Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1812

Experiment: Nitrate reduction, replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate B
2,143,271	+				-1.0
2,143,272	-				-0.0
2,143,272	-				-1.0
2,143,307	+				-0.7
2,143,436	+		Pf6N2E2_1811	0.18	+0.2
2,143,437	-		Pf6N2E2_1811	0.18	-0.7
2,143,508	+		Pf6N2E2_1811	0.26	-0.3
2,143,508	+		Pf6N2E2_1811	0.26	+0.5
2,143,508	+		Pf6N2E2_1811	0.26	-0.9
2,143,672	+		Pf6N2E2_1811	0.44	-1.1
2,143,680	-		Pf6N2E2_1811	0.45	-0.0
2,143,848	-		Pf6N2E2_1811	0.64	+1.2
2,144,055	-		Pf6N2E2_1811	0.86	+1.5
2,144,055	-		Pf6N2E2_1811	0.86	-0.9
2,144,055	-		Pf6N2E2_1811	0.86	+2.1
2,144,055	-		Pf6N2E2_1811	0.86	+0.2
2,144,055	-		Pf6N2E2_1811	0.86	-0.5
2,144,055	-		Pf6N2E2_1811	0.86	-0.1
2,144,190	+				-0.1
2,144,190	+				-0.9
2,144,190	+				-0.5
2,144,191	-				+0.5
2,144,191	-				-0.7
2,144,191	-				-0.6
2,144,194	-				+0.4
2,144,194	-				+0.7
2,144,194	-				-0.5
2,144,215	+				-0.7
2,144,216	-				+0.1
2,144,539	-		Pf6N2E2_1812	0.33	-1.0
2,144,539	-		Pf6N2E2_1812	0.33	-1.3
2,144,904	+		Pf6N2E2_1812	0.68	+1.5
2,144,905	-		Pf6N2E2_1812	0.69	+1.5
2,144,905	-		Pf6N2E2_1812	0.69	-1.2
2,144,967	+		Pf6N2E2_1812	0.75	-0.2
2,144,990	+		Pf6N2E2_1812	0.77	-1.5
2,145,403	-		Pf6N2E2_1813	0.18	+0.9
2,145,518	+		Pf6N2E2_1813	0.30	+1.5
2,145,518	+		Pf6N2E2_1813	0.30	+0.0
2,145,836	+		Pf6N2E2_1813	0.62	-0.5
2,145,837	-		Pf6N2E2_1813	0.62	+0.5
2,145,837	-		Pf6N2E2_1813	0.62	-0.4
2,145,837	-		Pf6N2E2_1813	0.62	+0.1
2,145,837	-		Pf6N2E2_1813	0.62	+1.0
2,145,841	-		Pf6N2E2_1813	0.63	-0.7
2,145,900	-		Pf6N2E2_1813	0.69	+2.8
2,145,940	-		Pf6N2E2_1813	0.73	+0.3
2,145,962	+		Pf6N2E2_1813	0.75	+1.0
2,145,963	-		Pf6N2E2_1813	0.75	+0.8