Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_71

Experiment: Nitrate reduction, replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate A
112,569	+				+0.6
112,569	+				-1.7
112,569	+				-0.7
112,570	-				-0.0
112,570	-				+0.5
112,571	+				-0.8
112,571	+				-0.1
112,571	+				+1.0
112,571	+				-0.6
112,571	+				-0.1
112,571	+				-0.0
112,571	+				-0.4
112,572	-				+0.6
112,572	-				-0.5
112,572	-				-1.4
112,572	-				-0.1
112,589	-				-0.8
112,589	-				-0.6
112,603	+				-0.2
112,620	+				+1.4
112,620	+				+0.4
112,621	-				+0.2
112,682	+				-1.9
112,683	-				+0.8
112,991	+		Pf6N2E2_70	0.45	-2.9
112,992	-		Pf6N2E2_70	0.45	+0.4
112,992	-		Pf6N2E2_70	0.45	-2.4
113,000	+		Pf6N2E2_70	0.46	-1.9
113,000	+		Pf6N2E2_70	0.46	-0.7
113,001	-		Pf6N2E2_70	0.46	-0.0
113,370	-		Pf6N2E2_70	0.89	-0.4
113,370	-		Pf6N2E2_70	0.89	-0.8
113,376	+		Pf6N2E2_70	0.90	+0.4
113,417	+				-0.6
113,417	+				-0.0
113,624	+		Pf6N2E2_71	0.15	-2.0
113,745	+		Pf6N2E2_71	0.34	-2.3
113,745	+		Pf6N2E2_71	0.34	-3.0
113,825	+		Pf6N2E2_71	0.47	-3.3
113,826	-		Pf6N2E2_71	0.47	-2.8
113,915	+		Pf6N2E2_71	0.61	-3.5
113,915	+		Pf6N2E2_71	0.61	-3.0
113,915	+		Pf6N2E2_71	0.61	-4.5
113,916	-		Pf6N2E2_71	0.61	-1.9
113,916	-		Pf6N2E2_71	0.61	-2.8
114,053	+		Pf6N2E2_71	0.83	-2.1
114,053	+		Pf6N2E2_71	0.83	-2.2
114,196	+				+1.4
114,196	+				-0.9