Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_933

Experiment: Nitrate reduction, replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate A
1,098,516	-		Pf6N2E2_932	0.54	+0.1
1,098,516	-		Pf6N2E2_932	0.54	+0.2
1,098,516	-		Pf6N2E2_932	0.54	+0.6
1,098,560	-		Pf6N2E2_932	0.58	-0.5
1,098,560	-		Pf6N2E2_932	0.58	-0.7
1,098,608	+				-0.1
1,098,609	-		Pf6N2E2_932	0.62	+0.1
1,098,665	-		Pf6N2E2_932	0.67	+0.4
1,098,746	+		Pf6N2E2_932	0.73	-1.1
1,098,747	-		Pf6N2E2_932	0.73	-0.2
1,098,747	-		Pf6N2E2_932	0.73	+0.1
1,098,989	+				+0.3
1,098,993	+				-1.3
1,099,109	+				+1.5
1,099,110	-				+0.3
1,099,169	+				-0.3
1,099,259	-				+3.1
1,099,260	+				+0.3
1,099,261	-				-0.6
1,099,261	-				-2.0
1,099,261	-				-1.0
1,099,261	-				-0.5
1,099,277	+				+0.5
1,099,396	+				-0.3
1,099,397	-				+0.2
1,099,534	-				-1.0
1,099,534	-				+0.3
1,099,545	+				+0.7
1,099,556	+				+0.4
1,099,557	-				-0.5
1,099,620	+		Pf6N2E2_933	0.17	+0.1
1,099,620	+		Pf6N2E2_933	0.17	-0.6
1,099,621	-		Pf6N2E2_933	0.18	-0.1
1,099,621	-		Pf6N2E2_933	0.18	-1.1
1,099,650	-		Pf6N2E2_933	0.22	+1.5
1,099,825	+		Pf6N2E2_933	0.50	-0.7
1,099,889	+		Pf6N2E2_933	0.61	-1.0
1,099,889	+		Pf6N2E2_933	0.61	-0.9
1,100,118	+				+0.1
1,100,119	-				-0.2
1,100,119	-				-0.6
1,100,119	-				+0.7
1,100,119	-				+0.1
1,100,119	-				+0.3
1,100,288	+				+1.5
1,100,289	-				-0.7
1,100,289	-				+0.1
1,100,427	-				-1.5
1,100,469	-				+0.5
1,100,648	-				-0.3
1,100,704	+				+0.5
1,100,830	+				+1.5
1,100,830	+				+0.1
1,100,830	+				+1.2
1,100,830	+				-1.3
1,100,831	-				+0.5
1,100,831	-				-0.2
1,100,831	-				+1.5
1,100,831	-				+1.5
1,100,831	-				+0.6
1,100,831	-				-2.3
1,100,831	-				+0.8
1,100,831	-				-1.2
1,100,880	+				+1.5
1,101,044	-				+1.5
1,101,106	-				+0.3