Experiment: Maltitol 20mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0430 and BT0431 are separated by 80 nucleotides BT0431 and BT0432 are separated by 104 nucleotides
BT0430: BT0430 - indolepyruvate oxidoreductase subunit iorA (NCBI ptt file), at 516,457 to 518,049
BT0430
BT0431: BT0431 - conserved hypothetical protein with conserved domain (NCBI ptt file), at 518,130 to 519,167
BT0431
BT0432: BT0432 - putative endonuclease BB0411 (NCBI ptt file), at 519,272 to 520,150
BT0432
Position (kb) 518
519
520 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 517.151 kb on + strand, within BT0430 at 517.363 kb on + strand, within BT0430 at 517.367 kb on + strand, within BT0430 at 517.368 kb on - strand, within BT0430 at 517.612 kb on + strand, within BT0430 at 517.613 kb on - strand, within BT0430 at 517.613 kb on - strand, within BT0430 at 517.623 kb on - strand, within BT0430 at 517.676 kb on + strand, within BT0430 at 517.676 kb on + strand, within BT0430 at 517.804 kb on + strand, within BT0430 at 517.804 kb on + strand, within BT0430 at 517.849 kb on - strand, within BT0430 at 517.896 kb on + strand at 517.935 kb on + strand at 517.978 kb on + strand at 517.978 kb on + strand at 517.978 kb on + strand at 517.978 kb on + strand at 517.979 kb on - strand at 517.979 kb on - strand at 518.052 kb on - strand at 518.254 kb on + strand, within BT0431 at 518.275 kb on - strand, within BT0431 at 518.278 kb on - strand, within BT0431 at 518.339 kb on + strand, within BT0431 at 518.341 kb on + strand, within BT0431 at 518.341 kb on + strand, within BT0431 at 518.342 kb on - strand, within BT0431 at 518.342 kb on - strand, within BT0431 at 518.445 kb on - strand, within BT0431 at 518.919 kb on - strand, within BT0431 at 519.030 kb on + strand, within BT0431 at 519.037 kb on - strand, within BT0431 at 519.037 kb on - strand, within BT0431 at 519.037 kb on - strand, within BT0431 at 519.085 kb on + strand at 519.086 kb on - strand at 519.270 kb on + strand at 519.271 kb on - strand at 519.321 kb on - strand at 519.390 kb on + strand, within BT0432 at 519.407 kb on + strand, within BT0432 at 519.426 kb on + strand, within BT0432 at 519.428 kb on + strand, within BT0432 at 519.649 kb on + strand, within BT0432 at 519.989 kb on + strand, within BT0432 at 520.003 kb on + strand, within BT0432 at 520.004 kb on - strand, within BT0432 at 520.020 kb on + strand, within BT0432 at 520.032 kb on + strand, within BT0432 at 520.039 kb on - strand, within BT0432 at 520.060 kb on + strand, within BT0432 at 520.081 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Maltitol 20mM (C) remove 517,151 + BT0430 0.44 +0.4 517,363 + BT0430 0.57 -0.4 517,367 + BT0430 0.57 +0.4 517,368 - BT0430 0.57 +0.6 517,612 + BT0430 0.73 -0.9 517,613 - BT0430 0.73 +0.1 517,613 - BT0430 0.73 +0.8 517,623 - BT0430 0.73 +0.1 517,676 + BT0430 0.77 -2.8 517,676 + BT0430 0.77 +0.4 517,804 + BT0430 0.85 +1.0 517,804 + BT0430 0.85 +1.6 517,849 - BT0430 0.87 -3.0 517,896 + -0.2 517,935 + -1.0 517,978 + -1.0 517,978 + -0.0 517,978 + +0.2 517,978 + -2.3 517,979 - -1.8 517,979 - +2.0 518,052 - +1.1 518,254 + BT0431 0.12 -0.6 518,275 - BT0431 0.14 +0.2 518,278 - BT0431 0.14 -1.4 518,339 + BT0431 0.20 -1.9 518,341 + BT0431 0.20 -1.1 518,341 + BT0431 0.20 -2.4 518,342 - BT0431 0.20 -0.8 518,342 - BT0431 0.20 +0.2 518,445 - BT0431 0.30 -1.7 518,919 - BT0431 0.76 -0.0 519,030 + BT0431 0.87 -2.6 519,037 - BT0431 0.87 -1.4 519,037 - BT0431 0.87 -2.0 519,037 - BT0431 0.87 -0.7 519,085 + -1.2 519,086 - +0.6 519,270 + -0.6 519,271 - +1.1 519,321 - +0.9 519,390 + BT0432 0.13 +0.1 519,407 + BT0432 0.15 -0.6 519,426 + BT0432 0.18 -0.0 519,428 + BT0432 0.18 +0.8 519,649 + BT0432 0.43 -1.0 519,989 + BT0432 0.82 -0.6 520,003 + BT0432 0.83 -1.5 520,004 - BT0432 0.83 +0.0 520,020 + BT0432 0.85 +0.4 520,032 + BT0432 0.86 -1.1 520,039 - BT0432 0.87 +0.1 520,060 + BT0432 0.90 -1.9 520,081 + +0.3
Or see this region's nucleotide sequence