Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2176

Experiment: Nitrate reduction, replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate B
2,579,881	+				+1.5
2,579,881	+				+0.7
2,579,881	+				+0.0
2,579,882	-				+0.0
2,579,882	-				+0.1
2,579,923	+				+2.5
2,579,924	-				+1.5
2,579,924	-				-0.5
2,579,942	-				-0.2
2,579,942	-				-0.0
2,579,942	-				-1.5
2,579,951	+				+0.8
2,579,955	+				-0.3
2,579,955	+				-0.0
2,579,956	-				-1.5
2,579,956	-				-0.1
2,579,959	+				+0.1
2,579,960	-				-1.0
2,579,975	+				+1.0
2,579,976	-				-0.7
2,580,418	+		Pf6N2E2_2175	0.47	-0.3
2,580,418	+		Pf6N2E2_2175	0.47	+1.8
2,580,418	+		Pf6N2E2_2175	0.47	+0.0
2,580,459	+		Pf6N2E2_2175	0.52	-0.0
2,580,459	+		Pf6N2E2_2175	0.52	-0.2
2,580,660	+		Pf6N2E2_2175	0.75	+0.4
2,580,867	+				-1.8
2,580,867	+				+0.1
2,581,008	-		Pf6N2E2_2176	0.21	-0.8
2,581,277	+		Pf6N2E2_2176	0.63	-1.5
2,581,412	+		Pf6N2E2_2176	0.84	+0.5
2,581,413	-		Pf6N2E2_2176	0.84	-2.8
2,581,457	+				-1.2
2,581,633	+				-0.5
2,581,633	+				-1.2
2,581,634	-				-0.8
2,581,634	-				-1.4
2,581,634	-				-0.3
2,581,721	-		Pf6N2E2_2177	0.15	-1.5
2,581,807	-		Pf6N2E2_2177	0.22	-1.2
2,582,092	+		Pf6N2E2_2177	0.43	-1.3
2,582,151	-		Pf6N2E2_2177	0.47	-0.7
2,582,353	+		Pf6N2E2_2177	0.62	-0.5
2,582,398	+		Pf6N2E2_2177	0.65	-0.3
2,582,434	+		Pf6N2E2_2177	0.68	-0.5
2,582,434	+		Pf6N2E2_2177	0.68	+0.0
2,582,434	+		Pf6N2E2_2177	0.68	+0.0
2,582,435	-		Pf6N2E2_2177	0.68	-1.0
2,582,435	-		Pf6N2E2_2177	0.68	-0.8
2,582,435	-		Pf6N2E2_2177	0.68	-1.4
2,582,435	-		Pf6N2E2_2177	0.68	-1.7