Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2180

Experiment: Nitrate reduction, replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate B
2,584,192	-		Pf6N2E2_2179	0.38	-0.4
2,584,192	-		Pf6N2E2_2179	0.38	-1.6
2,584,251	+		Pf6N2E2_2179	0.42	-1.0
2,584,683	+		Pf6N2E2_2179	0.74	+0.5
2,584,683	+		Pf6N2E2_2179	0.74	-0.1
2,584,684	-		Pf6N2E2_2179	0.74	-2.0
2,584,696	-		Pf6N2E2_2179	0.75	-0.6
2,584,696	-		Pf6N2E2_2179	0.75	-3.2
2,584,728	+		Pf6N2E2_2179	0.78	+0.8
2,584,729	-		Pf6N2E2_2179	0.78	+0.1
2,584,824	+		Pf6N2E2_2179	0.85	+0.2
2,584,824	+		Pf6N2E2_2179	0.85	+2.1
2,584,908	+				-0.2
2,584,908	+				+1.0
2,584,908	+				-0.4
2,584,908	+				+1.5
2,584,908	+				+0.5
2,584,908	+				+1.3
2,584,908	+				+0.1
2,584,908	+				+0.4
2,584,909	-				-0.5
2,584,968	+				+0.8
2,584,968	+				+0.5
2,584,968	+				+0.2
2,585,065	+				+0.7
2,585,065	+				+0.1
2,585,065	+				+0.1
2,585,065	+				-0.0
2,585,065	+				-0.7
2,585,066	-				-2.7
2,585,151	+				-2.1
2,585,167	-				+0.0
2,585,167	-				+0.9
2,585,388	-		Pf6N2E2_2180	0.24	-1.9
2,585,402	+		Pf6N2E2_2180	0.26	-0.7
2,585,781	-		Pf6N2E2_2180	0.63	-1.7
2,585,781	-		Pf6N2E2_2180	0.63	-2.0
2,585,781	-		Pf6N2E2_2180	0.63	-1.2
2,585,781	-		Pf6N2E2_2180	0.63	-2.3
2,585,888	+		Pf6N2E2_2180	0.73	-0.3
2,585,888	+				+1.5
2,585,889	-		Pf6N2E2_2180	0.74	-2.4
2,585,889	-		Pf6N2E2_2180	0.74	-1.3
2,585,896	+				-0.8
2,586,038	+		Pf6N2E2_2180	0.88	-1.6
2,586,153	+				-1.7
2,586,201	+				+0.1
2,586,201	+				+0.4
2,586,201	+				-0.1
2,586,201	+				-0.6
2,586,202	-				-1.0
2,586,202	-				-1.1
2,586,202	-				-1.2
2,586,202	-				-1.0
2,586,202	-				+0.5
2,586,202	-				-0.9
2,586,472	-				+1.5
2,586,472	-		Pf6N2E2_2181	0.24	-1.5
2,586,477	+		Pf6N2E2_2181	0.25	-0.6
2,586,850	-		Pf6N2E2_2181	0.61	-1.5