Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2218

Experiment: Nitrate reduction, replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate B
2,629,030	-		Pf6N2E2_2217	0.57	-0.5
2,629,030	-		Pf6N2E2_2217	0.57	-1.1
2,629,063	-		Pf6N2E2_2217	0.60	-1.5
2,629,063	-		Pf6N2E2_2217	0.60	-2.2
2,629,300	-		Pf6N2E2_2217	0.78	-2.6
2,629,300	-		Pf6N2E2_2217	0.78	-1.5
2,629,300	-		Pf6N2E2_2217	0.78	-1.1
2,629,348	-		Pf6N2E2_2217	0.82	-1.2
2,629,390	+		Pf6N2E2_2217	0.85	-1.5
2,629,536	+				-2.2
2,629,537	-				-1.8
2,629,676	+				-0.5
2,630,048	+		Pf6N2E2_2218	0.56	+1.5
2,630,093	+		Pf6N2E2_2218	0.63	-1.6
2,630,093	+		Pf6N2E2_2218	0.63	+0.5
2,630,093	+		Pf6N2E2_2218	0.63	+1.5
2,630,093	+		Pf6N2E2_2218	0.63	-1.1
2,630,093	+		Pf6N2E2_2218	0.63	-1.9
2,630,094	-		Pf6N2E2_2218	0.63	-1.5
2,630,094	-		Pf6N2E2_2218	0.63	-0.8
2,630,094	-		Pf6N2E2_2218	0.63	-1.3
2,630,094	-		Pf6N2E2_2218	0.63	-2.3
2,630,094	-		Pf6N2E2_2218	0.63	+0.2
2,630,094	-		Pf6N2E2_2218	0.63	+0.5
2,630,165	+		Pf6N2E2_2218	0.74	-2.7
2,630,219	+		Pf6N2E2_2218	0.83	-1.9
2,630,219	+		Pf6N2E2_2218	0.83	-0.1
2,630,220	-		Pf6N2E2_2218	0.83	-2.4
2,630,220	-		Pf6N2E2_2218	0.83	-1.6
2,630,349	+				+1.5
2,630,349	+				-1.5
2,630,350	-				-1.0
2,630,354	-				+0.3
2,630,354	-				+0.1
2,630,354	-				-0.1
2,630,354	-				+0.4
2,630,354	-				-3.0
2,630,365	-				-0.1
2,630,371	-				+0.7
2,630,393	-				-0.3
2,630,403	-				+0.5
2,630,466	-				+1.5
2,630,466	-				+2.5
2,630,509	-				+1.5
2,630,571	-		Pf6N2E2_2219	0.11	+1.5
2,631,072	-		Pf6N2E2_2219	0.50	+1.5