,229,968	+		Pf6N2E2_2738	0.26	+0.1
3,229,968	+		Pf6N2E2_2738	0.26	+0.2
3,229,969	-		Pf6N2E2_2738	0.26	+0.0
3,230,072	+		Pf6N2E2_2738	0.36	+0.2
3,230,072	+		Pf6N2E2_2738	0.36	-0.2
3,230,073	-		Pf6N2E2_2738	0.36	-0.5
3,230,073	-		Pf6N2E2_2738	0.36	-0.2
3,230,073	-		Pf6N2E2_2738	0.36	+0.6
3,230,073	-		Pf6N2E2_2738	0.36	+0.4
3,230,081	+		Pf6N2E2_2738	0.37	-0.2
3,230,081	+		Pf6N2E2_2738	0.37	-0.4
3,230,081	+		Pf6N2E2_2738	0.37	-0.0
3,230,081	+		Pf6N2E2_2738	0.37	-0.3
3,230,082	-		Pf6N2E2_2738	0.37	-0.2
3,230,082	-		Pf6N2E2_2738	0.37	-0.6
3,230,082	-		Pf6N2E2_2738	0.37	+0.5
3,230,099	-		Pf6N2E2_2738	0.39	-0.9
3,230,224	-		Pf6N2E2_2738	0.52	+1.4
3,230,237	+		Pf6N2E2_2738	0.53	+0.8
3,230,625	-				+2.5
3,230,625	-				+0.5
3,230,625	-				+0.6
3,230,651	-				+2.5
3,230,693	+				+1.3
3,230,693	+				-0.1
3,230,694	-				+0.3
3,230,694	-				-2.7
3,230,694	-				-0.5
3,230,706	+				-0.1
3,230,706	+				-0.1
3,230,706	+				+0.1
3,230,708	+				-0.2
3,230,708	+				+0.3
3,230,708	+				-1.9