Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_863

Experiment: Nitrate reduction, replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate A
1,010,935	+		Pf6N2E2_862	0.41	+1.5
1,010,959	+		Pf6N2E2_862	0.43	+1.3
1,010,959	+		Pf6N2E2_862	0.43	-0.5
1,010,960	-		Pf6N2E2_862	0.43	-0.7
1,010,960	-		Pf6N2E2_862	0.43	+2.5
1,010,972	+		Pf6N2E2_862	0.44	+0.2
1,011,493	+		Pf6N2E2_862	0.88	-1.5
1,011,493	+		Pf6N2E2_862	0.88	-0.6
1,011,493	+		Pf6N2E2_862	0.88	+0.2
1,011,494	-		Pf6N2E2_862	0.88	+0.3
1,011,557	+				-0.4
1,011,557	+				-0.6
1,011,557	+				-0.5
1,011,557	+				-0.4
1,011,558	-				+0.5
1,011,632	+				-0.4
1,011,632	+				+0.1
1,011,632	+				-0.5
1,011,632	+				-0.4
1,011,633	-				+0.5
1,011,636	+				+0.3
1,011,637	-				-0.5
1,011,637	-				-0.4
1,011,637	-				+0.5
1,011,702	+				+0.2
1,011,703	-				+0.2
1,011,738	+				-0.3
1,011,738	+				+0.0
1,011,829	-				-1.6
1,011,829	-				+0.2
1,011,829	-				-1.5
1,011,829	-				+0.5
1,011,831	+				+0.8
1,011,832	-				-0.2
1,011,832	-				-0.7
1,011,832	-				-0.0
1,011,907	+				+0.2
1,011,907	+				+0.4
1,011,907	+				-0.8
1,011,907	+				+1.5
1,011,908	-				-0.7
1,011,908	-				+1.3
1,011,908	-				-0.5
1,011,908	-				+1.5
1,012,151	+		Pf6N2E2_863	0.28	-1.3
1,012,151	+		Pf6N2E2_863	0.28	-0.6
1,012,151	+		Pf6N2E2_863	0.28	-0.3
1,012,151	+		Pf6N2E2_863	0.28	-0.2
1,012,151	+		Pf6N2E2_863	0.28	+1.5
1,012,293	+		Pf6N2E2_863	0.46	-1.6
1,012,293	+		Pf6N2E2_863	0.46	-2.0
1,012,293	+		Pf6N2E2_863	0.46	-1.2
1,012,293	+		Pf6N2E2_863	0.46	-0.4
1,012,293	+		Pf6N2E2_863	0.46	-2.4
1,012,293	+		Pf6N2E2_863	0.46	-1.8
1,012,293	+		Pf6N2E2_863	0.46	-2.7
1,012,293	+		Pf6N2E2_863	0.46	-3.5
1,012,293	+		Pf6N2E2_863	0.46	-1.3
1,012,293	+		Pf6N2E2_863	0.46	-0.2
1,012,293	+		Pf6N2E2_863	0.46	-0.8
1,012,293	+		Pf6N2E2_863	0.46	-0.9
1,012,297	+		Pf6N2E2_863	0.46	-0.9
1,012,504	+		Pf6N2E2_863	0.72	-0.0
1,012,636	+		Pf6N2E2_863	0.88	-0.4
1,012,636	+		Pf6N2E2_863	0.88	-0.1
1,012,724	+				-1.6
1,012,724	+				+0.5
1,012,725	-				-0.7
1,012,892	-		Pf6N2E2_864	0.21	-0.1
1,012,892	-		Pf6N2E2_864	0.21	+0.2
1,012,892	-		Pf6N2E2_864	0.21	+0.1
1,012,965	+		Pf6N2E2_864	0.30	-0.4
1,012,965	+		Pf6N2E2_864	0.30	+1.5
1,012,966	-		Pf6N2E2_864	0.30	-0.3
1,012,982	-		Pf6N2E2_864	0.32	-0.7
1,012,982	-		Pf6N2E2_864	0.32	+0.5
1,012,982	-		Pf6N2E2_864	0.32	-0.9
1,013,085	+		Pf6N2E2_864	0.45	+0.4
1,013,086	-		Pf6N2E2_864	0.45	+1.2
1,013,155	-		Pf6N2E2_864	0.54	+1.5
1,013,156	+		Pf6N2E2_864	0.54	+0.4
1,013,156	+		Pf6N2E2_864	0.54	-0.1
1,013,157	-		Pf6N2E2_864	0.54	+0.9
1,013,157	-		Pf6N2E2_864	0.54	-1.1
1,013,157	-		Pf6N2E2_864	0.54	-1.2
1,013,157	-		Pf6N2E2_864	0.54	-0.9
1,013,204	-		Pf6N2E2_864	0.60	-0.5
1,013,222	-		Pf6N2E2_864	0.62	+2.7
1,013,379	-		Pf6N2E2_864	0.82	-0.5
1,013,427	+		Pf6N2E2_864	0.88	-0.9
1,013,427	+		Pf6N2E2_864	0.88	-0.1
1,013,427	+		Pf6N2E2_864	0.88	+0.6
1,013,428	-		Pf6N2E2_864	0.88	-0.1
1,013,537	-				+1.5
1,013,537	-				+0.5