Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5779

Experiment: Nitrate reduction, replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate A
6,595,399	+				-0.7
6,595,399	+				+1.2
6,595,399	+				+0.0
6,595,400	-				+1.4
6,595,400	-				+0.1
6,595,400	-				-0.1
6,595,405	+				+0.3
6,595,405	+				-0.0
6,595,405	+				+1.0
6,595,406	-				+0.9
6,595,450	+				-0.3
6,595,451	-				+0.7
6,595,546	-				+2.0
6,595,550	-				+1.8
6,595,552	+				-0.1
6,595,562	-				+0.1
6,595,573	+				+0.4
6,595,573	+				+0.1
6,595,573	+				-0.0
6,595,574	-				+1.4
6,595,579	+				+0.1
6,595,579	+				-0.6
6,595,612	-				-1.1
6,595,716	+				+0.4
6,595,716	+				-0.3
6,595,716	+				-0.7
6,595,717	-				+2.4
6,595,739	+				+0.1
6,595,851	+				-0.3
6,595,874	+				-0.6
6,595,912	+				-1.2
6,595,916	+				+0.4
6,595,936	+				+0.6
6,595,939	+				-0.9
6,595,939	+				+0.1
6,595,939	+				+0.2
6,595,939	+				-0.2
6,595,945	+				+1.4
6,595,979	+				+0.3
6,595,979	+				+0.0
6,596,007	+				+0.6
6,596,008	-				+0.2
6,596,079	+				+1.3
6,596,079	+				+0.1
6,596,080	-				+0.2
6,596,080	-				+0.7
6,596,104	+				-0.6
6,596,104	+				+0.2
6,596,105	-				+1.0
6,596,198	+				-0.1
6,596,199	-				+1.4
6,596,199	-				-0.3
6,596,199	-				-0.9
6,596,216	-				+0.2
6,596,330	-				+0.9
6,596,330	-				+0.1
6,596,386	+				+0.5
6,596,386	+				-1.2
6,596,387	-				+0.1
6,596,387	-				+0.3
6,596,387	-				-1.2
6,596,387	-				+0.4
6,596,534	+		Pf6N2E2_5779	0.12	+1.0
6,596,555	+		Pf6N2E2_5779	0.13	+0.9
6,596,572	-		Pf6N2E2_5779	0.14	+0.0
6,596,572	-		Pf6N2E2_5779	0.14	+1.0
6,596,587	+		Pf6N2E2_5779	0.14	+0.3
6,596,776	+		Pf6N2E2_5779	0.25	+1.2
6,596,776	+		Pf6N2E2_5779	0.25	-1.0
6,596,776	+		Pf6N2E2_5779	0.25	-0.3
6,596,776	+		Pf6N2E2_5779	0.25	-0.3
6,596,776	+		Pf6N2E2_5779	0.25	-0.6
6,596,777	-		Pf6N2E2_5779	0.25	-0.0
6,596,777	-		Pf6N2E2_5779	0.25	-0.2
6,596,777	-		Pf6N2E2_5779	0.25	-0.2
6,596,777	-		Pf6N2E2_5779	0.25	+0.1
6,596,777	-		Pf6N2E2_5779	0.25	-0.6
6,596,777	-		Pf6N2E2_5779	0.25	+0.0
6,596,777	-		Pf6N2E2_5779	0.25	-2.0
6,596,777	-		Pf6N2E2_5779	0.25	-0.6
6,596,777	-		Pf6N2E2_5779	0.25	-0.6
6,596,777	-		Pf6N2E2_5779	0.25	-1.9
6,596,777	-		Pf6N2E2_5779	0.25	+1.4
6,596,777	-		Pf6N2E2_5779	0.25	-0.2
6,596,815	+		Pf6N2E2_5779	0.27	+1.7
6,596,815	+		Pf6N2E2_5779	0.27	-0.2
6,596,815	+		Pf6N2E2_5779	0.27	+0.7
6,596,815	+		Pf6N2E2_5779	0.27	+2.7
6,596,815	+		Pf6N2E2_5779	0.27	+0.3
6,596,815	+		Pf6N2E2_5779	0.27	+0.6
6,596,816	-		Pf6N2E2_5779	0.27	-0.0
6,596,816	-		Pf6N2E2_5779	0.27	+1.0
6,596,875	-		Pf6N2E2_5779	0.31	+0.6
6,596,977	+		Pf6N2E2_5779	0.36	+1.4
6,596,977	+		Pf6N2E2_5779	0.36	+0.7
6,596,977	+		Pf6N2E2_5779	0.36	-0.2
6,596,977	+		Pf6N2E2_5779	0.36	+1.2
6,596,977	+		Pf6N2E2_5779	0.36	+1.4
6,596,977	+		Pf6N2E2_5779	0.36	-0.8
6,596,978	-		Pf6N2E2_5779	0.36	+0.1
6,596,978	-		Pf6N2E2_5779	0.36	+0.1
6,596,978	-		Pf6N2E2_5779	0.36	+1.0
6,596,978	-		Pf6N2E2_5779	0.36	-0.3
6,596,978	-		Pf6N2E2_5779	0.36	-0.6
6,596,978	-		Pf6N2E2_5779	0.36	+0.1
6,596,978	-		Pf6N2E2_5779	0.36	-0.9
6,596,978	-		Pf6N2E2_5779	0.36	+0.8
6,597,415	+		Pf6N2E2_5779	0.61	-0.5
6,597,415	+		Pf6N2E2_5779	0.61	+0.4
6,597,595	+		Pf6N2E2_5779	0.71	-0.8
6,597,595	+		Pf6N2E2_5779	0.71	+0.8
6,597,634	+		Pf6N2E2_5779	0.73	+1.0
6,597,912	+		Pf6N2E2_5779	0.89	+0.5
6,597,913	-		Pf6N2E2_5779	0.89	-1.2
6,597,913	-		Pf6N2E2_5779	0.89	+0.1
6,597,913	-		Pf6N2E2_5779	0.89	-0.2
6,597,913	-		Pf6N2E2_5779	0.89	-1.6
6,597,913	-		Pf6N2E2_5779	0.89	+0.1
6,597,951	+				-0.0
6,597,952	-				+2.2
6,598,007	-				-0.8
6,598,166	+				+0.4
6,598,167	-				-0.0
6,598,167	-				-0.3
6,598,268	+				-1.1
6,598,302	-				+0.1
6,598,856	+		Pf6N2E2_5780	0.29	-0.9
6,598,856	+		Pf6N2E2_5780	0.29	-1.2
6,598,934	+		Pf6N2E2_5780	0.33	-1.6
6,598,934	+		Pf6N2E2_5780	0.33	-1.9
6,598,934	+		Pf6N2E2_5780	0.33	-1.1
6,598,935	-		Pf6N2E2_5780	0.33	-0.0
6,598,935	-		Pf6N2E2_5780	0.33	+1.4
6,598,935	-		Pf6N2E2_5780	0.33	+0.6